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Schistosoma mansoni
cluster # 10586 cluster # 10586       Sequences # 18       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10586#0 length = 1258 sequences # 15  
consensus_10586#1 length = 651 sequences # 3  

consensusID : consensus_10586#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1258
fasta sequence
                              [CGAGCCAGAATTCGCCGAGGCTCAGGTGGTGTCCGTCAAGATTTCATCGTCGATATCGGATGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATATGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACCATCACAAATTTATGATGCTTCCTTAGCAGT-AAAAAATGCTATTAATCACAATGATTTGGCTGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA-CACTTCCTGCTAAAGAAAACATGCGAG-AAAAAAAGAAATCTGATGATACT-GGT-GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAAGTTCCCACTTCCTCCACAACGTACAACCTTGGTTGCAAAAAAACCACTCTCTGTTGCAAATAGCGTTGGTGT-AAAGTCTGCTCAAAAATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTTTTGGAATATTGACCTAGAACAACATGACAAGGAAAAGGAGAATGTTCCGGTTACAAATATGACTGGTACTGTAGTGAATACTCGACTCTCTTCCCGCCGCCGTCGACCTTTAAGTTTCCCTACAATTGAAATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATTGTTATTTTTATAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAACTTGTTTTTTCTACACATTTCTACAAAATAAATTATCTACATTTTTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD082642             [CGAGCCAGAATTCGCCGAGGCTCAGGTGGTGTCCGTCAAGATTTCATCGTCGATATCGGATGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATATGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACCATCACAAATTTATGATGCTTCCTTAGCAGT AAAAAATGCTATTAATCACAATGATTTGGCTGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD152270             [                                                                                                                                      ATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACCATCACAAATTTATGATGCTTCCTTAGCAGT AAAAAATGCTATTAATCACAATGATTTGGCTGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAGGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGA ACTGGGTGGATGACct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD152355             [                                                                                                                                      ATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACCATCACAAATTTATGATGCTTCCTTAGCAGT AAAAAATGCTATTAATCACAATGATTTGGCTGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGAGCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD149592             [                                                                                                                                                                                                                                  aAAGGCGAAATATCTAAAAGTGAATCTACAACACTAATTANCAGCGTTTTCCCTATCGGTTCCGTTAGCCCACCATCACAAATTTATGATGCTTCCTTAGCAGT AAAAAATGCTATTAATAACAATGATTTGGCTGATTATGATGCTACTTACAGGGATCCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTGTTCCATATGTT AAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAGAAAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD126955             [                                                                                                                                                                                                                                             ATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACCATCACAAATTTATGATGCTTCCTTAGCAGT AAAAAATGCTATTAATCACAATGATTTGGCTGATTATGATGCTACTTATAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTACCACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTATCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACatgggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD149582             [                                                                                                                                                                                                                                                                                                          CCATCACAAATTTATGATGCTTCCTTAGCAGT AAAAAATGCTATTAATAACAATGATTTGGCTGATTATGATGCTACTTACAGGGATCCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTGTTCCATATGTT AAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAGAAAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD152260             [                                                                                                                                                                                                                                                                                                                                       AGTGAAAAAATGCTATTAATCACAATGATTTGGCTGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD152335             [                                                                                                                                                                                                                                                                                                                                                            ACAATGATTTGCCTGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAAAGGGAACGNGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD152329             [                                                                                                                                                                                                                                                                                                                                                                                                               ATATGTCACATTCAAATAATAAAGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTCTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD082946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTGTTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAAGTTCCCACTTCCTCCACAACGTACAACCTTGGTTGCAAAAAAACCACTCTCTGTTGCAAATAGCGTTGGTGT AAAGTCTGCTCAAAAATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTTTTGGAATATTGACCTAGAACAACATGANCAGGAAAAGGAGAATGTTCCGGTTACAAATATGACTGGTACTGTAGTGAATACTCGACTCT                                                                                                                                                                                                                          ]
[+] EMBL BG932473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gAGAATTTATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTA CACTTCCTGCTAAAGAAAACATGCGAG AAAAAAAGAAATCTGATGATACT GGT GATGACATTAGTCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAAGTTCCCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD076240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACATCAGTTTATTTTCCACCAAAATCCACTACCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAAGTTCCCACTTCCTCCACAACGTACAACCTTGGTTGCAAAAAAACCACTCTCTGTTGCAAATAGCGTTGGTGT AAAGTCTGCTCAAAAATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTTTTGGAATATTGACCTAGAACAACATGACAAGGAAAAGGAGAATGTTCCGGTTACAAATATGACTGGTACTGTAGTGAATACTCGACTCTTTTCCCGCCGCCGTCGACCTTTAAGTTTCCCTACAATTGAAATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATTGTTATTTTTATAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAACTTGTTTTTTTTACACATTTTTACAAAATAAATTATt                                ]
[-] EMBL AI395422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       cCACAAACGTATTAAAGCAAAATCTCACTTCCCATCTACTGTTGGTTCACCGACCCGTGATGAGCGGAACTTCAAGTTCCCACTTCCTCCACAACGTACAACGTTGGTTGCAAAAAAGCCACTCTCTGTTGCAAATAGCGTTGGTGT AAAGTCTGCTCAAAAATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTTTTGGAATATTGACCTAGAACAACATGACAAGGAAAAGGAGAATGTTCCGGTTACAAATATGACTGGTACTGTAGTGAATACTCGACTCTCTTCCCGCCGCCGTCGACCTTTAAGTTTCCCTACAATTGAAATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATTGTTATTTTTATAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAACTTGTTTTTTCTACACATTTCTACAAAATAAATTATCTACATTTTTAAAAAAAAAAAAAAAAA      ]
[-] EMBL AI395508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTCTGTTGC AATAGCGTT GTGTAAAAGTCTGCTCAAAAATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTTTTGGAATATTGACCTAGAACAACATGACAAGGAAAAGGAGAATGTTCCGGTTACAAATATGACTGGTACTGTAGTGAATACTCGACTCTCTTCCCGCCGCCGTCGACCTTTAAGTTTCCCTACAATTGAAATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATTGTTATTTTTATAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAACTTGTTTTTTCTACACATTTCTACAAAATAAATTATCTACATTTTTTAAAAAAAAAAAAAAAA      ]
[-] EMBL AI395523             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gATGTTCCGGTTACAAATATGACTGGTACTGTAGTGAATACTCGACTCTCTTCCCGCCGCCGTCGACCTTTAAGTTTCCCTACAATTGAAATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATTGTTATTTTTATAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAACTTGTTTTTTCTACACATTTCTACAAAATAAATTATCTACATTTTTAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10586#0 CGAGCCAGAATTCGCCGAGGCTCAGGTGGTGTCCGTCAAGATTTCATCGTCGATATCGGA TGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATA TGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAA AGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATC TAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACC ATCACAAATTTATGATGCTTCCTTAGCAGTAAAAAATGCTATTAATCACAATGATTTGGC TGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAA AGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACCTATTGGTGCAGAATTTAT TCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAGGT TCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTACACT TCCTGCTAAAGAAAACATGCGAGAAAAAAAGAAATCTGATGATACTGGTGATGACATTAG TCTGCCTTCTGGTTTTCTCGAATCCGAAACATCAGTTTATTTTCCACCAAAATCCACTAC CAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCCATCTATTGG TGGTTCACCGACCCGTGATGAGTCGAACTTCAAGTTCCCACTTCCTCCACAACGTACAAC CTTGGTTGCAAAAAAACCACTCTCTGTTGCAAATAGCGTTGGTGTAAAGTCTGCTCAAAA ATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTTTTGGAATAT TGACCTAGAACAACATGACAAGGAAAAGGAGAATGTTCCGGTTACAAATATGACTGGTAC TGTAGTGAATACTCGACTCTCTTCCCGCCGCCGTCGACCTTTAAGTTTCCCTACAATTGA AATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATTGTTATTTTTA TAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAACTTGTTTTTTC TACACATTTCTACAAAATAAATTATCTACATTTTTAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10586#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 651
fasta sequence
                              [AGTCAAGGCGCTCGATACGGTGATGGACTCGAACAATCTTCTATCTGTCGAATATATGTTCAGTAGTTCGCTGGTTAATTTGAGGCGATCAGTCTCAAGAGAGATATCGGCCTCTGTTTCTAAAATACGACGACAGTTCCGATGTGTGCAGAGCGAATTTAGTAATGAAGTTTCTCGCTTACGTGAACAAAATAAAGCTCTCGTTCGAACTTTGCAGCAGATGGAGGAAATGATAAAAGGAAAAGAAATTGAAATATATGGGTTACGCCATCAATTGCAAAGCTTCTCGACTGGGCGGGGTGTGTGTTCTAATTGCTCAAGGGATTCTATCAAGGCTAGAAACACTTTAGTAGGAGACACTGTCTTTAACTCAACAAACAAACGCCCGCTTATGACAATTTCATCGTCGATATCGGATGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATATGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAG]

