cluster # 10557

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Schistosoma mansoni
cluster # 10557 cluster # 10557 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10557#0 length = 1371 sequences # 11
consensus_10557#1 length = 738 sequences # 2

consensus_10557#2 length = 593 sequences # 4
consensus_10557#3 length = 517 sequences # 1

consensusID : consensus_10557#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1371
fasta sequence

                              [AGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCTAGATAGTCCGCTGTATCTCCACTAACAGACGCATTTGGAATTGACAGATTTTTTAGTTTTGTAGATGAACATATTGGCAACGACATATTGTCAGTTGGACGCTGACAGATAGAATCACCAGAAGAGATTGATGGGCTAAGAGATGGACTAAGCTGTTTTAGTGTTAATAGAGAATAGAAATACGTCGTAAAAGGATTATTAGCAAAACGAGCTGCAAACTCTTCGATTCGAGTATTAGTTGAATCGGTAGGCAGTGAATTAGAAGAATTCAGGATAGGTGTATACGCTGCAAGTGGAGTCATACTACTAATTTTATCCAAACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATGATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGTTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAGGGTCAACACAGACGTTGACAGCAGAGCTATTAGATCGCGTACAAACAGCCTCTGAAATACCAGATTGGTGATAATCGCTTTTTACTCCAGAATCATCAGGTACCAACGTGAAAAGATCCGGATGACTGGAAGGAGAACCAATACTACCGGATAAGGTATGACAATGCCCATTAGGAATAAAGTTGCCCTTTGATAACTTCAGTACATATTCTTTCTCATCAAACTCTCCATTTACAACAGCTTCGATCGTCTCATCGACTGGATCTCGTGAATGAATGTCATCAGTCAAGTTATTACATCCAGGTACGTAAAGATTTTGTTCGGTGGAGGCACTTACCACGAGTTGCTGAGGATGCGAAGATGTAATGGGTGGCTCTGAAACGTTGGCAGATTGAGGATTCGGGCTGTTTACGTTCTTAACAATAGAGGAGAATGAGTCTTGAACAACGATTGAATTATTTGCGACGCACATAGGAGTTGTCACATTTTTATTATCAATGTTAACCACACTTGATGGTTTAAGTACATCAGCCGCTGGAATAAGGAGCTATA-TTAGG--TAGATTTATAG-GTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTCT]

