cluster # 10512

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Schistosoma mansoni
cluster # 10512 cluster # 10512 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10512#0 length = 1575 sequences # 15

consensus_10512#1 length = 683 sequences # 2

consensusID : consensus_10512#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1575
fasta sequence

                              [CAANAATTTGGCACGAGGGACAATCCTTGTTCTGAGGGGAAGTTTGTAGAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAAACGGCTTGATTCCAGTTCCAGTTCACAACCACCTCAGGTACACACCACGCACAGAGTTAATAAAATTAACAGACTTTCTTCAAGTGAAGTAGCCAGATTGAATCTCAAACCTGGACGAAATGATATTGAGTTTCGTATCACCACAAAGTATCAAGGGACTTGCACGTGTTCAGCTTCTATTTATTATTGGCATTGGTATGACAAAATAGTTGTTTCTGACGTTGATGGGACCATTACACGTAGTGATTTACTTGGACACTTGCTTCCTATGGTGGGTCGTGATTGGACACACTCTG-GAGTTGCT-CGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCCCGAGCTCTCGGACAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT-TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA-CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA-AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT-TGTAAGTACCGGACTACACA-TATACC-ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGAAATCTAATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTG----ATATATATATATATATATATATATATATATATATATATATAAGGTTCTTAAATACATTTTCAAATTGCCTTTCTTGTTGCTCGCTTCCGTTCTAGTAACGTAACTAATTTAGTATTCATCTTGCAAACAAACACCCATATTTTTCAACAGATTTGTCTTTCTGGTTTATTAAAAATGTTATCTTTCACAGAGATTATGATTTTCTATTTTACTTACCAATTGTACCTAACTTTTCGTAAAAATGAACTTTCTGAGACCAATAAATTTA]

[+] EMBL CD079764             [CAANAATTTGGCACGAGGGACAATCCTTGTTCTGAGGGGAAGTTTGTAGAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAAACGGCTTGATTCCAGTTCCAGTTCACAACCACCTCAGGTACACACCACGCACAGAGTTAATAAAATTAACAGACTTTCTTCAAGTGAAGTAGCCAGATTGAATCTCAAACCTGGACGAAATGATATTGAGTTTCGTATCACCACAAAGTATCAAGGGACTTGCACGTGTTCAGCTTCTATTTATTATTGGCATTGGTATGACAAAATAGTTGTTTCTGACGTTGATGGGACCATTACACGTAGTGATTTACTTGGACACTTGCTTCCTATGGTGGGTCGTGATTGGACACACTCTG GAGTTGCT CGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD166081             [                          tgtTTCTGA GGGAAGTTTGTAGAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAAACGGCTTGATTCCAGTTCCAGTTCACAACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD189913             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTGAGTTTCGTATCACCACAAAGTATCAAGGGACTTGCACGTGTTCAGCTTCTATTTATTATTGGCATTGGTATGACAAAATAGTTGTTTCTGACGTTGATGGGACCATTACACGTAGTGATTTACTTGGACACTTGCTTCCTATGGTGGGTCGTGATTGGACACACTCTG GAGTTGCT CGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCCCGAGCTCTCGGACAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD071505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCATTACACGTAGTGATTTACTNGGACACTTGCTTCCTATGGTGGGTCGTGATTGGACACACTCTG GAG TGCTNCGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCCCGAGCTCTCGGACAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD111121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           acaACCCCCTGCGCGTTGCT CGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCCCGAGCTCTCGGACAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD121058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TG GAGTTGCT CGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCCCGAGCTCTCGGACAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD114443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTAATTGAGACAAGTCGTTCAGGATTCAGCGTCCAGGATGCCAGATGGACCAATACTATTGTATCCGAATTCTCTTCTCCATGCCT TCCTCCAGAAAGTCATTATTAATAAGCCAGAAGTGTCTAAAACGAAATGCCTTCAAGATGTATGTTGTCATATTCCGAAGGGTTCCTCTCCACTGTATGCGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD134205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTACACA TATACC ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGACATCTAATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTG    ATATATATATATATATATATATATATATATATATATA   AGGGNGCTTAAATACATTTTCAGATTGCCTTTCTTGTTGC                                                                                                                                                                                            ]
[+] EMBL CD078972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGACAAGTCGTTCAGGATTCAGCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTACACA TATACC ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGAAATCTAATTACGAATTATCTTTTCCTCTTCC NAGACACTGGAGAATTCTTGATATATATATATATATATATATATATATATATATATATATATATAAGGTTC                                                                                                                                                                                                                             ]
[+] EMBL CD061488             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGNGCGATTTAGTGGACCTTCACTTTCCACCTCTTNTGT AGTACCGGACTACACA TATACC ACATCCTGTTGACTATGATCCTAGNTGTGNTCTAAAGTCAGAAAATTCGA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD061324             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCAGGCCTGTCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCATCGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACATAGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTACACAGTATACCGACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACG                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD061333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCAGGTTGCCAGATGGACCTATACTATTGTCTCCGAATTCTCTTCGCCATGCCT TCCACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTGCACA TATACC ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGTAAATTCGACGCCAG                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD074024             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCGGTAACAAGGTTAATGATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTACACA TATACC ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGAAATCTAATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTG    ATATATATATATATATATATATATATATATATATATATATAAGGTTCTTAAATACATTTTCAAATTGCCTTTCTTGTTGCTCGCTTCCGTTCTAGTAACGTAACTAATTTAGTATTCATCTTGCAAACAAACACCCATATTTTTCAACAGATTTGTCTTTCTGGTTTATTAAAAATGTTATCTTTCACAGAGATTATGATTTTCTATTTTACTTACCAATTGTACCTAACTTTTCGTAAAAATGAACTTTCTGAGACCAATAAATTTA]
[-] EMBL CD077056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTACACA TATACC ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGAAATCTAATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTGAT  ATATATATATATATATATATATATATATATATATATATATAAGGTTCTTAAATACATTTTCAAATTGCCTTTCTTGTTGCTCGCTTCCGTTCTAGTAACGTAACTAATTTAGTATTCATCTTGCAAACAAACACCCATATTTTTCAACAGATTTGTCTTTCTGGTTTATTAAAAATGTTATCTTTCACAGAGATTATGATTTTCTATTTTACTTACCAATTGTACCTAACTTTTCGTAAAAATGAACTTTCTGAGACCAATAAATTTA]
[-] EMBL CD073424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATGAGTATCAGTCCCTAAGAAGTACA AGTTATCATGAGTTGGGCGATTTAGTGGACCTTCACTTTCCACCTCTT TGTAAGTACCGGACTACACA TATACC ACATCCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGAAATCTAATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTGATATATATATATATATATATATATATATATATATATATATATATAAGGTTCTTAAATACATTTTCAAATTGCCTTTCTTGTTGCTCGCTTCCGTTCTAGTAACGTAACTAATTTAGTATTCATCTTGCAAACAAACACCCATATTTTTCAACAGATTTGTCTTTCTGGTTTATTAAAAATGTTATCTTTCACAGAGATTATGATTTTCTATTTTACTTACCAATTGTACCTAACTTTTCGTAAAAATGAACTTTCTGAGACCAATAAATTTA]




