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Schistosoma mansoni
cluster # 10511 cluster # 10511       Sequences # 17       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10511#0 length = 858 sequences # 3  
consensus_10511#1 length = 570 sequences # 3  
consensus_10511#2 length = 502 sequences # 8  
consensus_10511#3 length = 249 sequences # 2  
consensus_10511#4 length = 159 sequences # 1  

consensusID : consensus_10511#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 858
fasta sequence
                              [CATGCGGACATTGCCGTATTGGCCTAGATGGAGTGATTGATGGACAGTCCTGTACTACTGAATGTTCTGTAGCATCCGAAACATCACCTGATTATTGTCAGGATTCAGGGAACTTTTGTGTATGCGGTGCACCTGGTTGTAGTACGAGAAAAGTTACTAACCGCCATAATATGGAATCGGACATCACTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTCTAAAGGAGCTTCAGCTTTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGTGGTATTGAAAAATCAAGTCCTTTCTGCCAGTTTTCGTGTTCCGTATTGGCTTTCTATGGCATGTGAACCAGTAATACGTAATATGTTGTCGAAAGAACCGAGCGATCGCCCGACAACAAAACGTATCAGTCAATTTCCATGGTTCACTTCATCAACAATTCAACATAGTCGTTATCATGATAAACTAATTGCAAATGTTAAGGTTTAATTCGTGGCCCACAAGGCATTTAACTAA]

[+] EMBL CD196520             [CATGCGGACATTGCCGTATTGGCCTAGATGGAGTGATTGATGGACAGTCCTGTACTACTGAATGTTCTGTAGCATCCGAAACATCACCTGATTATTGTCAGGATTCAGGGAACTTTTGTGTATGCGGTGCACCTGGTTGTAGTACGAGAAAAGTTACTAACCGCCATAATATGGAATCGGACATCACTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD147480             [                                                                                                                                                                                                                                                       TACATCACAACCGAAGTTGGGTACGTCTGTTATTGAAAGAACCATTGCGAAA GGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTAGCAATAAAGATCATTGACAAATCCCGTCTATGTCCTGAAAATCTCACAAAAATATACAGAGAATCTGATATTCTAAAGGAGCTTCAGCTTTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGTGGTATTGAAAAATCAAGTCCTTTCTGCCAGTTTTCGTGTTCCGTATTGGCTTTCTATGGCATGTGAACCAGTAATACGTAATAT                                                                                                                                                       ]
[-] EMBL CD147401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGTGGTATTGAAAAATCAAGTCCTTTCTGCCAGTTTTCGTGTTCCGTATTGGCTTTCTATGGCATGTGAACAAGTAATACGTAGTATGTTGTCGAAAGAACCGAGCGATCGCCCGACAACAAAACGTATCAGTCAATTTCCATGGTTCACTTCATCAACAATTCAACATAGTCGTTATCATGATAAACTAATTGCAAATGTTAAGGTTTAATTCGTGGCCCACAAGGCATTTAACTAA]


>consensus_10511#0 CATGCGGACATTGCCGTATTGGCCTAGATGGAGTGATTGATGGACAGTCCTGTACTACTG AATGTTCTGTAGCATCCGAAACATCACCTGATTATTGTCAGGATTCAGGGAACTTTTGTG TATGCGGTGCACCTGGTTGTAGTACGAGAAAAGTTACTAACCGCCATAATATGGAATCGG ACATCACTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAAC ATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAG GGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAA AGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTG ATATTCTAAAGGAGCTTCAGCTTTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTC AGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAG CCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGG CTGTCGATTACACTCACTCTTGTGGTATTGAAAAATCAAGTCCTTTCTGCCAGTTTTCGT GTTCCGTATTGGCTTTCTATGGCATGTGAACCAGTAATACGTAATATGTTGTCGAAAGAA CCGAGCGATCGCCCGACAACAAAACGTATCAGTCAATTTCCATGGTTCACTTCATCAACA ATTCAACATAGTCGTTATCATGATAAACTAATTGCAAATGTTAAGGTTTAATTCGTGGCC CACAAGGCATTTAACTAA



consensusID : consensus_10511#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 570
fasta sequence
                              [GATTCGGAAAAAGCTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTAATTTATGTTAGTTCCCTCACTTTTGACTTCGTAGGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]