[+] EMBL CD116044             [AGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCTAGATAGTCCGCTGTATCTCCACTAACAGACGCATTTGGAATTGACAGATTTTTTAGTTTTGTAGATGAACATATTGGCAACGACATATTGTCAGTTGGACGCTGACAGATAGAATCACCAGAAGAGATTGATGGGCTAAGAGATGGACTAAGCTGTTTTAGTGTTAATAGAGAATAGAAATACGTCGTAAAAGGATTATTAGCAAAACGAGCTGCAAACTCTTCGATTCGAGTATTAGTTGAATCGGTAGGCAGTGAATTAGAAGAATTCAGGATAGGTGTATACGCTGCAAGTGGAGTCATACTACTAATTTTATCCAAACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATGATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGNTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTNGAGAATGATTCATTGAAATAATAGAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD116191             [AGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCTAGATAGTCCGCTGTATCTCCACTAACAGACGCATTTGGAATTGACAGATTTTTTAGTTTTGTAGATGAACATATTGGCAACGACATATTGTCAGTTGGACGCTGACAGATAGAATCACCAGAAGAGATTGATGGGCTAAGAGATGGACTAAGCTGTTTTTGTGTTAATAGAGAATAGAAATACGTCGTAAAAGGATTATTAGCAAAACGAGCTGCAAACTCTTCGATTCGAGTATTAGTTGAATCGGTAGGCAGTGAATTAGAAGAATTCAGGATAGGTGTATACGCTGCAAGTGGAGTCATACTACTAATTTTATCCAAACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATGATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGTTGCGGCATTAGCTGCGACAAACGTTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD067207             [                                                                                                                                                                                                                                                                                                                                                                                          TATACGCTGCAAGTGGAGTCATACTACTAATTTTATCCAAACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATGATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGTTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTGAAGAATGATTCATTGTAATAATAGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD066665             [                                                                                                                                                                                                                                                                                                                                                                                             ACGCTGCAAGTGGAGTCATACTACTAATTTTATCCAAACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATGATGGTTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGTTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAGGGTCAACACAGACGTTGACAGCAGAGCTATTAGATCGCGTACAAACAGCCTCTGAAATACCAGATTGGTGATAATCGCTTTTTACTCCAGAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD092708             [                                                                                                                                                                                                                                                                                                                                                                                                             CATACTACTAATTTTATCCAAACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATGATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGTTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAGGGTCAACACGGACGTTGACAGCAGAGCTATTAGATCGCGTACAAACAGCCTCTGAAATACCAGATTGGTGATAATCGCTTTTTACTCCAGAATCATCAGGTACCAACGTGAAAAGATCCGGATGACTGGAAGGAGAACCAATACTACCGGATAAGGTATGACAATGCCCATTAGGAATAAAGTTGCCCTTTGATAACTTCAGTACATATTCTTTCTCATCAAACTCTCCATTTACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD180576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTGCAGTGGAAGTGCATATATGTTGAGACGTCGATGTTGCGGCATTAGCTGCGACAAACGTTTATACATGCATAGGCGTTAGAACTGCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAGGGTCAACACAGACGTTGACAGCAGAGCTATTAGATCGCGTACAAACAGCCTCTGAAATACCAGATTGGTGATAATCGCTTTTTACTCCAGAATCATCAGGTACCAACGTGAAAAGATCCGGATGACTGGAAGGAGAACCAATACTACCGGATAAGGTATGACAATGCCCATTAGGAATAAAGTTGCCCTTTGATAACTTCAGTACATATTCTTTCTCATCAAACTCTCCATTTACAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD068228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ttgCCGGATAAGGTA  ACAATGCCCATTAGGAATAAAGTTGCCCTTTGATAACTTCAGTACATATTCTTTCTCATCAAACTCTCCATTTACAACAGCTTCGATCGTCTCATCGACTGGATCTCGTGAATGAATGTCATCAGTCAAGTTATTACATCCAGGTACGTAAAGATTTTGTTCGGTGGAGGCACTTACCACGAGTTGCTGAGGATGCGAAGATGTAATGGGTGGCTCTGAAACGTTGGCAGATTGAGGATTCGGGCTGTTTACGTTCTTAACAATAGAGGAGAATGAGTCTTGAACAACGATTGAATTATTTGCGACGCACATAGGAGTTGTCACATTTTTATTATCAATGTTAACCACACTTGATGGTTTAAGTACATCAGCCGCTGGAATAAGGAGCTATA TTAGG  TAGATTTATAG GTGTCGGAGATCAAACTCCAGAACAGGTGACAGTGGCAG                                                                                                        ]
[+] EMBL CD129346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gcacGCTATACTTAGGGCTAGATTTATAGNGTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTC ]
[+] EMBL CD129345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TA TTAGG  TAGATTTATAG GTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTC ]
[+] EMBL CD129322             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TA TTAGG  TAGATTTATAG GTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTC ]
[-] EMBL CD067517             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATACTTCT]




