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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10636#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1224 fasta sequence
[TTAATTATTTGTTGAATTAAAGCTCATGGATCACATTGCTTTTTTTCAGCTATGGGATNTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTATTTTCCTAACGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG-GTCGTG-GGATAG-CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC---GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT-CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT-CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG-TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG-ATTATAATATGCC-TTCATGTTTCAATGTTTCTTTTTATTTT-AATCAGTTTATGTTAGGAATACAATTGG-AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT-GGGTGTGTTTAGATAACATTTATTGCTTTTCATAAATTGGT]
[-] EMBL CD132708 [TTAATTATTTGTTGAATTAAAGCTCATGGATCACATTGCTTTTTTTCAGCTATGGGATNTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTATTTTCCTAACGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTgg ]
[+] EMBL CD080496 [ CGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTAC AATTNTAANTGTATG ]
[+] EMBL CD127114 [ GGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGAGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCT ]
[+] EMBL CD183000 [ GAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCT ]
[+] EMBL CD082252 [ TGGCAGTATGTACGGGNGTCGTGNGGATAGTTTTTCTAAGAATATGGAACTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTT TTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTA TTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTNTTTTTATAGTCCTGCTCCCTTC TGTAAAGCTGACTTATGCCTAATTNTCTGGNTTNNGTTATNTAAATTGGGCTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCNNCGTTNATACATATGCATAAAATGCCCTTTGGNNATAT ATATGCCNNTCATGTTCAAATG TTCTTTTTATTTTAAATCAG TTATGNTAGGAATACANTNGGAAAATTCTCTGAGTG TATTTTCCAAAANTA TTGT ANTAANTAATTACTGGGGTGTGTTTAGAT ACATTTAT ]
[+] EMBL CD178300 [ CAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAAT TAAATACAGCCGATGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATNTCTTCGCTTCTACTTATGGCCCAACCCATTACAAATNTTAATTGTATGAATCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATAT ]
[-] EMBL CD074406 [ CTGTTATTAATGGTNNTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG ATTATAATATGCC TTCATGTTTCAATGTTTCTTTTTATTTT AATCAGTTTATGTTAGGAATACAATTGG AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT GGGTGTGTTTAGATAACATTTATTGCTTTTCATAAATTGGT]
[-] EMBL CD185990 [ TTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTT ]
[-] EMBL CD141319 [ AAT GTTTTAGGTTTATTCCCCTGGACTGATCTACCTACAGCTTT TTTTCAATATA TTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTCAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAACAGTATGATTCgatgta ]
[-] EMBL CD076508 [ TACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG ATTATAATATGCC TTCATGTTTCAATGTTTCTTTTTATTTT AATCAGTTTATGTTAGGAATACAATTGG AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT GGGTGTGTTTAGATAACATTTATT ]
[-] EMBL CD075859 [ CTAAAACTTCCCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG ATTATAATATGCC TTCATGTTTCAATGTTTCTTTTTATTTT AATCAGTTTATGTTAGGAATACAATTGG AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT GGGTGTGTTTAGATAACATTTATT ]
[-] EMBL CD182988 [ AATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGGTGGTGATAATAATATTTT CCCCTTCACTCCCAGGTATTGCGCCAAATACACGCTTTTGTTGCGCATAATATTTTTTATTGGTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTccca ]
[+] EMBL BE505151 [ TGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTTNCCCNTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTT ]
consensusID : consensus_10636#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1180 fasta sequence