>consensus_10512#0
CAANAATTTGGCACGAGGGACAATCCTTGTTCTGAGGGGAAGTTTGTAGAGCACATAGTT
TCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTT
TACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTC
GCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCC
AAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAACACGAACTGCT
GCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAAACGGCTTGAT
TCCAGTTCCAGTTCACAACCACCTCAGGTACACACCACGCACAGAGTTAATAAAATTAAC
AGACTTTCTTCAAGTGAAGTAGCCAGATTGAATCTCAAACCTGGACGAAATGATATTGAG
TTTCGTATCACCACAAAGTATCAAGGGACTTGCACGTGTTCAGCTTCTATTTATTATTGG
CATTGGTATGACAAAATAGTTGTTTCTGACGTTGATGGGACCATTACACGTAGTGATTTA
CTTGGACACTTGCTTCCTATGGTGGGTCGTGATTGGACACACTCTGGAGTTGCTCGACTG
TACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCCCGAGCTCTCGGA
CAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCAGCGTCCAGGTTG
CCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCTTCCACCAGGAAGTC
ATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTATGTTGTCTTTTT
CCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAATGATGTTTTCGCG
TATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCACGAGGAGAAGTT
CGTAATGAGTATCAGTCCCTAAGAAGTACAAGTTATCATGAGTTGGGCGATTTAGTGGAC
CTTCACTTTCCACCTCTTTGTAAGTACCGGACTACACATATACCACATCCTGTTGACTAT
GATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCACATTCACCTGAC
ACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCATTTTGGAAATCT
AATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTGATATATATATATA
TATATATATATATATATATATATATATAAGGTTCTTAAATACATTTTCAAATTGCCTTTC
TTGTTGCTCGCTTCCGTTCTAGTAACGTAACTAATTTAGTATTCATCTTGCAAACAAACA
CCCATATTTTTCAACAGATTTGTCTTTCTGGTTTATTAAAAATGTTATCTTTCACAGAGA
TTATGATTTTCTATTTTACTTACCAATTGTACCTAACTTTTCGTAAAAATGAACTTTCTG
AGACCAATAAATTTA

consensusID : consensus_10512#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 683
fasta sequence