[+] EMBL CD180193             [GATTCGGAAAAAGCTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAATTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTAATTTATGTTAGTTCCCTCACTTTTGACTTCGTAGGTTGCAATACAGACCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAAATATACACAGAATCTGATATTCTAAAGGAGCTTCATCATTCACATATTGCGAAAC                                                                                                                                                                                                                                                      ]
[+] EMBL CD180250             [                              ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTAATTTATGTTAGTTCCCTCACTTTTGACTTCGTAGGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]
[+] EMBL CD180244             [                              ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTAATTTATGTTAGTTCCCTCACTTTTGACTTCGTAGGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTC AAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]


>consensus_10511#1 GATTCGGAAAAAGCTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCT GACCAACATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATT GGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTA ATTTATGTTAGTTCCCTCACTTTTGACTTCGTAGGTTGCAATAAAGATCATTGACAAATC CCGTCTAAGTCCTGAAAATCTCAAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGC TTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTA TGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGAT TTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTC ACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAA TGAATATCAAATTAGCGGATTTTAGCTTCG



consensusID : consensus_10511#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 502
fasta sequence
                              [ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATC-AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACT-TTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]

[+] EMBL CD180256             [ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATC AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACT TTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]
[+] EMBL CD180238             [ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATC AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACT TTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]
[+] EMBL CD123684             [ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATC AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAGTTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACT TTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCANATTAGCGGATTTTAGCTTCG]
[+] EMBL CD180264             [ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATC AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTC AAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACT TTCGGCTGTCGATTACACTCACTCTTGTGGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATCAAATTAGCGGATTTTAGCTTCG]
[+] EMBL CD180182             [ATAGATGGTGCCTGAGCTACCAGTTTCCCTGACCAACATC AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATG                                                                                                                                                                                                    ]
[-] EMBL CD196413             [ TAGATGGTGCCTCAACTACCAGTTTGCCTGACCAACATC AGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAGATTCCTGGATGTACT TTCGGCTGTCGA                                                                                                  ]
[-] EMBL CD196377             [               ACTACCAGTTTCCCTGACCAACATCAAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACT TTCGGCTGTCGA                                                                                                  ]
[-] EMBL CD196473             [                                              ACATCAAAACCGAAGTNGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTAAGTCCTGAAAATCTCAAAAANATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAGGTCGATGCTCGGATCAAATTCCTGGATGTACTCTTCGGCTGTCGAT                                                                                                 ]


>consensus_10511#2 ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAACATCAGGATACATCAAAACCGAAG TTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAGGGATATTCTCGTCAGTCAAACTC GCCAAGCACACCATTACTGGAATTTTCGTTGCAATAAAGATCATTGACAAATCCCGTCTA AGTCCTGAAAATCTCAAAAAAATATACAGAGAATCTGATATTTTAAAGGAGCTTCATCAT TCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAATG GAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTGAG GTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTTGT GGTATTGTACATCGAGATCTAAAGGCTGAAAACATATTGCTAGATTCAGAAATGAATATC AAATTAGCGGATTTTAGCTTCG



consensusID : consensus_10511#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 249
fasta sequence
                              [ACCGACTGACTGACTAGGATTCAAGTATGCACACAAATAAGGGATAAACCTCGTTGATAGATATGTTAGAGAATAAAATCATAAAATTATTGCCGTCAATACCATTACCAAGCCTGTTAACTTACCCATAGAAAGCCAATACGGAACACGAAAACTGGCAGAAAGGACTTGATTTTTCAAATGGGGAAGAGATTGAGCATCGAATGGAAGAGCACCACACACCATGACGTAAAGAATAACACGGTACCG]