>consensus_10557#0
AGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAG
ATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCTAGATAGTCCGCTGTATCTCCAC
TAACAGACGCATTTGGAATTGACAGATTTTTTAGTTTTGTAGATGAACATATTGGCAACG
ACATATTGTCAGTTGGACGCTGACAGATAGAATCACCAGAAGAGATTGATGGGCTAAGAG
ATGGACTAAGCTGTTTTAGTGTTAATAGAGAATAGAAATACGTCGTAAAAGGATTATTAG
CAAAACGAGCTGCAAACTCTTCGATTCGAGTATTAGTTGAATCGGTAGGCAGTGAATTAG
AAGAATTCAGGATAGGTGTATACGCTGCAAGTGGAGTCATACTACTAATTTTATCCAAAC
TAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAGATG
ATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACGTCG
ATGTTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTGAAG
AATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAG
GGTCAACACAGACGTTGACAGCAGAGCTATTAGATCGCGTACAAACAGCCTCTGAAATAC
CAGATTGGTGATAATCGCTTTTTACTCCAGAATCATCAGGTACCAACGTGAAAAGATCCG
GATGACTGGAAGGAGAACCAATACTACCGGATAAGGTATGACAATGCCCATTAGGAATAA
AGTTGCCCTTTGATAACTTCAGTACATATTCTTTCTCATCAAACTCTCCATTTACAACAG
CTTCGATCGTCTCATCGACTGGATCTCGTGAATGAATGTCATCAGTCAAGTTATTACATC
CAGGTACGTAAAGATTTTGTTCGGTGGAGGCACTTACCACGAGTTGCTGAGGATGCGAAG
ATGTAATGGGTGGCTCTGAAACGTTGGCAGATTGAGGATTCGGGCTGTTTACGTTCTTAA
CAATAGAGGAGAATGAGTCTTGAACAACGATTGAATTATTTGCGACGCACATAGGAGTTG
TCACATTTTTATTATCAATGTTAACCACACTTGATGGTTTAAGTACATCAGCCGCTGGAA
TAAGGAGCTATATTAGGTAGATTTATAGGTGTTGGAGATAAAACTCCAGAACAGGTGACA
GTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACA
GAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTCT

consensusID : consensus_10557#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 738
fasta sequence

                              [GCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAGGGTCAACACAGACGTTGACAGCCTAAAATGAAAATATCGATAACAAACAAAACCACAAAAATGTAAGTACATTAACAGAACAGAAAAATACACATAAAATAAGTATTGTAGAGCGGTTATTTTTACAATCGAGGAAAAATGTTCAAATATTTTCAACACATTTCCAGATACTTTAGACTTTATCTATAATGTAACATTTATAAATGGGTAAAAATTAACTAATCAGATACTTAGAAATAAGCTAATGTTTAAATAGGAGGACTTATGATACTACTGGGTAGCTTAAATCAAAGGGGAGCGGAGTTTAAACTAGGGGGTTAACAGCTGAGAGTCCAACTACTTAATTACTAAACCACTGAATGATGGATAACGATAAGATCAACTCCAGGACAAAGTGAAATTGGGTTTGCAGACATCTAATGACTTCCTATCTCCATATTTTCTAGAATAATAAACACTTAGTTACCAGAGTAAGCTAAAATTTTCTCATTACTTATTACAACCTGATCTACCAAATACAGGTTTTACTTCAATCACATATTGTTTGTGTGAGGGCTAGTGATATAACTTGCTGTCCGAATGGATGTCATTCAAGTGGAGTTTGAATAAGCGGCATATTTGTTGAAAGTCAAGTGTTTTATCCATAACGCTTGACTTTCAACAAATATACC]

