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Schistosoma mansoni
cluster # 10669 cluster # 10669       Sequences # 19       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10669#0 length = 1177 sequences # 15  
consensus_10669#1 length = 571 sequences # 4  

consensusID : consensus_10669#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1177
fasta sequence
                              [GAGACGCAGTGGGAGAGGAGTCATAAATTGCTTGAGAACTTCATCAGTAATCGCAGCTCGTTTTCTCTGGTGCTCTGTAACAAACTCAGTCAACAGTGTGATAAGCTCCTTTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTGGAAACGATTGAGCGAACGAAGGGGCTGCCTGAATAGCCGGGAAAGATATTTTTCCAATACAATCACTGTCACT-GAAACC-GAAAA-TCGCACGAGC-CTGATTATATGTAACCAAG-CGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAAAATCCCTATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCANATCATCGTCAATTTTTGAACATCCAAAGCGAACGATCAGCTTATCATAATCCACACCACTGCTTGAATTCGTTGACACTTCCCATGGAGTGACTATGTCATCTCCGTTA]

[-] EMBL AA791359             [GAGACGCAGTGGGAGAGGAGTCATAAATTGCTTGAGAACTTCATCAGTAATCGCAGCTCGTTTTCTCTGGTGCTCTGTAACAAACTCAGTCAACAGTGTGATAAGCTCCTTTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD200158             [                                                                          CTGTAACAAACTCAGTCAACAGTGTGATAAGCTCCTTTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTCTCCACCACGTTCCCTAAGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACCGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200154             [                                                                               ACAAACTCAGTCAACAGTGTGATAAGCTCCTTTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATAGATTTTATATCTAATTTGCTTCGGTGTGTCTGTCAGAAAAGCTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCCCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200161             [                                                                                                TGTGATAAGCTCCTTTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200130             [                                                                                                  TGATAAGCTCC TTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTCGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAGTATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCCCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200108             [                                                                                                      AAGCTCCTTTTTGATTTCACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTACGATACATCAATATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGTATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD130712             [                                                                                                                        ACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACGGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTNTTTAAGATTTTCAAAAACAGTTGGAAACGATTGAGCGAACGAAGGGGCTGCCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200159             [                                                                                                                              CAACAGTTGCCCACTGGAATAATCCTGACGTATCTGTTCTAATTNTGNATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200156             [                                                                                                                                ACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTNTGNATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACTGTTTCCACCACGTTCCCTAAGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200153             [                                                                                                                                    TTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTNTTGATCGTCTTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTCCCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCTAATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTTTGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD077651             [                                                                                                                                                                                                                                                                                                                                                                         GTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAGTCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTGGAAACGATTGAGCGAACGAAGGGGCTGCCTGAATAGCCGGGAAAGATATTTTTCCAATACAATCACTGTCACT GAAACC GAAAA TCGCACGAGC CTGATTATATGTAACCAAG CGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD091468             [                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACACGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTGGAAACGATTGAGCGAACGAAGGGGCTGCCTGAATAGCCGGGAAAGATATTTTTCCAATACAATCACTGTCACT GAAACC GAAAA TCGCACGAGC CTGATTATATGTAACCAAG CGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD097040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTGGAAACGATTGAGCGAACGAAGGGGCTGCCTGAATAGCCGGGAAAGATATTTTTCCAATACAATCACAGTCACT GAAACC GAAAA TCGCACGAGC CTGATTATATGTAACCAAG CGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAA                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD202142             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGGAAAGATATTATTGCAATACAATCACTGTCACTCGCACCCTGAAAAGTAGCACGAGCGCTGATTATATGTAACCAAGCCGTTGTATTAGGCAGACGGGACCATAAAAATCTGGGCATGTACCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAAAATCCCTATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCANATCATCGTCAATTTTTGAACA                                                                                        ]
[+] EMBL CD140499             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAAAATCCCTATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCAAATCATCGTCAATTTTTGAACATCCAAAGCGAACGATCAGCTTATCATAATCCACACCACTGCTTGAATTCGTTGACACTTCCCATGGAGTGACTATGTCATCTCCGTTA]