[TTCTTAAACACCTGCGATGTTGGTGAAGTTTAGTGACTAGCTTGTTTGGTGTATTGGACCAGATCTTTATCATAACTAAAAATGGGTGAACTAGATCAGCTGCGTCAGGAAACAGAACAGCTTAAAAGTCAAATTAGAGAGGCACGGAGAGTTGCAGCTGATACTACATTACAACAGGCAACGGTTAATGTGGAGTATATCAGTCGTACTCAGTTGCGCAGCAGACGGACATTACGTGGACACTTGGCAAAAATTTATGCTATGCACTGGTGCTCAGATTCCCGAAACTTAGTTTCAGCTCCTCAGGACGGGAAGTTAATAGTATGGGATGGATATACTACCAACAAAGTTCATGCCATTCCTTTGAGGAGCAGTTGGGTCATGACATGCGCCTACTCTCCATCCGGAAATTATGTAGCCTGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTTCGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAATGATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTCAACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCACCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTAGTTTTTCCCCCCTTGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGGGTCGTGGGATAGCCTTCTAAGAATATGGAATTAAATAACGTTNTAACGTAACAATACTGGCACAACTCTNTCAATATAAATACAGCCGATTGCCAAACATTCAACACA]
[-] EMBL CD128736 [TTCTTAAACACCTGCGATGTTGGTGAAGTTTAGTGACTAGCTTGTTTGGTGTATTGGACCAGATCTTTATCATAACTAAAAATGGGTGAACTAGATCAGCTGCGTCAGGAAACAGAACAGCTTAAAAGTCAAATTAGAGAGGCACGGAGAGTTGCAGCTGATACTACATTACAACAGGCAACGGTTAATGTGGAGTATATCAGTCGTACTCAGTTGCGCAGCAGACGGACATTACGTGGACACTTGGCAAAAATTTATGCTATGCACTGGTGCTCAGATTCCCGAAACTTAGTTTCAGCTCCTCAGGACGGGAAGTTAATAGTATGGGATGGATATACTACCAACAAAGTTCATGCCATTCCTTTGAGGAGCAGTTGGGTCATGACATGCGCCTACTCTCCATCCGGAAATTATGTAGCCTGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTTCGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAATGATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTCAACAAATCGCCTCA ATACAGGGCACACAGGTGATG ]
[+] EMBL CD184269 [ ATTATGTAGCCTGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTTCGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAATGATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTCAACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCACCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTAGTTTTTCCCCCCTT ]
[+] EMBL CD082924 [ AGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTC ACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCACCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTA TTTTCCTAACGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGGGTCGTGGGATAGCCTTCTAAGAATATGGAATTAAATAACGTTNTAACGTAACAATACTGGCACAACTCTNTCAATATAAATACAGCCGATTGCCAAACATTCAACACA]
consensusID : consensus_10636#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence
[CNGTTGTTCTAAAACTTCCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTTCCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTCGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCGTAATTTTATGGTATGTACGGGGTCGTGGGATAGCTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCCGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAG]
[-] EMBL CD190094 [CNGTTGTTCTAAAACTTCCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTTCCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTCGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCGTAATTTTATGGTATGTACGGGGTCGTGGGATAGCTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCCGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAG]
consensusID : consensus_10636#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 447 fasta sequence
[ATGTCATCTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCTATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTATAGCGGGTCATGATAACCGCGTTTTCTGTTTCGGTGTTTCAGAAGATGGAATGGCAGTATGTACGGGGTCTGTTGGATAGCTTTATAATAATATGATATTCAATAACGTTTAGAAGTAACAATACTCGCGCGACTCTTTCAATATATATACAACAGATAGCCAACTATTTCTACTCAGTATGAGTCCTTATATATTTTCTTTGAATACACTTTCTTCGCGCATGTCATTATTGCTTTTA]
[-] EMBL CD141995 [ATGTCATCTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCTATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTATAGCGGGTCATGATAACCGCGTTTTCTGTTTCGGTGTTTCAGAAGATGGAATGGCAGTATGTACGGGGTCTGTTGGATAGCTTTATAATAATATGATATTCAATAACGTTTAGAAGTAACAATACTCGCGCGACTCTTTCAATATATATACAACAGATAGCCAACTATTTCTACTCAGTATGAGTCCTTATATATTTTCTTTGAATACACTTTCTTCGCGCATGTCATTATTGCTTTTA]
consensusID : consensus_10636#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 337 fasta sequence
[CGAGGANCANTTTCANCACAGNNTGNGNCCNNATTTATTTNCTTTGGATAAACTTNCTTCGGCCTGTTATTAATGGGNNTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTNTTNTCAATATATTCCCTCGAAAAAATAGGTTAACTNCATCAAAGGAATTATTTANGCTNAACGTNGTTCTANAACTTCCTNACTATNATAACTAGNATATGAACTTAAAGCANTNCTTGGGTNCTACTTATGGGCCAACCCATTACAAATTCTTANNTGGTATGATTCAACCGCTTGGTCAACGGAGACTNTNCTGTCNGGNGGTGGTGGATATTTATTA]