[+] EMBL CD116742             [GCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGACGAAGGGTCAACACAGACGTTGACAGCCTAAAATGAAAATATCGATAACAAACAAAACCACAAAAATGTAAGTACATTAACAGAACAGAAAAATACACATAAAATAAGTATTGTAGAGCGGTTATTTTTACAATCGAGGAAAAATGTTCAAATATTTTCAACACATTTCCAGATACTTTAGACTTTATCTATAATGTAACATTTATAAATGGGTAAAAATTAACTAATCAGATACTTAGAAATAAGCTAATGTTTAAATAGGAGGACTTATGATACTACTGGGTAGCTTAAATCAAAGGGGAGCGGAGTTTAAACTAGGGGGTTAACAGCTGAGAGTCCAACTACTTAATTACTAAACCA                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD092790             [                                                                                                                                                                                                                                                                                                                                                           GCTTAAATCAAAGGGGAGCGGAGTTTAAACTAGGGGGTTAACAGCTGAGAGTCCAACTACTTAATTACTAAACCACTGAATGATGGATAACGATAAGATCAACTCCAGGACAAAGTGAAATTGGGTTTGCAGACATCTAATGACTTCCTATCTCCATATTTTCTAGAATAATAAACACTTAGTTACCAGAGTAAGCTAAAATTTTCTCATTACTTATTACAACCTGATCTACCAAATACAGGTTTTACTTCAATCACATATTGTTTGTGTGAGGGCTAGTGATATAACTTGCTGTCCGAATGGATGTCATTCAAGTGGAGTTTGAATAAGCGGCATATTTGTTGAAAGTCAAGTGTTTTATCCATAACGCTTGACTTTCAACAAATATACC]




>consensus_10557#1
GCTGAAGAATGATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTG
GACGAAGGGTCAACACAGACGTTGACAGCCTAAAATGAAAATATCGATAACAAACAAAAC
CACAAAAATGTAAGTACATTAACAGAACAGAAAAATACACATAAAATAAGTATTGTAGAG
CGGTTATTTTTACAATCGAGGAAAAATGTTCAAATATTTTCAACACATTTCCAGATACTT
TAGACTTTATCTATAATGTAACATTTATAAATGGGTAAAAATTAACTAATCAGATACTTA
GAAATAAGCTAATGTTTAAATAGGAGGACTTATGATACTACTGGGTAGCTTAAATCAAAG
GGGAGCGGAGTTTAAACTAGGGGGTTAACAGCTGAGAGTCCAACTACTTAATTACTAAAC
CACTGAATGATGGATAACGATAAGATCAACTCCAGGACAAAGTGAAATTGGGTTTGCAGA
CATCTAATGACTTCCTATCTCCATATTTTCTAGAATAATAAACACTTAGTTACCAGAGTA
AGCTAAAATTTTCTCATTACTTATTACAACCTGATCTACCAAATACAGGTTTTACTTCAA
TCACATATTGTTTGTGTGAGGGCTAGTGATATAACTTGCTGTCCGAATGGATGTCATTCA
AGTGGAGTTTGAATAAGCGGCATATTTGTTGAAAGTCAAGTGTTTTATCCATAACGCTTG
ACTTTCAACAAATATACC

consensusID : consensus_10557#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 593
fasta sequence

                              [TCATCTTTTTTCTTGTTTANCACGTTCAATTACGCGCTGGACACATGAAGTGTAGTCAGACGGATCAAAGTNTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTTCAGTAGTTAGTGGATGAGAAGTCAAGTTTTGTAACTGTTGACCACTTGAAGCAGTTGTAGATGAACAAGTTATTGATAATGGGGAACTTTCCAACTTAATAACAGATGAACTGGGGGTCACATTGGTAGAAGAGTTTGGCATGACAGAAGACACCGTTACAAATGAACGTCCTGGAAACGATACGGTGGTTGTTGGTAGTATGACAGCAGTGTGATGTTGAGGTTCAGAATTAAGACTAGATGGTACAGATGAACAAGGTTCTGGTACGGAAGCTTCTTCATCAGCACGTAGTGCACTGTCAGATGAACTTAAATTAGTAGAGGCCACCGTAGAGATGGTTACTAACATGGATTGATTTATAGTCTGTACTTCAGAAGGTTGTGACGTAACATGTAACGCAGAGACTGGTGTAAACAAAGTTGGTT]