[+] EMBL CD155029             [AGTCAAGGCGCTCGATACGGTGATGGACTCGAACAATCTTCTATCTGTCGAATATATGTTCAGTAGTTCGCTGGTTAATTTGAGGCGATCAGTCTCAAGAGAGATATCGGCCTCTGTTTCTAAAATACGACGACAGTTCCGATGTGTGCAGAGCGAATTTAGTAATGAAGTTTCTCGCTTACGTGAACAAAATAAAGCTCTCGTTCGAACTTTGCAGCAGATGGAGGAAATGATAAAAGGAAAAGAAATTGAAATATATGGGTTACGCCATCAATTGCAAAGCTTCTCGACTGGGCGGGGTGTGTGTTCTAATTGCTCAAGGGATTCTATCAAGGCTAGAAACACTTTAGTAGGAGACACTGTCTTTAACTCAACAAACAAACGCCCGCTTATGACAATTTCATCGTCGATATCGGATGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATATGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAG]
[+] EMBL AI977109             [               TACGGTGATGGACTCGAACAATCTTCTATCTGTCGAATATATGTTCAGTAGTTCGCTGGATAATTTGAGGCGATCAGTCTCAAGAGAGATATCGGCCTCTGTTTCTAAAATACGACGACAGTTCCGATGTGTGCAGAGCGAATTTAGTAATGAAGTTTCTCGCTTACGTGAACAAAATAAAGCTCTCGTTCGAACTTTGCAGCAGATGGAGGAAATGATAAAAGGAAAAGAAATTGAAATATATGGGTTACGCCATCAATTGCAAAGCTTCTCGACTGGGCGGAGTGTGTGTTCTAATTGCTCAAGGGATTCTATCAAGGCTAGAAACACTCTACTAGGAGACACTGTCTTTAACTCAACAAACAAACGCCCGCTTATGACAATCTCATCGTCGATATCGGATGCGTTGTCGGCATCCAGTTTAAAT                                                                                                                                                                                                                 ]
[-] EMBL CD096473             [                                                                                                                                                           AATTTAGTAATGAAGTTTCTCGCTTACGTGAACAAAATAAAGCTCTCGTTCGAACTTTGCAGCAGATGGAGGAAATGATAAAAGGAAAAGAAATTGAAATATATGGGTTACGCCATCAATTGCAAAGCTTCTCGACTGGGCGGGGTGTGTGTTCTAATTGCTCAAGGGATTCTATCAAGGCTAGAAACACTTTAGTAGGAGACACTGTCTTTAACTCAACAAACAAACGCCCGCTTATGACAATTTCATCGTCGATATCGGATGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATATGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATT                                                                                                                                   ]