>consensus_10669#0 GAGACGCAGTGGGAGAGGAGTCATAAATTGCTTGAGAACTTCATCAGTAATCGCAGCTCG TTTTCTCTGGTGCTCTGTAACAAACTCAGTCAACAGTGTGATAAGCTCCTTTTTGATTTC ACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTC TTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTC CCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCT AATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTT TGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAG TCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACA CGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTGGAAACGA TTGAGCGAACGAAGGGGCTGCCTGAATAGCCGGGAAAGATATTTTTCCAATACAATCACT GTCACTGAAACCGAAAATCGCACGAGCCTGATTATATGTAACCAAGCGTTGTATTTGGCA GACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGT CTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACT AACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTAC AAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCC AAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTG TTCGATGCGTAAGATAATTTGTTCAAAATCCCTATGGGAAAAAAATATCCGACGCTTCAG TAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCANATCATCGTCAAT TTTTGAACATCCAAAGCGAACGATCAGCTTATCATAATCCACACCACTGCTTGAATTCGT TGACACTTCCCATGGAGTGACTATGTCATCTCCGTTA



consensusID : consensus_10669#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 571
fasta sequence
                              [GCCGGGAAAGATATTTTTCCAATACAATCACTGTCACTGAAACCGAAAATCGCACGAGCCTGATTATATGTAACCAAGCGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAAAATCCCTTAATCATAACTTTTCAGAATTATTCAGTCTACCTATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCAAATCATCGTCAATTTTGAACATCCAAAGCGAACGATCA]

[+] EMBL CD160212             [GCCGGGAAAGATATTTTTCCAATACAATCACTGTCACTGAAACCGAAAATCGCACGAGCCTGATTATATGTAACCAAGCGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAAAATCCCTTAATCATAACTTTTCAGAATTATTCAGTCTACCTATGGGA                                                                                                          ]
[+] EMBL CD160034             [GCCGGGAAAGATATTTTTCCAATACAATCACTGTCACTGAAACCGAAAATCGCACGAGCCTGATTATATGTAACCAAGCGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAA                                                                                                                                                         ]
[+] EMBL CD140489             [                                                                   ATGT ACCAAGCGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAACCATTTGTTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCT                                                                                                                                                                                                                               ]
[+] EMBL CD160092             [                                                                                                                                                                                                                                                                                                                                                                       TCTTCCGGTATACACAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAACTTGTTCAAAATCCCTTAATCATAACTTTTCAGAATTATTCAGTCTACCTATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCAAATCATCGTCAATTTTGAACATCCAAAGCGAACGATCA]