[-] EMBL CD144439             [TCATCTTTTTTCTTGTTTANCACGTTCAATTACGCGCTGGACACATGAAGTGTAGTCAGACGGATCAAAGTNTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTTCAGTAGTTAGTGGATGAGAAGTCAAGTTTTGTAACTGTTGACCACTTGAAGCAGTCGTAGATGAACAAGTTATTGATAATGGGGAACTTTCCAACTTAATAACAGAT                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD178386             [                                                                                                                                 ATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTTCAGTAGTTAGTGGATGAGAGGTCAAGTTTTGTAACTGTTGACCACTTGAAGCAGTTGTAGATGAACAAGTTATTGATAATGGGGAACTTTCCAACTTAATAACAGATGAACTGGGGGTCACATTGGTAGAAGAGTTTGGCATGACAGAAGACACCGTTACAAATGAACGTCCTGGAAACGATACGGTGGTTGTTGGTAGTATGACAGCAGTGTGATGTTGAGGTTCAGAATTAAGACTAGATGGTACAGATGAACAAGGTTCTGGTACGGAAGCTTCTTCATCAGCACGTAGTGCACTG                                                                                                                               ]
[+] EMBL CD086084             [                                                                                                                                                               AGTATTTTCAGTAGTTAGTGGATGAGAAGTCAAGTTTTGTAACTGTTGACCACTTGAAGCAGTTGTAGATGAACAAGTTATTGATAATGGGGAACTTTCCAACTTAATAACAGATGAACTGGGGGTCACATTGGTAGAAGAGTTTGGCATGACAGAAGACACCGTTACAAATGAACGTCCTGGAAACGATACGGTGGTTGTTGGTAGTATGACAGCAGTGTGATGTTGAGGTTCAGAATTAAGACTAGATGGTACAGATGAACAAGGTTCTGGTACGGAAGCTTCTTCATCAGCACGTAGTGCACTGTCAGATGAACTTAAATTAGTAGAGGCCACCGTAGAGATGGTTACTAACATGGATTGATTTATAGTCTGTACTTCAGAAGGTTGTGACGTAACATGTAACGCAGAGACTGGTGTAAACAAAGTTGGTT]
[+] EMBL CD146793             [                                                                                                                                                               AGTATTTTCAGTAGTTAGTGGATGAGAAGTCAAGTTTTGTAACTGTTGACCACTTGAAGCAGTTGTAGATGAACAAGTTATTGATAATGGGGAACTTTCCAACTTAATAACAGATGAACTGGGGGTCACATTGGTAGAAGAGTTTGGCATGACAGAAGACACCGTTACAAATGAACGTCCTGGAAACGATACGGTGGTTGTTGGTAGTATGACAGCAGTGTGATGTTGAGGTTCAGAATTAAGACTAGATGGTACAGATGAACAAGGTTCTGGTACGGAAGCTTCTTCATCAGCACGTAGTGCACTGTCAGATGAACTTAAATTAGTAGAGGCCACCGTAGAGATGGTTACTAACATGGATTGATTTATAGTCTGTACTTCAGAAGGTTGTGACGTAACATGTAACGCAGAGACTGGTGTAAACAAAGTTGGTT]




>consensus_10557#2
TCATCTTTTTTCTTGTTTANCACGTTCAATTACGCGCTGGACACATGAAGTGTAGTCAGA
CGGATCAAAGTNTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGG
AGCGGTATTATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTTCAGTAGTTAGTGG
ATGAGAAGTCAAGTTTTGTAACTGTTGACCACTTGAAGCAGTTGTAGATGAACAAGTTAT
TGATAATGGGGAACTTTCCAACTTAATAACAGATGAACTGGGGGTCACATTGGTAGAAGA
GTTTGGCATGACAGAAGACACCGTTACAAATGAACGTCCTGGAAACGATACGGTGGTTGT
TGGTAGTATGACAGCAGTGTGATGTTGAGGTTCAGAATTAAGACTAGATGGTACAGATGA
ACAAGGTTCTGGTACGGAAGCTTCTTCATCAGCACGTAGTGCACTGTCAGATGAACTTAA
ATTAGTAGAGGCCACCGTAGAGATGGTTACTAACATGGATTGATTTATAGTCTGTACTTC
AGAAGGTTGTGACGTAACATGTAACGCAGAGACTGGTGTAAACAAAGTTGGTT

consensusID : consensus_10557#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 517
fasta sequence