>consensus_10586#1 AGTCAAGGCGCTCGATACGGTGATGGACTCGAACAATCTTCTATCTGTCGAATATATGTT CAGTAGTTCGCTGGTTAATTTGAGGCGATCAGTCTCAAGAGAGATATCGGCCTCTGTTTC TAAAATACGACGACAGTTCCGATGTGTGCAGAGCGAATTTAGTAATGAAGTTTCTCGCTT ACGTGAACAAAATAAAGCTCTCGTTCGAACTTTGCAGCAGATGGAGGAAATGATAAAAGG AAAAGAAATTGAAATATATGGGTTACGCCATCAATTGCAAAGCTTCTCGACTGGGCGGGG TGTGTGTTCTAATTGCTCAAGGGATTCTATCAAGGCTAGAAACACTTTAGTAGGAGACAC TGTCTTTAACTCAACAAACAAACGCCCGCTTATGACAATTTCATCGTCGATATCGGATGG TTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATATGT ACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAAAGA CGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAA AAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10586#0      CGAGCCAGAATTCGCCGAGGCTCAGGTGGTGTCCGTCAAGATTTCATCGTCGATATCGGA 60
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      TGGTTTGTCGGAATCCAGTTTAAATAGTCATATTCAGCAGCCTGTAAAAAAACGTCCATA 120
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      TGTACCGGCGAACGATGTTGAAAGCGCTGATGCAGAAAACATTAACAATATAACACCAAA 180
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      AGACGTTCGCAAATCCCCTTCCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATC 240
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      TAAAAGTGAATCTACAACACTAACTAACAGCGTTTTCCCTATCGGTTCCCTTAGCCCACC 300
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      ATCACAAATTTATGATGCTTCCTTAGCAGTAAAAAATGCTATTAATCACAATGATTTGGC 360
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      TGATTATGATGCTACTTACAGGGATTCTTCCATGTTGGATATGTCACATTCAAATAATAA 420
consensus_10586#1      -AGTCAAGGCGCTCGATACGGTGATG-----GACTCGAACA----ATCTTCTATCTGTCG 50
                          * * *  ***   *** * ***         * * * *    *  *** *    *  

