|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10713#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 2545 fasta sequence
[TATACTTCAGCGTTTTGATTCGGATGCTGAGGAAGAAATTTCAACATCTACAGAATCATTTCTCAAACAATTGGCCTCATGGGACAAGGAGGAAGTTCCAGAAAAGCTTCAAGAACGAGTACATTTTTCCAAACGTATTATTGCACGCCTCTTGTCTGCCTATGAAAAAATGGTTACTCACCAGTTTCGTTTGCGTCAACTGCTTGGAAACGCTACCGAAACCGCATCAGTTTCTGTTGGATCTGAACTTAGTGATAATACTATACCTATTCATTCTAGTTCATTGGCTCCTTATGGCACACACAACCCCGATTCTGAAGGTAACAATCATTCAACTAGTTCATCTCAGGAACCTGCTTCAACAACTTGCAGTAAATCTGGTGCAGTAGATTTGCACGAGGAAATAACACTTTTAAACAAGGAAAATTTTCGTCTTCAAAGCCTTTGTACAAATTTGCATTCTAAACATCGACAAAGCAGTCTTCGCCTTCGTGAACTGCAAGACTTAGCTCAGACGAATAGTGACGCGTCAGCGGAATGGCAAGCTAAGTATGAGGATTTAGATTATAAACTTGCAGAAGCGATGAAACAAGTTACGCGTTTAGATCATCGTCTGTATGAAGCTCAGGAAAAGAACAAGAAAATGGAAGTTGAATTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGTGAAGATCCTTCAAATGTTGATGGATCAATTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCTTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT--GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAGCCGAGCTGCGGGGTGAACTGACTGATGCTAGAAACGAAATCGATAAACTCCATGCAACTATCAAAGATCTTCAGTCACAGCAAACGAAGATGCAGCAACAACGGAAGTCATCATTAACATCTCCTGTTGAACCCAATTTAAAAATGTCACCTGCTGAACGTTCACTCACTTCTCATGGAAATATTCCACTCTCTCCGAAAACATGTAAGACGGGGTTGGTT-TCTCCTGAAGAAAAAAGCTCGAGTATATCCGGATCTCTGCCGATCACGTCTTGTGGAAAATCCAAAACTTCTGCTTCTGATTGGCAAATATCAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTTAAAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTCTAAAGCAGGAAGAGAAAGAACGTTTATTGTTAACCAACTTAGCAACCTTAGAAAAAGAGCATCAGCTAGACAAAGTTCCGTGA]
[+] EMBL CD152311 [TATACTTCAGCGTTTTGATTCGGATGCTGAGGAAGAAATTTCAACATCTACAGAATCATTTCTCAAACAATTGGCCTCATGGGACAAGGAGGAAGTTCCAGAAAAGCTTCAAGAACGAGTACATTTTTCCAAACGTATTATTGCACGCCTCTTGTCTGCCTATGAAAAAATGGTTACTCACCAGTTTCGTTTGCGTCAACTGCTTGGAAACGCTACCGAAACCGCATCAGTTTCTGTTGGATCTGAACTTAGTGATAATACTATACCTATTCATTCTAGTTCATTGGCTCCTTATGGCACACACAACCCCGATTCTGAAGGTAACAATCATTCAACTAGTTCATCTCAGGAACCTGCTTCAACAACTTGCAGTAAATCTGGTGCAGTAGATTTGCACGAGGAAATAACACTTTTAAACAAGGAAAATTTTCGTCTTCAAAGCCTTTGTA ]
[+] EMBL CD182364 [ GAAAAGCTTCAAGAACGAGTACATTTTTCCAAACGTATTATTGCACGCCTCTTGTCTGCCTATGAAAAAATGGTTACTCACCAGTTTCGTTTGCGTCAACTGCTTGGAAACACTACCGAAACCGCATCAGTTTCTGTTGGATCTGAACTTAGTGATAATACTATACCTATTCATTCTAGTTCATTGGCTCCTTATGGCACACACAACCCCGATTCTGAAGGTAACAATCATTCAACTAGTTCATCTCAGGAACCTGCTTCAACAACTTGCAGTAAATCTGGTGCAGTAGATTTGCACGAGGAAATAACACTTTTAAACAn ]
[+] EMBL CD191644 [ AATAACACTTTTAAACAAGGAAAATTTTCGTCTTCAAAGCCTTTGTACAAATTTGCATTCTAAACATCGACAAAGCAGTCTTCGCCTTCGTGAACTGCAAGACTTAGCTCAGACGAATAGTGACGCGTCAGCGGAATGGCAAGCTAAGTATGAGGATTTAGATTATAAACTTGCAGAAGCGATGAAACAAGTTACGCGTTTAGATCATCGTCTGTATGAAGCTCAGGAAAAGAACAAGAAAATGGAAGTTGAATTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGTGAAGATCCTTCAAATGTTGATGGATCAATTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCTTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGA ]
[+] EMBL CD094081 [ ATTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGCGAAGATCCTTCAAATGTTGATGGATCAGTTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCCTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATG ]
[-] EMBL CD152168 [ TTATCAGCTCTCAAGTGCTCAGACTCTCCAGGTCGTGAAGATCCTTCAAATGTTGATGGATCAATTACACGGAATAAATATAATGACTTGGCTTGTGAACTGGAAGAGTACCGTGAGTTGGCAAATAATCGTGTAAATGAATTAGAACGCCTTCAACGTCACTTGGAAGACAAAGTTGCAGAATGTGCTTCATTGAATATGCAATTACGAGATATTCCCGAGCATATTATTATAGAATCTCCTCAATATCTATCCCTAAAAACTCAATTCAATATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGAT ]
[+] EMBL CD161053 [ TATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAG ]
[-] EMBL CD161282 [ ATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTTATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGT ]
