cluster # 10503

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Schistosoma mansoni
cluster # 10503 cluster # 10503 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10503#0 length = 1451 sequences # 15

consensus_10503#1 length = 576 sequences # 2

consensusID : consensus_10503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1451
fasta sequence

                              [AAGAGTATTTTCTCTATTGACTGGATTATAAGCCAATACATTTATTTATACTATTACAAGTAAACAGACAGACAATTAAACAAACAATTAGGATCAGTAATAATCATAAAAGCCTATTTCCATTAAATTTAATTAACAAAAGTAAGTTGCTGAAACATTTATTAAGAAACAATAAACGTTAAACGATCAGGGTTTTTGCGATAAACATAACTGTTACATAAAAAGGCGAAAAATAAACTAGGATACGCTCTGACCTACTTTATTCAAATTGGATTCAAAATTGTCAGAATCATCAATGATAGGTGTTAAATGAATACCTGCAGATGTTGTCATTTTATCATTAGACACAGTTGTTTGATTAATACTACTACTAGTATTCTGATCCAACTTGTCACAAACATCTTTTGGCTCAACAGGAGATTTTTCAACAACAGAAATGTGCGTGAACAAATGTCGACCATTAATGGTCAATCGTGGCACACCGAAATAACCGTAGGCCGCTAATAACTGTGAATTGATATAATCTCGACTGACTTGAGTTAAATTCCTACAGAGATTATGTTTAGGGTTAAAAGGATCGGTAACTGTAAAACAACGCTTTTCAGGAGCATTGAAACATGGCACTGGTTCAGGTTCCACAATATTAATCGTACAAGAAGAAATTTTAAAATCAAATAAATAAAATCTGAGGAAACCAAGCCATAAATCAGCTAAACATGGTAAATTGTTAGACGAAGAGGAATATGGTTGATCAGGACATAATTTTCGAATTAATTCAATGTCTGTAATAAACGAACAATCAGTATTGGGTGGCAAAACCTGATGATAAGAATTTTCAGGAA-TTTATCAAGATGTTGGCGGTAAAGCATATGAAGATTTGGAAGTAATGGAGGTTCATAATGTTGTAAGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCCGGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCTTGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATC-CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG-AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA-GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGCC]