[+] EMBL CD192258             [ACCGACTGACTGACTAGGATTCAAGTATGCACACAAATAAGGGATAAACCTCGTTGATAGATATGTTAGAGAATAAAATCATAAAATTATTGCCGTCAATACCATTACCAAGCCTGTTAACTTACCCATAGAAAGCCAATACGGAACACGAAAACTGGCAGAAAGGACTTGATTTTTCAAATGGGGAAGAGATTGAGCATCGAATGGAAGAGCACCACACACCATGACGTAAAGAATAACAC       ]
[+] EMBL CD062203             [                                                                                                                                                         ACTGGCAGAAAGGACTTGATTTTTCAAATGGGGAAGAGATTGAGCATCGAATGGAAGAGCACCACACACCATGACGTAAAGAATAACAGGGTACCG]


>consensus_10511#3 ACCGACTGACTGACTAGGATTCAAGTATGCACACAAATAAGGGATAAACCTCGTTGATAG ATATGTTAGAGAATAAAATCATAAAATTATTGCCGTCAATACCATTACCAAGCCTGTTAA CTTACCCATAGAAAGCCAATACGGAACACGAAAACTGGCAGAAAGGACTTGATTTTTCAA ATGGGGAAGAGATTGAGCATCGAATGGAAGAGCACCACACACCATGACGTAAAGAATAAC ACGGTACCG



consensusID : consensus_10511#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 159
fasta sequence
                              [ACCGACTGACTGACTAGGATTCAAGTATGCACACAAATAAGGGATAAACCTCGTTGATAGATATGTTAGAGAATAAAATCATAAAATTATTGCCGTCAATACCATTACCAAGCCTGTTAACTTACCCATAGAAAGCCAATACGGNNNNNNNANNNCTGG]

[+] EMBL CD192268             [ACCGACTGACTGACTAGGATTCAAGTATGCACACAAATAAGGGATAAACCTCGTTGATAGATATGTTAGAGAATAAAATCATAAAATTATTGCCGTCAATACCATTACCAAGCCTGTTAACTTACCCATAGAAAGCCAATACGGNNNNNNNANNNCTGG]


>consensus_10511#4 ACCGACTGACTGACTAGGATTCAAGTATGCACACAAATAAGGGATAAACCTCGTTGATAG ATATGTTAGAGAATAAAATCATAAAATTATTGCCGTCAATACCATTACCAAGCCTGTTAA CTTACCCATAGAAAGCCAATACGGNNNNNNNANNNCTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10511#1      ------------------------------------------------------------
consensus_10511#2      ------------------------------------------------------------
consensus_10511#0      CATGCGGACATTGCCGTATTGGCCTAGATGGAGTGATTGATGGACAGTCCTGTACTACTG 60
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      ------------------------------------------------------------
consensus_10511#2      ------------------------------------------------------------
consensus_10511#0      AATGTTCTGTAGCATCCGAAACATCACCTGATTATTGTCAGGATTCAGGGAACTTTTGTG 120
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      -----------------------------------------------------GATTCGG 7
consensus_10511#2      ------------------------------------------------------------
consensus_10511#0      TATGCGGTGCACCTGGTTGTAGTACGAGAAAAGTTACTAACCGCCATAATATGGAATCGG 180
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      AAAAAGCTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAAC 67
consensus_10511#2      -----------------------ATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAAC 37
consensus_10511#0      ACATCACTGAGTTGGCTTCAACAATAGATGGTGCCTCAACTACCAGTTTCCCTGACCAAC 240
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      ATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAG 127
consensus_10511#2      ATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAG 97
consensus_10511#0      ATCAGGATACATCAAAACCGAAGTTGGGTACGTATGTTATTGAAAGAACCATTGGGAAAG 300
consensus_10511#3      ----------------ACCGA--CTGACTGACTAGGATTCAAGTATGCACACAAATAAGG 42
consensus_10511#4      ----------------ACCGA--CTGACTGACTAGGATTCAAGTATGCACACAAATAAGG 42
                                       *****   **  *   ** * *      *    **     ** *

consensus_10511#1      GGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGTAATTTATG 187
consensus_10511#2      GGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGT-------- 149
consensus_10511#0      GGATATTCTCGTCAGTCAAACTCGCCAAGCACACCATTACTGGAATTTTCGT-------- 352
consensus_10511#3      GATAAACCTCGTTGATAGATATGTTAGAGAATAAAATCA-TAAAATTAT----------- 90
consensus_10511#4      GATAAACCTCGTTGATAGATATGTTAGAGAATAAAATCA-TAAAATTAT----------- 90
                       *   *  *****   *  *  *     ** * *  ** * *  **** *           