consensus_10586#0      AGGGAACATGTTAGAGTCTCCAAGTACTAACCGGACGGGACC--TATTGGTGCAGAATTT 478
consensus_10586#1      AATATATGTTCAGTAGTTCGCTGGT--TAATTTGAGGCGATCAGTCTCAAGAGAGATATC 108
                       *    *  *     ***   *  **  ***   ** * ** *  * *      ***  * 

consensus_10586#0      ATTCCATATGTTAAAAACCTTAACAAGTTAATCTCAGCGGATGGCCCTGACCAGGTCCAG 538
consensus_10586#1      GGCCTCTGTTTCTAAAA---TACGACGACAGTTCCGATGTGTG---CAGAGCGAATTTAG 162
                          *  * * *  ****   **  * *  * *  *   *  **   * ** *   *  **

consensus_10586#0      GTTCTTTGTCATCGACCAAAGCGTATACATCGACCGTCTTGTCGTTACTTTCATCGTACA 598
consensus_10586#1      TAATGAAGTTTCTCGCTTACGTGAACAAAATAAAGCTCTCGTTCGAACTTT------GCA 216
                              **      *  * * * * * *   *   *** **    *****       **

consensus_10586#0      CTTCCTGCTAAAGAAAACATGCGAGAAAAAAAGAAATCTGATGATACTGGTGATGACATT 658
consensus_10586#1      G---CAGATGGAGGAAATG-ATAAAAGGAAAAGAAATTGAAATATATGGGTTACGCCATC 272
                           * * *  ** ***      * *  *********   *  ***  *** * * *** 

consensus_10586#0      AGTCTGCCTTCTGGTTTTCTCGAATC--CGAAACATCAGTTT--ATTTTCCACCAAAATC 714
consensus_10586#1      AAT-----TGCAAAGCTTCTCGACTGGGCGGGGTGTGTGTTCTAATTGCTCAAGGGATTC 327
                       * *     * *     ******* *   **     *  ***   ***   **    * **

consensus_10586#0      CACTA---CCAGCGATGCATCAATAAAGCACAAACGTAATAAAGCAAAATCTCACTTCCC 771
consensus_10586#1      TATCAAGGCTAGAAACACTTTAGTAGGAGACACTGTCTTTAACTCAACAAACAAACGCCC 387
                        *  *   * **  *  * * * **    ***       ***  *** *    *   ***

consensus_10586#0      ATCTATTGGTGGTTCACCGACCCGTGATGAGTCGAACTTCAAGTTCCCACTTCCTCCACA 831
consensus_10586#1      GCTTATGACAATTTCATCG-TCGATATCGGATGGTTTGTCGGAATCCAGTTTAAATAGTC 446
                          ***      **** **  *  *   *  * *    **    ***   **        

consensus_10586#0      ACGTACAACCTTGGTTGCAAAAAAACCACTCTCTGTTGCAAATAGCGTTGGTGTAAAGTC 891
consensus_10586#1      ATATTCAGCA--GCCTGTAAAAAAACGTCCATATGTACCGGCGAACGATGTTGAAAGCGC 504
                       *  * ** *   *  ** ********  *  * ***  *    * ** ** ** **   *

consensus_10586#0      TGCTCAAAAATCGCGTAGAAAATCAGTCAGTCGAACATCACCATCGACACCTGATGGTTT 951
consensus_10586#1      TGATGCAGAAA-ACATTAACAATATAACACCAAAAGACGTTCGCAAATCCCC------TT 557
                       ** *  * **   * *  * ***    **    ** *    *    *  **       **

consensus_10586#0      TTGGAATATTGACCTAGAA-CAACATGACAAGGAAAAGGAGAATGTTCCGGTTACAAATA 1010
consensus_10586#1      CCGGAGCACCTGATGAGAGTCAATGTGAAGGCGAAATATCTAAAAGTGAATCTACAACAC 617
                         ***  *       ***  ***  ***    ****     **   *     *****   

consensus_10586#0      TGACTGGTACTGTAGTGAATACTCGACTCTCTTCCCGCCGCCGTCGACCTTTAAGTTTCC 1070
consensus_10586#1      TAACTAACAGCGTTTTCCCTA-TCGGTTCCCTTAG------------------------- 651
                       * ***   *  **  *   ** ***  ** ***                           

consensus_10586#0      CTACAATTGAAATTTCTCCCACACCAATTTAATAAGATTTACATGTAATTGTTTCTCATT 1130
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      GTTATTTTTATAAACTTTTTATCATTTGATTAACGAACCCGGTAATCGTATATTCGTAAC 1190
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      TTGTTTTTTCTACACATTTCTACAAAATAAATTATCTACATTTTTAAAAAAAAAAAAAAA 1250
consensus_10586#1      ------------------------------------------------------------
                                                                                   

consensus_10586#0      AAAAAAAA 1258
consensus_10586#1      --------
                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)