[+] EMBL CD196682             [AAGAGTATTTTCTCTATTGACTGGATTATAAGCCAATACATTTATTTATACTATTACAAGTAAACAGACAGACAATTAAACAAACAATTAGGATCAGTAATAATCATAAAAGCCTATTTCCATTAAATTTAATTAACAAAAGTAAGTTGCTGAAACATTTATTAAGAAACAATAAACGTTAAACGATCAGGGTTTTTGCGATAAACATAACTGTTACATAAAAAGGCGAAAAATAAACTAGGATACGCTCTGACCTACTTTATTCAAATTGGATTCAAAATTGTCAGAATCATCAATGATAGGTGTTAAATGAATACCTGCAGATGTTGTCATTTTATCATTAGACACAGTTGTTTGATTAATACTACTACTAGTATTCTGATCCAACTTGTCACAAACATCTTTTGGCTCAACAGGAGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD196374             [                                                                                                                                                                                                                                                                                                    TCAATGATAGGTGTTAAATGAATACCTGCAGATGTTGTCATTTTATCATTAGACACAGTTGTTTGATTAATACTACTACTAGTATTCTGATCCAACTTGTCACAAACATCTTTTGGCTCAACAGGAGATTTTTCAACAACAGAAATGTGCGTGAACAAATGTCGACCATTAATGGTCAATCGTGGCACACCGAAATAACCGTAGGCCGCTAATAACTGTGAATTGATATAATCTCGACTGACTTGAGTTAAATTCCTACAGAGATTATGTTTAGGGTTAAAAGGATCGGTAACTGTAAAACAACGCTTTTCAGGAGCATTGAAACATGGCACTGGTTCAGGTTCCACAATATTAATCGTACAAGAAGAAATTTTAAAATCAAATAAATAAAATCTGAGGAAACCAAGCCATAAATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD065400             [                                                                                                                                                                                                                                                                                                                          TACCTGCAGATGTTGTCATTTTATCATTAGACACAGTTGTTTGATTAATACTACTACTAGTATTCTGATCCAACTTGTCACAAACATCTTTTGGCTCAACAGGAGATTTTTCAACAACAGAAATGTGCGTGAACAAATGTCGACCATTAATGGTCAATCGTGGCACACCGAAATAACCGTAGGCCGCTAATAACTGTGAATTGATATAATCTCGACTGACTTGAGTTAAATTCCTACAGAGATTATGTTTAGGGTTAAAAGGATCGGTAACTGTAAAACAACGCTTTTCAGGAGCATTGAAACATGGCACTGGTTCAGGTTCCACAATATTAATCGTACAAGAAGAAATTTTAAAATCAAATAAATAAAATCTGAGGAAACCAAGCCATAAATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD124645             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGGATCGGTAACTGTAAAACAACGCTTNTCAGGAGCATTGAAACATGGCACTGGTTCAGGTTCCACAATATTAATCGTACAAGAAGAAATTTTAAAATCAAATAAATAAAATCTGAGGAAACCAAGCCATAAATCAGCTAAACATGGTAAATTGTTAGACGAAGAGGAATATGGTTGATCAGGACATAATTTTCGAATTAATTCAATGTCTGTAATAAACGAACAATCAGTATTGGGTGGCAAAACCTGATGATAAGAATCTTCAGGAATTTTATCAAGATGTTGGCGGTAAAGCATATGAAGATTTGGAAGTAATGGAGGTTCATAATGTTGTAAGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCCGGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCTTGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGACACCACTTGTACGCAA                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD117507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGATAAGAATTTTCAGGAA TTTATCAAGATGTTGGCGGTAAAGCATATGAAGATTTGGAAGTAATGGAGGTTCATAATGTTGTAAGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCCGGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCTTGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGACAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCCATCCCCATTG                                                                                                          ]
[+] EMBL CD117574             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGATAAGAATTTTCAGGAA TTTATCAAGATGTTGGCGGTAAAGCATATGAAGATTTGGAAGTAATGGAGGTTCATAATGTTGTAAGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCCGGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCTTGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGACAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCACTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAAACTGTTCATTATCATCATCATCGTCAT                               ]
[-] EMBL CD127347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATAATGTTGTAAGTAGAGTATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCCGGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCTTGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATT   ATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGCC]
[+] EMBL CD197690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCCGGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCTTGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGGTAATTCATTCCTTTTTGTATTGTGACCCGTA GAACAATTAAACGAGGCAGCTTT                                                                                                                                                                                                               ]
[+] EMBL CD127269             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gcaatAGGTAGGTATTAATTAATTTGTTCCAATCATATC CATATGGATTACCACTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGC ]
[+] EMBL CD127680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCG                                                                                                                                                                                                                                                                        ]
[-] EMBL CD167097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGATCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGCC]
[-] EMBL CD127228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGCC]
[-] EMBL CD127668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGGCCAAATCATATC CATATGGATTACCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACC TTTGTACGCTCAACAGTATGTAAATTTAGGGAACATAG                                                                                                                                                                                                                                                                                ]
[+] EMBL CD127716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGCCAAATCATATCTCATGGTGATTACCAGTACTAATACGATACCGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTATTATCATTTAAACGGGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGC ]
[+] EMBL CD127565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAGACAAAGATAAAAGTAGTCACCACTTGTACGCAAAACAGTATG AAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTA GAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGC ]




>consensus_10503#0
AAGAGTATTTTCTCTATTGACTGGATTATAAGCCAATACATTTATTTATACTATTACAAG
TAAACAGACAGACAATTAAACAAACAATTAGGATCAGTAATAATCATAAAAGCCTATTTC
CATTAAATTTAATTAACAAAAGTAAGTTGCTGAAACATTTATTAAGAAACAATAAACGTT
AAACGATCAGGGTTTTTGCGATAAACATAACTGTTACATAAAAAGGCGAAAAATAAACTA
GGATACGCTCTGACCTACTTTATTCAAATTGGATTCAAAATTGTCAGAATCATCAATGAT
AGGTGTTAAATGAATACCTGCAGATGTTGTCATTTTATCATTAGACACAGTTGTTTGATT
AATACTACTACTAGTATTCTGATCCAACTTGTCACAAACATCTTTTGGCTCAACAGGAGA
TTTTTCAACAACAGAAATGTGCGTGAACAAATGTCGACCATTAATGGTCAATCGTGGCAC
ACCGAAATAACCGTAGGCCGCTAATAACTGTGAATTGATATAATCTCGACTGACTTGAGT
TAAATTCCTACAGAGATTATGTTTAGGGTTAAAAGGATCGGTAACTGTAAAACAACGCTT
TTCAGGAGCATTGAAACATGGCACTGGTTCAGGTTCCACAATATTAATCGTACAAGAAGA
AATTTTAAAATCAAATAAATAAAATCTGAGGAAACCAAGCCATAAATCAGCTAAACATGG
TAAATTGTTAGACGAAGAGGAATATGGTTGATCAGGACATAATTTTCGAATTAATTCAAT
GTCTGTAATAAACGAACAATCAGTATTGGGTGGCAAAACCTGATGATAAGAATTTTCAGG
AATTTATCAAGATGTTGGCGGTAAAGCATATGAAGATTTGGAAGTAATGGAGGTTCATAA
TGTTGTAAGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCC
GGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCT
TGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATCCATATGGATTA
CCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCA
CCACTTGTACGCAAAACAGTATGAAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTC
ATTTTTGTATTGTGACCAGTAGAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGT
ATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTA
GAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACA
GGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCA
TTATCATCGCC