                              [GTCATAGATGGCGTTGAAACAGAAGCATTTTTTNTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTCTTCATCTTTTTCTTGTTTTACACGTTCAATTACGCGCTGGACATATGAAGTGTAGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTATAGGTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTCTTTCTCTTTGTTGTAATATTTCTTCATCTTTTTCTTGTTTTACACGTTCAATTACGCGCTGGACATATGAAGTGTAGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTA]

[-] EMBL CD153184             [GTCATAGATGGCGTTGAAACAGAAGCATTTTTTNTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTCTTCATCTTTTTCTTGTTTTACACGTTCAATTACGCGCTGGACATATGAAGTGTAGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTATAGGTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTCTTTCTCTTTGTTGTAATATTTCTTCATCTTTTTCTTGTTTTACACGTTCAATTACGCGCTGGACATATGAAGTGTAGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTATTATCTA]




>consensus_10557#3
GTCATAGATGGCGTTGAAACAGAAGCATTTTTTNTAGGGCGTCTCATTTTTTCTCTTTGT
TGTAATATTTCTTCATCTTTTTCTTGTTTTACACGTTCAATTACGCGCTGGACATATGAA
GTGTAGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCA
TGAGATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCAATAGGGGTAGTATTTATA
GGTGTTGGAGATAAAACTCCAGAACAGGTGACAGTGGCAGAAGTATTGGTGTGATTCGTA
GTTGTAGATGTTGTCATAGATGGCGTTGAAACAGAAGCATTTTTTTTAGGGCGTCTCATT
CTTTCTCTTTGTTGTAATATTTCTTCATCTTTTTCTTGTTTTACACGTTCAATTACGCGC
TGGACATATGAAGTGTAGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGAT
GATAAACAAGCATGAGATGTAGGAGCGGTATTATCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      AGTCAGACGGATCAAAGTTTGAATTACCGGACTGAGAAACTGATGATAAACAAGCATGAG 60
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      -----------------GTCATAGATGGCGTTGAAACAGAAGCATTTTTTNTAGGGCGTC 43
consensus_10557#0      ATGTAGGAGCGGTATTATCTAGTGAAGCAGCAACAGCTAGATAGTCCGCTGTATCTCCAC 120
consensus_10557#1      -----GCTGAAGAATGATTCATTGAAATAATAG-AGTCAGAAAACTCCTTGT-TAACAGA 53
                                                                                   

consensus_10557#2      -------------------------------TCATCTTTTTT-----CTTGTTTANCACG 24
consensus_10557#3      TCATTTTTTCTCTTTG--TTGTAATATTTCTTCATCTTTTT------CTTGTTTTACACG 95
consensus_10557#0      TAACAGACGCATTTGGAATTGACAGATTTTTTAGTTTTGTAGATGAACATATTGGCAACG 180
consensus_10557#1      CAACGTGGACGAAGGGTCAACACAGACGTTGACAGCCTAAAA-TGAAAATATCGATAACA 112
                                                            *           * *     ** 

consensus_10557#2      TTCAATTACGCGCTGGAC----ACATGAAGTGTAGTCAGACG--GATCAAAGTNTGAATT 78
consensus_10557#3      TTCAATTACGCGCTGGAC----ATATGAAGTGTAGTCAGACG--GATCAAAGTTTGAATT 149
consensus_10557#0      ACATATTGTCAGTTGGACGCTGACAGATAGAATCACCAGAAGA-GATTGATGGGCTAAGA 239
consensus_10557#1      A-ACAAAACCACAAAAATGTAAGTACATTAACAGAACAGAAAAATACACATAAAATAAGT 171
                           *           *       *           ****     *   *      **  