[-] EMBL CD160942 [ ATTCTATATAATGAAGCTATCCAACTAAGAAGTCAGTTAGGGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAGTGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACTAAAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGT ]
[-] EMBL CD160835 [ AACTAAGAAGTCAGTTGGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACGGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACGAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTTTAATTTCTACACTCCAAACACAAAACAAACA ]
[-] EMBL CD161070 [ AACTAAGAAGTCAGTTAGAGGAAGCTAGAAGCACTATTCAAAATAACAGACACAGTCATCTAAAACAGATAGAAGAAATGGAGGCAAATGAAGCAGCTATACAAAATCAGATGCGATCTGAAATGCTCCTCATTGAAGGGCAATACTCTCAACTAAGACACAAATATGAAACTATGGAATTAGATTTCAAACAAGCATTGACGCATAATGAACAAGCTGGTCCTATCAGTTGTGAAATGCGTAGTCTAATTTCTACACTCCAAACACAAAACAAACAACT AAAGCTGAGGTGACTCGTTATCGTAGAAAATGCGAAGAAACTGTACAAGAACGTGAAATGATACGTGTGGATTTGAAATGCACAGAGGACGAGTTAGTTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGT ]
[-] EMBL CD164728 [ TTCGTGTTCGTACGGCACTTTCAGAGGCAACTGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGATAGGTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCATAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCTACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAGCCGAGCTGCGGGGTGAACTGACTGATGCTAGAAACGAA ]
[-] EMBL CD128325 [ TGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTCGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCC ]
[-] EMBL CD128359 [ TGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCACAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAAAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAttcc ]
[-] EMBL CD065496 [ TGCAGCTGTTATTGCTGCATGTGAAAAGTCGGATCAGTCGACACCATCAACCCCAC AAGCGC AATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTT GATCACCAACTGCTGATCCAGAATTAAAACC AAAATTCGAC ]
[+] EMBL CD149088 [ CATCAACCCCATAAAGCGCAAATCTGCCTCAGACTTCAGTAACAATGCCAGAT GTTGGATCACCAACTGCTGATCCAGAATTAAAACCAAAAAATTCGACTCCTATAAAAGTAGAGGAGAGTGTTAAGCATAGTTCTCCAAGTTCATCTACTGCTCGACCTGGCACAGTTACCACTTCAGCAAGCTCTCAAGTCAATGGAAGTGCACCTGAAAAAGTTTTGAAAACTGAATCTACTCCCGACTTGCGTTCTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACATGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAG ]
[-] EMBL CD138802 [ TTGAAAACTGAATCTACTCCCGACTTGCGTTGTAATCTATCGTGTTCTTCGCCATCTAATGAGATTATTCGTGATTTAAAAGAACAACTGAAGCGTTCACAAGAATCACAAAAAGAAATGTCTGTACTACTCAACGTGTATAAAGTTATTCCAAAAGACCAAAGAGACAAAGCAGCACTTCTTCAATGTGAAGCCAAGCTGCGGGGTGAACTGACTGATGCTAGAAACGAAATCGATAAACTCCATGCAACTATCAAAGATCTTCAGTCACAGCAAACGAAGATGCAGCAACAACGGAAGTCATCATTAACATCTCCTGTTGAACCCAATTTAAAAATGTCACCTGCTGAACGTTCACTCACTTCTCATGGAAATA ]
[+] EMBL CD083593 [ AATTTAAAAATGTCACCTGCTG ACGTTCACTCACTTCTCATGGAAATATTCCACTCTCTCCGAAAACATGTAAGACGGGGTTGGTT TCTCCTGAAGAAAAAAGCTCGAGTATATCCGGATCTCTGCCGATCACGTCTTGTGGAAAATCCAAAACTTCTGCTTCTGATTGGCAAATATCAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTTAAAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTCTAAAGCAGGA ]
[+] EMBL CD083488 [ GGGGTTGGTTNTCTCCTGAAGAAAAAAGCTCGAGTATATCCGGATCTCTGCCGATCACGTCTTGTGGAAAATCCAAAACTTCTGCTTCTGATTGGCAAATATCAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTT AAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTCAATCGTGCAGTTCTAAAGCAGGAAGAGA ]
[+] EMBL CD185430 [ CAGAGTTGCAAATGGAACTCTACATAGTTCGACGTAAGAGTCAATCTGTTGAAGAGCAGTTAAAACTTCACCAACAACGACTTGTAGCTGCCAAGCAGCAAGAGGATGTACTATTGAAGGAAGTGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTCTAAAGCAGGAAGAGAAAGAACGTTTATTGTTAACCAACTTA ]
[-] EMBL CD065500 [ caCAAGAGTATGTACTATTGAAGGAAATGGAAATAACTGTTCAAGCTTTTGAAGATGCACAAGAACAGAATGTTCGTCTTGTTAAAACGTTACGAGAAAAAGATGATGCTCATTTAAAGTTAATGGCAGAAAGAATGAAAACTGCTCAACTTGCTCGTTTACTGAAGGAAGATAAACAGCTTTTAGAAGAACAAATACGTCTGATGCAAGCAAAAATTGAAGCATTAAATCGTGCAGTTC AAAGCAGGAAGAGAAAGAACGTTTA TG TAACC ACTTAGCAACCTTAGAAAAAGAGCATCAGCTAGACAAAGTTCCGTGA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||