consensusID : consensus_10503#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 576
fasta sequence

                              [GATAATGACAATCAACATACGTATGAAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTAGAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTGTTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGCCCTCTTCGTCACCGTCATTATCTTCACAATCATCATCCGTTGTTGGGTCCATTGCCAGTAATTTATTCTCGTTAAAATCATTTGGACAAATTGCATCCAATGAACAGTGACTATCTGGTAAGGCTAAACCGAACCATGAACTACCAGTTCCTCGAACTTTTATATTTGGAATTCGAGCTTCAGTAGCAGCAATCAGATCATTTGCAAAATTCTGTCGTCGCTGCATCTCACAGGTATCAGCCACAACAGAAAGAGAAGCGGATT]

[+] EMBL CD116730             [GATAATGACAATCAACATACGTATGAAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTCATTTTTGTATTGTGACCAGTAGAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGTGTTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCATTATCATCGCCCTCTTCGTCACCGTCATTATCTTCACAATCATCATCCGTTGTTGGGTCCATTGCCAGTAATTTATTCTCGTTAAAATCATTTGGACAAATTGCATCCAATGAACAGTGACTATCTGGTAAGGCTAAACCGAACCATGAACTACCAGTTCCTCGAACTTTTATATTTGGAATTCGAGCTTCAGTAGCAGCAATCAGATCATTTGCAAAATTCTGTCGTCGCTGCATCTCACAGGTATCAGCCACAACAGAAAGAGAAGCGGATT]
[+] EMBL CD069285             [                                                                                                           gCGG AATCGCCCTTGTAGGTGGTGTG TAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTAGAAAGAATATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCA                                                                                                                                                                                                                                                                                  ]