[+] EMBL SM4091 [CGAGGANCANTTTCANCACAGNNTGNGNCCNNATTTATTTNCTTTGGATAAACTTNCTTCGGCCTGTTATTAATGGGNNTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTNTTNTCAATATATTCCCTCGAAAAAATAGGTTAACTNCATCAAAGGAATTATTTANGCTNAACGTNGTTCTANAACTTCCTNACTATNATAACTAGNATATGAACTTAAAGCANTNCTTGGGTNCTACTTATGGGCCAACCCATTACAAATTCTTANNTGGTATGATTCAACCGCTTGGTCAACGGAGACTNTNCTGTCNGGNGGTGGTGGATATTTATTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10636#0 ------------------------------------------------------------
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 TTCTTAAACACCTGCGATGTTGGTGAAGTTTAGTGACTAGCTTGTTTGGTGTATTGGACC 60
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 ------------------------------------------------------------
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 AGATCTTTATCATAACTAAAAATGGGTGAACTAGATCAGCTGCGTCAGGAAACAGAACAG 120
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 ------------------------------------------------------------
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 CTTAAAAGTCAAATTAGAGAGGCACGGAGAGTTGCAGCTGATACTACATTACAACAGGCA 180
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 ------------------------------------------------------------
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 ACGGTTAATGTGGAGTATATCAGTCGTACTCAGTTGCGCAGCAGACGGACATTACGTGGA 240
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 -----------------------------------TTAATTATTTGTTGAATTAAAGCTC 25
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 CACTTGGCAAAAATTTATGCTATGCACTGGTGCTCAGATTCCCGAAACTTAGTTTCAGCT 300
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 ATGGATCACATTGCTTTTTTTCAGCTATGGGATNTAAGAGATGGCCAATGTAAGCAAACA 85
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 CCTCAGGACGGGAAGTTAATAGTATGGGATGGATATACTACCAACAAAGTTCATGCCATT 360
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 TTTCCAGGCCATGAATCTGATATCAATGCTATTATCTATTTTCCTAACGGGATGTCATTT 145
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 CCTTTGAGGAGCAGTTGGGTCATGACATGCGCCTACTCTCCATCCGGAAATTATGTAGCC 420
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 GCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTT 205
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 TGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTT 480
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 GGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGT 265
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 CGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAAT 540
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 GGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAA 325
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 GATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACT 600
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 CAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCC 385
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 GGTCAACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCA 660
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 GAAGATGGAATGGCAGTATGTACGGGGTCGTGGGATAGCTTTCTAAGAATATGGAATTAA 445
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 CCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTA 720
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 ATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCCGATTGCC 505
consensus_10636#4 -------------------------------------------------------CGAGG 5
consensus_10636#2 ------------------------------CNGTTGTTCTAAAACTTCCTTACTATTATA 30
consensus_10636#1 AGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATC 780
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 AACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTT-TGCATAAACTTTCTTCGGCC 564
consensus_10636#4 ANCANTTTCANCACAGNNTGNGNCCNNATTTATTTNCTT-TGGATAAACTTNCTTCGGCC 64
consensus_10636#2 ACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAAT 90
consensus_10636#1 TAGTTTTTCCCCCCTTGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTAT 840
consensus_10636#3 -----------------ATGTCATCTGCTACAGGTAGTGATGATGCTACTTGTCGCCTAT 43
* * * * ** ** *
consensus_10636#0 TGTTATTA---ATGGTTTTAG--GTTTATTTCCCTGGAC-TGATCTACCTACAGCT-TTA 617
consensus_10636#4 TGTTATTA---ATGGGNNTAG--GTTTATTTCCCTGGAC-TGATCTACCTACAGCT-TTN 117
consensus_10636#2 TTTAATTG---TATGATTCATCCGTTTGTTCATTGAGAC-TGTACTGTTTGTTGTTGTTG 146