                              [GCGGGNAATTCGATTTTAATCACCATGGCACGTTACGAAAAGTGATGTAGTACGGGAGCCTCATCTAAAAAGCTTTACACATGAAAAGGAAGTGTACCTGGAAGAACTAGTTACAGCGGAAGTCGATCAAAATATTAAAGAGGTGTATATCTATCCCCCATCTCACGGAATTTTTCCACCTCAATGTCAAGGATCATACAACACTAGTGACAGCAACTGTGTTGACTACGGTTATCGTTCCGACAACGAACACTCTCCAAGAAGCATGTCACCCGTCTATGCCCATGATTTGAGTTTAAGACTCTCGTTATGTGGTGGTTTGTCTTCAGATAATCCTTGTTCTGAGGGGAAGTTTGTAGAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAAACGGCTTGATTCCAGTTCCAGTT]

[+] EMBL CD115183             [GCGGGNAATTCGATTTTAATCACCATGGCACGTTACGAAAAGTGATGTAGTACGGGAGCCTCATCTAAAAAGCTTTACACATGAAAAGGAAGTGTACCTGGAAGAACTAGTTACAGCGGAAGTCGATCAAAATATTAAAGAGGTGTATATCTATCCCCCATCTCACGGAATTTTTCCACCTCAATGTCAAGGATCATACAACACTAGTGACAGCAACTGTGTTGACTACGGTTATCGTTCCGACAACGAACACTCTCCAAGAAGCATGTCACCCGTCTATGCCCATGATTTGAGTTTAAGACTCTCGTTATGTGGTGGTTTGTCTTCAGATAATCCTTGTTCTGAGGGGAAGTTTGTAGAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTT                                                                                                        ]
[-] EMBL CD184739             [                                                                                                                                                                                                                                         ATCGTTCCGACAACGAACACTCTCCAAGAAGCATGTCACCCGTCTATGCCCATGATTTGAGTTTAAGACTCTCGTTATGTGGTGGTTTGTCTTCAGATAATCCTTGTTCTGAGGGGAAGTTTGTAGAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCAGTACTTACCCTAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAAACGGCTTGATTCCAGTTCCAGTT]




>consensus_10512#1
GCGGGNAATTCGATTTTAATCACCATGGCACGTTACGAAAAGTGATGTAGTACGGGAGCC
TCATCTAAAAAGCTTTACACATGAAAAGGAAGTGTACCTGGAAGAACTAGTTACAGCGGA
AGTCGATCAAAATATTAAAGAGGTGTATATCTATCCCCCATCTCACGGAATTTTTCCACC
TCAATGTCAAGGATCATACAACACTAGTGACAGCAACTGTGTTGACTACGGTTATCGTTC
CGACAACGAACACTCTCCAAGAAGCATGTCACCCGTCTATGCCCATGATTTGAGTTTAAG
ACTCTCGTTATGTGGTGGTTTGTCTTCAGATAATCCTTGTTCTGAGGGGAAGTTTGTAGA
GCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCCAA
TCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATTGT
CAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAACCA
GTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAAAC
ACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAAAA
ACGGCTTGATTCCAGTTCCAGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10512#0      ------------------------------------------------------------
consensus_10512#1      GCGGGNAATTCGATTTTAATCACCATGGCACGTTACGAAAAGTGATGTAGTACGGGAGCC 60
                                                                                   

consensus_10512#0      ------------------------------------------------------------
consensus_10512#1      TCATCTAAAAAGCTTTACACATGAAAAGGAAGTGTACCTGGAAGAACTAGTTACAGCGGA 120
                                                                                   

consensus_10512#0      ------------------------------------------------------------
consensus_10512#1      AGTCGATCAAAATATTAAAGAGGTGTATATCTATCCCCCATCTCACGGAATTTTTCCACC 180
                                                                                   

consensus_10512#0      ------------------------------------------------------------
consensus_10512#1      TCAATGTCAAGGATCATACAACACTAGTGACAGCAACTGTGTTGACTACGGTTATCGTTC 240
                                                                                   

consensus_10512#0      ------------------------------------------------------------
consensus_10512#1      CGACAACGAACACTCTCCAAGAAGCATGTCACCCGTCTATGCCCATGATTTGAGTTTAAG 300
                                                                                   