>consensus_10503#1
GATAATGACAATCAACATACGTATGAAATTTAGGGAATTTAGGTTTGTCGGATAATTCAT
TCATTTTTGTATTGTGACCAGTAGAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTC
GTGTTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATAT
TAGAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATA
CAGGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCAT
CATTATCATCGCCCTCTTCGTCACCGTCATTATCTTCACAATCATCATCCGTTGTTGGGT
CCATTGCCAGTAATTTATTCTCGTTAAAATCATTTGGACAAATTGCATCCAATGAACAGT
GACTATCTGGTAAGGCTAAACCGAACCATGAACTACCAGTTCCTCGAACTTTTATATTTG
GAATTCGAGCTTCAGTAGCAGCAATCAGATCATTTGCAAAATTCTGTCGTCGCTGCATCT
CACAGGTATCAGCCACAACAGAAAGAGAAGCGGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10503#0      AAGAGTATTTTCTCTATTGACTGGATTATAAGCCAATACATTTATTTATACTATTACAAG 60
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TAAACAGACAGACAATTAAACAAACAATTAGGATCAGTAATAATCATAAAAGCCTATTTC 120
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      CATTAAATTTAATTAACAAAAGTAAGTTGCTGAAACATTTATTAAGAAACAATAAACGTT 180
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      AAACGATCAGGGTTTTTGCGATAAACATAACTGTTACATAAAAAGGCGAAAAATAAACTA 240
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      GGATACGCTCTGACCTACTTTATTCAAATTGGATTCAAAATTGTCAGAATCATCAATGAT 300
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      AGGTGTTAAATGAATACCTGCAGATGTTGTCATTTTATCATTAGACACAGTTGTTTGATT 360
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      AATACTACTACTAGTATTCTGATCCAACTTGTCACAAACATCTTTTGGCTCAACAGGAGA 420
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TTTTTCAACAACAGAAATGTGCGTGAACAAATGTCGACCATTAATGGTCAATCGTGGCAC 480
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      ACCGAAATAACCGTAGGCCGCTAATAACTGTGAATTGATATAATCTCGACTGACTTGAGT 540
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TAAATTCCTACAGAGATTATGTTTAGGGTTAAAAGGATCGGTAACTGTAAAACAACGCTT 600
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TTCAGGAGCATTGAAACATGGCACTGGTTCAGGTTCCACAATATTAATCGTACAAGAAGA 660
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      AATTTTAAAATCAAATAAATAAAATCTGAGGAAACCAAGCCATAAATCAGCTAAACATGG 720
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TAAATTGTTAGACGAAGAGGAATATGGTTGATCAGGACATAATTTTCGAATTAATTCAAT 780
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      GTCTGTAATAAACGAACAATCAGTATTGGGTGGCAAAACCTGATGATAAGAATTTTCAGG 840
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      AATTTATCAAGATGTTGGCGGTAAAGCATATGAAGATTTGGAAGTAATGGAGGTTCATAA 900
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TGTTGTAAGTAGAATATAACTAACAGAGGTATGACTGTTTCTTCAAATGTACCATTTTCC 960
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      GGCATATCTAAATGACCCAACCGTGATAATTTACGAAATAATATTGCTAACTGTAGAGCT 1020
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      TGATCATTTAAATTGAGGTAGGTATTAATTAATTTGGCCAAATCATATCCATATGGATTA 1080
consensus_10503#1      ------------------------------------------------------------
                                                                                   

consensus_10503#0      CCAGTACTAATACGATAACGTACACCATAGAAATCCGTCAGACAAAGATAAAAGTAGTCA 1140
consensus_10503#1      ----------------------------------------------------GATAATGA 8
                                                                             ** * *

consensus_10503#0      CCACTTGTACGCAAAACAGTATGAAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTC 1200
consensus_10503#1      CAATCAACATAC------GTATGAAATTTAGGGAATTTAGGTTTGTCGGATAATTCATTC 62
                       * *     *  *      ******************************************

consensus_10503#0      ATTTTTGTATTGTGACCAGTAGAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGT 1260
consensus_10503#1      ATTTTTGTATTGTGACCAGTAGAACAATTAAACGAGGCAGCTTTTTCGGAAATTGTTCGT 122
                       ************************************************************

consensus_10503#0      ATTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTA 1320
consensus_10503#1      GTTTGTGGTGTGTTAGTCGGTGATTCACATGCATTAAGTTGTAATAAATCGAAAATATTA 182
                        ***********************************************************

consensus_10503#0      GAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACA 1380
consensus_10503#1      GAAAGAACATAACCAATCCCCATTGACTGTTCAGTGTCATTTGTTGACTGACCACATACA 242
                       ************************************************************

consensus_10503#0      GGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCA 1440
consensus_10503#1      GGCTGTGGACTAGACTGTTCATTATCATCATCATCGTCATCATCATCATGATGATCATCA 302
                       ************************************************************

consensus_10503#0      TTATCATCGCC------------------------------------------------- 1451
consensus_10503#1      TTATCATCGCCCTCTTCGTCACCGTCATTATCTTCACAATCATCATCCGTTGTTGGGTCC 362
                       ***********                                                 

consensus_10503#0      ------------------------------------------------------------
consensus_10503#1      ATTGCCAGTAATTTATTCTCGTTAAAATCATTTGGACAAATTGCATCCAATGAACAGTGA 422
                                                                                   

consensus_10503#0      ------------------------------------------------------------
consensus_10503#1      CTATCTGGTAAGGCTAAACCGAACCATGAACTACCAGTTCCTCGAACTTTTATATTTGGA 482
                                                                                   

consensus_10503#0      ------------------------------------------------------------
consensus_10503#1      ATTCGAGCTTCAGTAGCAGCAATCAGATCATTTGCAAAATTCTGTCGTCGCTGCATCTCA 542
                                                                                   

consensus_10503#0      ----------------------------------
consensus_10503#1      CAGGTATCAGCCACAACAGAAAGAGAAGCGGATT 576