consensus_10557#2      ACCG--GACTGAG--------AAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTAT 128
consensus_10557#3      ACCG--GACTGAG--------AAACTGATGATAAACAAGCATGAGATGTAGGAGCGGTAT 199
consensus_10557#0      GATG--GACTAAGCTGTTTTAGTGTTAATAGAGAATAGAAATACGTCGTAAAAGGATTAT 297
consensus_10557#1      ATTGTAGAGCGGTTATTTTTACAATCGAGGAAAAATGTTCAAATATTTTCAACACATTTC 231
                          *  **                   *     **     *       *        *  

consensus_10557#2      TATCTAGTGAAGCAGCAA---CAGCAATAGGGGTAGTATTT---TCAGTAGTTAGTGGAT 182
consensus_10557#3      TATCTAGTGAAGCAGCAA---CAGCAATAGGGGTAGTATTT---ATAGGTGTTGG-AGAT 252
consensus_10557#0      TAGCAAAACGAGCTGCAAACTCTTCGATTCGAGTATTAGTTGAATCGGTAGGCAGTGAAT 357
consensus_10557#1      CAGATACTTTAGACTTTATCTATAATGTAACATTTATAAATGG-GTAAAAATTAACTAAT 290
                        *   *    **     *         *     *  **  *                 **

consensus_10557#2      ---GAGAAGTCAAGTTTTGTA-----------ACTGTTG----ACCACTTGAAGCAGTTG 224
consensus_10557#3      ---AAAACTCCAGAACAGGTG-----------ACAGTGGCAGAAGTATTGGTGTGATTCG 298
consensus_10557#0      TAGAAGAATTCAGGATAGGTGTATACGCTGCAAGTGGAGTCATACTACTAATTTTATCCA 417
consensus_10557#1      CA-GATACTTAGAAATAAGCTAAT--------GTTTAAATAGGAGGACTTATGATACTAC 341
                           * *           *                        *  * *      *    

consensus_10557#2      ---TAGATGAACAAGTTATTGATAATGGGGAACTTTCCAACTTAATAACAGATGAACTGG 281
consensus_10557#3      ---TAGTTGTAGATGTTGTCATAGATGGCG----TTGAAAC--AGAAGCATTTTTTTTAG 349
consensus_10557#0      AACTAGAACTAGATGGATTTGAAGCCGACGGTAAATGATGCGTAGAAGTCGGTAGGTTAG 477
consensus_10557#1      -----TGGGTAGCTTAAATCAAAGGGGAGCGGAGTTTAAACTAGGGGGTTAACAGCTGAG 396
                                 *       *       *        *    *                  *

consensus_10557#2      G--------G-GTCACATTGGTAGAAGAGTTTGGCATGACAGAAGACACCGTTACAAATG 332
consensus_10557#3      G--------GCGTCTCATTCTTTCTCTTTGTTGTAATATTTCTTCATCTTTTTCTTGTTT 401
consensus_10557#0      ATGATGATTGGGTCGAAACATTAGGACTTATTGCAGTGGAAGTGCATATATGTTGAGACG 537
consensus_10557#1      AGTCCAA--CTACTTAATTACTAAACCACTGAATGATGGATAACGATA-AGATCAACTCC 453
                                       *    *              *        *      *       

consensus_10557#2      AACGTCCTGGAA-ACGA--TACGGTGGTTGTTGGTA-GTATGACAGCAGTGTGA-TGTTG 387
consensus_10557#3      TACACGTTC--A-ATTA--CGCGCTGGACATATGAA-GTGTAGT--CAGACGGA-T--CA 450
consensus_10557#0      TCGATGTTGCGGCATTAGCTGCGACAAACGTTAATACATGCATAGGCGTTAGAACTGCTG 597
consensus_10557#1      AGGACAAAGTGAAATTGGGTTTG-CAGACATCTAATGACTTCCTATCTCCATATTTTCTA 512
                                    *        *       *               *        *    