>consensus_10669#1 GCCGGGAAAGATATTTTTCCAATACAATCACTGTCACTGAAACCGAAAATCGCACGAGCC TGATTATATGTAACCAAGCGTTGTATTTGGCAGACGGTACGATAAAAATCTGGGCATGTT CCCATGTACTCAAAATTACTGAAGATAAATGTCTTTTTGGGATCAAAACCCATGGCGATA ATATCCTTTGCGTTTTCACGAGTTAAATGACTAACTTCTGAGATAGACAAGTTCTTCCAC AGAAACTTCTCATCATCAGTTAACTGGATTACAAGAGGGATATCAAAAACGTCCTGAAAC CATTTATTTATTATGAATGGAACAACATGTCCAAGATGTAAGGCCTCTGATGATGGACCT CTTCCGGTATACAAAAAGAACGGCTTTTTTTGTTCGATGCGTAAGATAATTTGTTCAAAA TCCCTTAATCATAACTTTTCAGAATTATTCAGTCTACCTATGGGAAAAAAATATCCGACG CTTCAGTAGGTGATGTAGAGGCTTGGGACAAATGTTTGTAAGCCTTTGAAGCAAATCATC GTCAATTTTGAACATCCAAAGCGAACGATCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10669#0      GAGACGCAGTGGGAGAGGAGTCATAAATTGCTTGAGAACTTCATCAGTAATCGCAGCTCG 60
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TTTTCTCTGGTGCTCTGTAACAAACTCAGTCAACAGTGTGATAAGCTCCTTTTTGATTTC 120
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      ACCTGTCAACAGTTTGCCACTGGAATAATCCTGACGTATCTGTTCTAATTTTTGATCGTC 180
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TTCCAAGAAAAACTTCAAATACTGGTATGATACATCAATATCACAGTTTCCACCACGTTC 240
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CCTATGTTCAGCAATTGTGTCACCACCACCAGAGTAAGCATATTTATTGATTTTATTTCT 300
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      AATTTGCTTCGGTGTGTCTGTCAGAAAAACTGATGTGTTTGGATTGCTTGCACTCATTTT 360
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TGTTTGATTTCCTTGTAAAGCGGGGAAGAATACTGAGTATATAAGAGAAGGTTTAAGTAG 420
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TCCAAGGCGCGGAGCGACGTCTCGAGTCATTCTAAAGTATGGATCTTGGTCAATAGCACA 480
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CGGAATTAAACAACCGACATCCTCTGGTTTTTTAAGATTTTCAAAAACAGTTGGAAACGA 540
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TTGAGCGAACGAAGGGGCTGCCTGAATAGCCGGGAAAGATATTTTTCCAATACAATCACT 600
consensus_10669#1      ----------------------------GCCGGGAAAGATATTTTTCCAATACAATCACT 32
                                                   ********************************

consensus_10669#0      GTCACTGAAACCGAAAATCGCACGAGCCTGATTATATGTAACCAAGCGTTGTATTTGGCA 660
consensus_10669#1      GTCACTGAAACCGAAAATCGCACGAGCCTGATTATATGTAACCAAGCGTTGTATTTGGCA 92
                       ************************************************************

consensus_10669#0      GACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGT 720
consensus_10669#1      GACGGTACGATAAAAATCTGGGCATGTTCCCATGTACTCAAAATTACTGAAGATAAATGT 152
                       ************************************************************

consensus_10669#0      CTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACT 780
consensus_10669#1      CTTTTTGGGATCAAAACCCATGGCGATAATATCCTTTGCGTTTTCACGAGTTAAATGACT 212
                       ************************************************************

consensus_10669#0      AACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTAC 840
consensus_10669#1      AACTTCTGAGATAGACAAGTTCTTCCACAGAAACTTCTCATCATCAGTTAACTGGATTAC 272
                       ************************************************************

consensus_10669#0      AAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCC 900
consensus_10669#1      AAGAGGGATATCAAAAACGTCCTGAAACCATTTATTTATTATGAATGGAACAACATGTCC 332
                       ************************************************************

consensus_10669#0      AAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTG 960
consensus_10669#1      AAGATGTAAGGCCTCTGATGATGGACCTCTTCCGGTATACAAAAAGAACGGCTTTTTTTG 392
                       ************************************************************

consensus_10669#0      TTCGATGCGTAAGATAATTTGTTCAAAATCCCT--------------------------- 993
consensus_10669#1      TTCGATGCGTAAGATAATTTGTTCAAAATCCCTTAATCATAACTTTTCAGAATTATTCAG 452
                       *********************************                           

consensus_10669#0      -------ATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAA 1046
consensus_10669#1      TCTACCTATGGGAAAAAAATATCCGACGCTTCAGTAGGTGATGTAGAGGCTTGGGACAAA 512
                              *****************************************************

consensus_10669#0      TGTTTGTAAGCCTTTGAAGCANATCATCGTCAATTTTTGAACATCCAAAGCGAACGATCA 1106
consensus_10669#1      TGTTTGTAAGCCTTTGAAGCAAATCATCGTCAATTTT-GAACATCCAAAGCGAACGATCA 571
                       ********************* *************** **********************

consensus_10669#0      GCTTATCATAATCCACACCACTGCTTGAATTCGTTGACACTTCCCATGGAGTGACTATGT 1166
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CATCTCCGTTA 1177
consensus_10669#1      -----------
                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)