These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1061 fasta sequence [CGGACGCATCACGAAGAGCGGGAAAGACTAATAAATGAATTGAGAAAGAAATGCTTTATAATCCAACCACACATAGAGAAAAGTTAAATTCAGAGCTTCGTTTAAGACTTATGTATGATAGGTATTTTGATGTAACACAAGAACTAAGAGATCTGTATGAAGATAAAGATGGTCTACGTAAGGCTGATATACAAACACTTTCCGGTCCAAATGAATTTAACGAGTTTTATGACAGATTAAAGCAAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA-GAAATATCTG-AATGTAAAAGGTGTTCCA----CGCATAGATTATCTCACTTATATCTCCTTCTT----CGACCGATTGTATGATATATC-TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA-GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACAGCCTGGGAAGAACTTGCTTCACTTGGACTTGATAGGCTTAAATCAGCGTTACTCGCGTTGGGCTTAAAATGTGGTGGAACTTTGGAGGAAAGAGCTCGTCGCTTATGGGCTACAAAAGGGAAATCACTCGAAGAGTTACCTGCAGATCTGTTTGTTACAAAACAACGCTCGACTAAAGGTTTCGCTAAGACAGCTGCATGGGGACATGTACCTCCAGCGCTATCTGAAAAGCTAAAAGAAATTGCTACGCTAGAGGCTAGGATATATAGACTCAGTGAACTGGTCAAAGAGCATCGCGAAGCTACTATTGAGAACGTACAACGTCGTCAGGCACGA] [+] EMBL CD064072 [CGGACGCATCACGAAGAGCGGGAAAGACTAATAAATGAATTGAGAAAGAAATGCTTTATAATCCAACCACACATAGAGAAAAGTTAAATTCAGAGCTTCGTTTAAGACTTATGTATGATAGGTATTTTGATGTAACACAAGAACTAAGAGATCTGTATGAAGATAAAGATGGTCTACGTAAGGCTGATATACAAACACTTTCCGGTCCAAATGAATTTAACGAGTTTTATGACAGATTAAAGCAAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTCTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AAT ] [+] EMBL CD115289 [ TAAAGCAAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACAGCCTGGGAAGAACTTGCTTCACTTGGACTTGATAGGCTTAAATCAGCGTTACTCGCGTTGGGCTT ] [+] EMBL CD087165 [ AAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTAACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCAGTAGCGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATTAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCCAGACCTATAGTGGATTTAGAATA GGAAACTAAAGATGCGCTTGCTAAATTTGAAAAACAATGG ] [+] EMBL CD087160 [ AAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTAACTTTTCAGATGAACAAGGCTATGGTCGTTATCTGGATTTACATaaggg ] [-] EMBL CD097686 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTCCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ] [-] EMBL CD097681 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ] [-] EMBL CD097707 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAGAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ] [-] EMBL CD097735 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ] [+] EMBL CD068867 [ ATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCT AATTTGAAA ] [-] EMBL CD097739 [ tgTGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ] [-] EMBL CD097740 [ tgTGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAAGGACATATCTGCAATGTGAAAGGTGTTCCA CGCATAGATTAT ] [+] EMBL CD068919 [ TGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCCTTAAATATATCACATATATCTCCTTCTTCNNCCGACCGATTGTATGATATATCNTCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCNAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCANCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTAANCCGt ] [+] EMBL CD165592 [ AAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGACGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCATGACAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACAGCCTGGGAAGAACTTGCTTTACTTGGACTTGATAGGCTTAAATCAGCGTTAC ] [+] EMBL CD183003 [ AAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCAGTAGCGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCCAGACCTATAGTGGATTTAGAAGAGGGAAACT AAGAGGCGCTT ] [-] EMBL CD183071 [ AAGAAATGAGAGAAAGNNCCGCAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCAGTAGCGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTG ] [+] EMBL CD153894 [ GTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACGGCCTGGGAAGAACTTGCTTCACTTGGACTTGATAGGCTTAAATCAGCGTTACTCGCGTTGGGCTTAAAATGTGGTGGAACTTTGGAGGAAAGAGCTCGTCGCTTATGGGCTACAAAAGGGAAATCACTCGAAGAGTTACCTGCAGATCTGTTTGTTACAAAACAACGCTCGACTAAAGGTTTCGCTAAGACAGCTGCATGGGGACATGTACCTCCAGCGCTATCTGAAAAGCTAAAAGAAATTGCTACGCTAGAGGCTAGGATATATAGACTCAGTGAACTGGTCAAAGAGCATCGCGAAGCTACTATTGAGAACGTACAACGTCGTCAGGCACGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||