consensus_10512#0      ------------CAANAATTTGGCACGAGGGACAATCCTTGTTCTGAGGGGAAGTTTGTA 48
consensus_10512#1      ACTCTCGTTATGTGGTGGTTTGTCTTCA--GATAATCCTTGTTCTGAGGGGAAGTTTGTA 358
                                         **** *   *  ** ***************************

consensus_10512#0      GAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCC 108
consensus_10512#1      GAGCACATAGTTTCTTATGAAGAATTTATACGTGACCCCAACGCTATTTTATCTAATCCC 418
                       ************************************************************

consensus_10512#0      AATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATT 168
consensus_10512#1      AATCTTGTTGTTTACTTCAATGGGCGTTATTGCAATTGGCAAGTAGCTGCTCCTTCTATT 478
                       ************************************************************

consensus_10512#0      GTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAAC 228
consensus_10512#1      GTCAGTTTACTCGCCTTTCAAACACAACTACCTTATCTGACTTTGCAAAAGCTAGAGAAC 538
                       ************************************************************

consensus_10512#0      CAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAA 288
consensus_10512#1      CAGTACTTACCCAAAAAGCAGTCTCGACGTACCTCTTGGTTCAGTTGGGGTGCAAGTCAA 598
                       ************************************************************

consensus_10512#0      ACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAA 348
consensus_10512#1      ACACGAACTGCTGCTACAAACTCCGTAATCCCCGCTAAAGAAGTTGATAATGCTGAAGAA 658
                       ************************************************************

consensus_10512#0      AAACGGCTTGATTCCAGTTCCAGTTCACAACCACCTCAGGTACACACCACGCACAGAGTT 408
consensus_10512#1      AAACGGCTTGATTCCAGTTCCAGTT----------------------------------- 683
                       *************************                                   

consensus_10512#0      AATAAAATTAACAGACTTTCTTCAAGTGAAGTAGCCAGATTGAATCTCAAACCTGGACGA 468
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      AATGATATTGAGTTTCGTATCACCACAAAGTATCAAGGGACTTGCACGTGTTCAGCTTCT 528
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      ATTTATTATTGGCATTGGTATGACAAAATAGTTGTTTCTGACGTTGATGGGACCATTACA 588
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CGTAGTGATTTACTTGGACACTTGCTTCCTATGGTGGGTCGTGATTGGACACACTCTGGA 648
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      GTTGCTCGACTGTACAATCGAGTTCAAAATAACGGCTATCAGTTTCTCTATCTTTCAGCC 708
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CGAGCTCTCGGACAAGCAGGTATAACTAGGAGCTATTTAAGACAAGTCGTTCAGGATTCA 768
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      GCGTCCAGGTTGCCAGATGGACCAATACTATTGTCTCCGAATTCTCTTCTCCATGCCTTC 828
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CACCAGGAAGTCATTATTAATAAACCAGAAGTGTTTAAAACGAAATGCCTTCAAGATGTA 888
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      TGTTGTCTTTTTCCGAAGGGTTCCTCTCCACTGTATGCGGGATTCGGTAACAAGGTTAAT 948
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      GATGTTTTCGCGTATCAGAAAGCTGGGATCGAGCTTTGCCGAATATTCACAATTAACCCA 1008
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CGAGGAGAAGTTCGTAATGAGTATCAGTCCCTAAGAAGTACAAGTTATCATGAGTTGGGC 1068
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      GATTTAGTGGACCTTCACTTTCCACCTCTTTGTAAGTACCGGACTACACATATACCACAT 1128
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CCTGTTGACTATGATCCTAGTTGTGTTCTAAAGTCAGAAAATTCGACGCCAGCTGTTGCA 1188
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CATTCACCTGACACATTTGATCGCGTACTTGTTGATTTAACCACATTCTCTAGTTTTTCA 1248
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      TTTTGGAAATCTAATTACGAATTATCTTTTCCTCTTCCAAAGACACTGGAGAATTCTTGA 1308
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      TATATATATATATATATATATATATATATATATATATATAAGGTTCTTAAATACATTTTC 1368
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      AAATTGCCTTTCTTGTTGCTCGCTTCCGTTCTAGTAACGTAACTAATTTAGTATTCATCT 1428
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      TGCAAACAAACACCCATATTTTTCAACAGATTTGTCTTTCTGGTTTATTAAAAATGTTAT 1488
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      CTTTCACAGAGATTATGATTTTCTATTTTACTTACCAATTGTACCTAACTTTTCGTAAAA 1548
consensus_10512#1      ------------------------------------------------------------
                                                                                   

consensus_10512#0      ATGAACTTTCTGAGACCAATAAATTTA 1575
consensus_10512#1      ---------------------------