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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1127 fasta sequence
[GGGCCATATTCGGCCGCAGCACAGTTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTGATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA-CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA-ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT-GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC-ATCGGCTGTTGTGTTGTG-TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC]
[+] EMBL CD081515 [GGGCCATATTCGGCCGCAGCACAGTTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTGATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGGTAAGAAACTGATCAAT ANATTGACTGGGAGACAC AAC AGACTCANTTGTTTTGGGGCTAGTC ATCGGCTGTTGNGTTGNN GTTCTGCTAA TTACCGC TC TTTGAG TATATACATATATATTAC TA TTTTTTAGGAGGTAG ACTGTGATG TTTGACT ATATC TGT ATTTC AATACG ATGA GTGCGTG GAG ATG ACATG A TTCTGCTA TGTATATATa ]
[+] EMBL CD081636 [gaGCCATATTCGGCCGAGGCACAGTTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTGATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTC ACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCAC GGTAAAAGAACTGATCAAT ANATNGACT GGAGACAC AAC AGACTCANTTGTTTT GGGCTAG C ATCCGCTG GTGNNGTGNGTTCTGCTAA TTACCGC TCTTTTGAG TAT TACA ATATATTAC TA TTTTTTAGGAGG AG ACTG GATG TTTGACT ATATCTGG ATTTC AATACG ATGA GTGC CGGGAG ATG ACAAG A TTCTGAT TTGAAAATAT ]
[+] EMBL CD094449 [ TTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTAATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAGCTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACT ]
[+] EMBL CD079277 [ CGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCTAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTNTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGT ]
[+] EMBL CD078668 [ GCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGC ]
[+] EMBL CD065232 [ TGACCTCAACG TAGCTGCTTTTGG NNAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGACACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATgggt ]
[-] EMBL CD061386 [ CCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCA ]
[-] EMBL CD061335 [ CCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGATACGGATGGCAACTTTTGTGCCTGAAACAGAAGCTACACCTACCTCTTTT ]
[-] EMBL CD061392 [ CCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTT ]
[+] EMBL CD194534 [ ATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGCAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAG ]
[+] EMBL AI977434 [ CACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAG ]
[+] EMBL AI977268 [ CACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTCAATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATAT ]
[-] EMBL CD075338 [ AACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC]
[-] EMBL CD073132 [ AAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC]
[-] EMBL CD075458 [ GCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC]
[-] EMBL CD077302 [ TTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||