consensus_10511#1      TTAGTTCCCTCACTTTTGACTTCGTAGGTTGCAATAAAGATCATTGACAAATCCCGTCTA 247
consensus_10511#2      -----------------------------TGCAATAAAGATCATTGACAAATCCCGTCTA 180
consensus_10511#0      -----------------------------TGCAATAAAGATCATTGACAAATCCCGTCTA 383
consensus_10511#3      -----------------------------TGCCGTCAATACCATT-ACCAAGCCTGT-TA 119
consensus_10511#4      -----------------------------TGCCGTCAATACCATT-ACCAAGCCTGT-TA 119
                                                    ***  * ** * **** ** ** ** ** **

consensus_10511#1      AGTCCTGAAAATCTCAAAAAAAATATACAGAGAATCTGATATTTTA-AAGGAGCTTCATC 306
consensus_10511#2      AGTCCTGAAAATCTCAAAAAAA-TATACAGAGAATCTGATATTTTA-AAGGAGCTTCATC 238
consensus_10511#0      AGTCCTGAAAATCTCAAAAAAA-TATACAGAGAATCTGATATTCTA-AAGGAGCTTCAGC 441
consensus_10511#3      ACTT-----ACCCATAGAAAGCCAATACGGAACACGAAAACTGGCAGAAAGGACTTGATT 174
consensus_10511#4      ACTT-----ACCCATAGAAAGCCAATACGGNNNNNNNANNNCTGG--------------- 159
                       * *      *  *  * ***    **** *                              

consensus_10511#1      ATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAA 366
consensus_10511#2      ATTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAA 298
consensus_10511#0      TTTCAAATATTGTGAAACTTTATCAGGTTATGGAAACTCAGCGACTACTCTGTATGGTAA 501
consensus_10511#3      TTTCAAATGGGGAAGAGATTGAGCATCGAATGGAAGAGCACCACACACCATGACGTAAAG 234
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      TGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTG 426
consensus_10511#2      TGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTG 358
consensus_10511#0      TGGAGTATGTTTCAAATGGCGAGCTATTTGACTACATAGCCACGAATGGAAGATTTTCTG 561
consensus_10511#3      AATAACACGGTACCG--------------------------------------------- 249
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      AGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTT 486
consensus_10511#2      AGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTT 418
consensus_10511#0      AGGTCGATGCTCGGATCAAATTCCTGGATGTACTTTCGGCTGTCGATTACACTCACTCTT 621
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      GTGGTATTGTACA-TCGAGATCTAAAGGCTGAAAA--------CATATTGCTAGATTCAG 537
consensus_10511#2      GTGGTATTGTACA-TCGAGATCTAAAGGCTGAAAA--------CATATTGCTAGATTCAG 469
consensus_10511#0      GTGGTATTGAAAAATCAAGTCCTTTCTGCCAGTTTTCGTGTTCCGTATTGGCTTTCTATG 681
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      AAATGAATATCAAATTAGCGGATTTTAGCTTCG--------------------------- 570
consensus_10511#2      AAATGAATATCAAATTAGCGGATTTTAGCTTCG--------------------------- 502
consensus_10511#0      GCATGTGAACCAGTAATACGTAATATGTTGTCGAAAGAACCGAGCGATCGCCCGACAACA 741
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      ------------------------------------------------------------
consensus_10511#2      ------------------------------------------------------------
consensus_10511#0      AAACGTATCAGTCAATTTCCATGGTTCACTTCATCAACAATTCAACATAGTCGTTATCAT 801
consensus_10511#3      ------------------------------------------------------------
consensus_10511#4      ------------------------------------------------------------
                                                                                   

consensus_10511#1      ---------------------------------------------------------
consensus_10511#2      ---------------------------------------------------------
consensus_10511#0      GATAAACTAATTGCAAATGTTAAGGTTTAATTCGTGGCCCACAAGGCATTTAACTAA 858
consensus_10511#3      ---------------------------------------------------------
consensus_10511#4      ---------------------------------------------------------
                                                                                




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)