consensus_10636#1 TTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTA 900
consensus_10636#3 TTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTA 103
* * * * *** * * ** * * *
consensus_10636#0 TTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTA 677
consensus_10636#4 TTNTCAATATATTCCCTCGAAAAAATAGGTTAACTNCATCAAAGGAATTATTTANGCTNA 177
consensus_10636#2 ATATTATTATTTTCCCTTTCAC--TCCGAGTTATTGCGCCAAATACACGCTTTTGTTCGC 204
consensus_10636#1 TCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTA 960
consensus_10636#3 TCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTA 163
* * * * * * * * *
consensus_10636#0 AC-GTTGTTCTAAAACTTCCTTACTATTATAACTAGTATATGAACTTAAAG--CATTTCT 734
consensus_10636#4 AC-GTNGTTCTANAACTTCCTNACTATNATAACTAGNATATGAACTTAAAG--CANTNCT 234
consensus_10636#2 GC-ATATTATTTTTTATTGTTG--TTTTGCAAATTATGGATGCTTTTTTTA--TAGTCCT 259
consensus_10636#1 ACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATA 1020
consensus_10636#3 ACTGCTATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTATAGCGGGTCATGATA 223
* * * * ** * * *
consensus_10636#0 TTGCTTCTACTTATGG-CCCAACCCAT--TACAAATTTTAATT--GTATGATTCA-TCCG 788
consensus_10636#4 TGGGTNCTACTTATGG-GCCAACCCAT--TACAAATTCTTANNTGGTATGATTCA-ACCG 290
consensus_10636#2 -GCTCCCTCCTTGTAAAGCTGACTTATG-CGTAATTTTATGGTATGTACGGGGTC-GTGG 316
consensus_10636#1 ACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGGGTC-GTGG 1079
consensus_10636#3 ACCGCGTTTTCTGTTTCGGTGTTTCAGAAGATGGAATGGCAGTATGTACGGGGTCTGTTG 283
* * * * *** * *
consensus_10636#0 TTTGTTCATTG-AGACTGTACTGTTTGTTGTTGTTGATATTAT-TATTTTCCCTTTCACT 846
consensus_10636#4 CTTGGTCAACGGAGACTNTNCTGTCNGGNGGTGGTGG-ATATT-TATTA----------- 337
consensus_10636#2 GATAGCTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACT 376
consensus_10636#1 GATAGCCTTCTAAGAATATGGAATTAAATAACGTTNTAACGTAACAATACTGGCACAACT 1139
consensus_10636#3 GATAGCTTTATAATAATATGATATTCAATAACGTTTAGAAGTAACAATACTCGCGCGACT 343
* * * * * * * * * * *
consensus_10636#0 CCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTG 906
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 CTTTCAATATAAATACAGCCGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTAT 436
consensus_10636#1 CTNTCAATATAAATACAGCCGATTGCCAAACATT-CAACACA------------------ 1180
consensus_10636#3 CTTTCAATATATATACAACAGATAGCCAACTATTTCTACTCAGTATGAGTCCTTATATAT 403
consensus_10636#0 CAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTA 966
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 TTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAG---------------- 480
consensus_10636#1 ------------------------------------------------------------
consensus_10636#3 TTTCTTTGAATACACTTTCTTCGCGCATGTCATTATTGCTTTTA---------------- 447
consensus_10636#0 ATTTTCTGGTTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTT 1026
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 ------------------------------------------------------------
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 ATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGGATTATAATATGCCTTCATGTTT 1086
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 ------------------------------------------------------------
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 CAATGTTTCTTTTTATTTTAATCAGTTTATGTTAGGAATACAATTGGAATTTCTCTGAGT 1146
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 ------------------------------------------------------------
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 GTTATTTTCCAAAATTATTTGTAATTAAATAATTACTGGGTGTGTTTAGATAACATTTAT 1206
consensus_10636#4 ------------------------------------------------------------
consensus_10636#2 ------------------------------------------------------------
consensus_10636#1 ------------------------------------------------------------
consensus_10636#3 ------------------------------------------------------------
consensus_10636#0 TGCTTTTCATAAATTGGT 1224
consensus_10636#4 ------------------
consensus_10636#2 ------------------
consensus_10636#1 ------------------
consensus_10636#3 ------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||