consensus_10557#2      AGGTTCAGAATTA--AGACT-AGATGGTACAGATGAACAAGGTT--CTGGTACGGAAGCT 442
consensus_10557#3      AAGTTT-GAATTACCGGACTGAGAAACTGATGATAAACAAGCAT--GAGATGTAGGAGCG 507
consensus_10557#0      AAGAAT-GATTCATTGAAATAATAGAGTCAGAAAACTCCTTGTTAACAGACAACGTGGAC 656
consensus_10557#1      GAATAA-TAAACACTTAGTTACCAGAGTAAGCTAAAATTTTCTCATTACTTATTACAACC 571
                               *   *      *   *   *                                

consensus_10557#2      TCTTCATC--AGCACGTAGTGCACTGTCAGATGAACTTAAATTAGTAGAGGCCACCGTAG 500
consensus_10557#3      GTATTATC--TA------------------------------------------------ 517
consensus_10557#0      GAAGGGTC--AACACAGACGTTGACAGCAGAGCTATTAGATCGCGTACAAACAGCCTCTG 714
consensus_10557#1      TGATCTACCAAATACAGGTTTTACTTCAATCACATATTGTTTGTGTGAGGGCTAGTGATA 631
                              *                                                    

consensus_10557#2      AGATGGTTACTAACATGGATTGATTTATAGTCTGTACTTCAGAAGGTTGTG-ACGTAACA 559
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      AAATACCAGATTGGTGATAATCGCTTTTTACTCCAGAATCATCAGGTACCA-ACGTGAAA 773
consensus_10557#1      TAACTTGCTGTCCGAATGGATGTCATTCAAGTGGAGTTTGAATAAGCGGCATATTTGTTG 691
                                                                                   

consensus_10557#2      TGTAACGCAGAGACTGGTGTAAACAAAGTTGGTT-------------------------- 593
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      AGATCCGGATGACTGGAAGGAGAACCAATACTACCGGATAAGGTATGACAATGCCCATTA 833
consensus_10557#1      AAAGTCAAGTGTTTTATCCATAACGCTTGACTTTCAACAAATATACC------------- 738
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      GGAATAAAGTTGCCCTTTGATAACTTCAGTACATATTCTTTCTCATCAAACTCTCCATTT 893
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      ACAACAGCTTCGATCGTCTCATCGACTGGATCTCGTGAATGAATGTCATCAGTCAAGTTA 953
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      TTACATCCAGGTACGTAAAGATTTTGTTCGGTGGAGGCACTTACCACGAGTTGCTGAGGA 1013
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      TGCGAAGATGTAATGGGTGGCTCTGAAACGTTGGCAGATTGAGGATTCGGGCTGTTTACG 1073
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      TTCTTAACAATAGAGGAGAATGAGTCTTGAACAACGATTGAATTATTTGCGACGCACATA 1133
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      GGAGTTGTCACATTTTTATTATCAATGTTAACCACACTTGATGGTTTAAGTACATCAGCC 1193
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      GCTGGAATAAGGAGCTATATTAGGTAGATTTATAGGTGTTGGAGATAAAACTCCAGAACA 1253
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ------------------------------------------------------------
consensus_10557#3      ------------------------------------------------------------
consensus_10557#0      GGTGACAGTGGCAGAAGTATTGGTGTGATTCGTAGTTGTAGATGTTGTCATAGATGGCGT 1313
consensus_10557#1      ------------------------------------------------------------
                                                                                   

consensus_10557#2      ----------------------------------------------------------
consensus_10557#3      ----------------------------------------------------------
consensus_10557#0      TGAAACAGAAGCATTTTTTTTAGGGCGTCTCATTTTTTCTCTTTGTTGTAATATTTCT 1371
consensus_10557#1      ----------------------------------------------------------