These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10768#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1739 fasta sequence [AAAGTCTGGAATCTGACGACTGTAACCGTCAAATACAATTCAACAGCAGCCACACACAATTCAGGTAAAATCTCACAGTAAGCATCGACGTGGTAACCATGGATGAAGTTTTTTACACACTTAAAGGTTATCACCGTGTGTTATCTTATCCTG-TTAATTCGA-TCATCACTATTTTTCTCGAGAAAACTTGTGCCGGGATCAGACGCTCCTGAATATGCTTGTTGATCGACTGATTTTGCCAATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCACGAAGAAGTGGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAATATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGATTGGGTCTTTCTCTCTCCAACCACCACATTTGCCTGATCAGCCAATCACTATCAGTCCTCAATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATTCCGATCTGATGGCGTTATAAGATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCAAACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCATCAAATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCTTACCAGTTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATAGAAAAAAGAACTATAACTACTGGCCGTTTCATCCTGAATATCTACGAACCACCGTTCCGGTCACAATTATGCTGTTCATCTTCATTACAAATGCTTTATTTTAAGTCGGGAAGTACTGTGATTAGAATCCGCGTTACGGCCACTGATATATGGTGTCTAAACTGCCTTTTATTTTATTTTGAAGATTTCTTAGTTACTGTTTTTATTCCACCCTGTTTGTATAAATGATTTACTGTCAGTACATACGTATCTATATACTACTGCTTTACTTCAAGCTTCCTTAAGTGTAATCATTTCGCGAAGTATATTGCACAACTTACATTTCACCATGCAAAAGAGAAACTAATTATCCTACCTCACCATATATGTATATCCCAGAAAATCTCCAGATAAGCGCCTTAGGTCTAGATTTTCGTAGTTATATGCAAATAGGAGTTTAAAGAATTAGAACTATATCAAAATCAAATTATTTGTNTTTCATTTACTTTCTAATTACAAACAAACAAGCCAAGATTT] [-] EMBL CD067496 [AAAGTCTGGAATCTGACGACTGTAACCGTCAAATACAATTCAACAGCAGCCACACACAATTCAGGTAAAATCTCACAGTAAGCATCGACGTGGTAACCATGGATGAAGTTTTTTACACACTTAAAGGTTATCACCGTGTGTTATCTTATCCTG TTAATTCGA TCATCACTATTTTTCTCGAGAAAACTTGTGCCGGGATCAGACGCTCCTGAATATGCTTGTTGATCGACTGATTTTGCCAATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCACGAAGAAGTGGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCAT ] [-] EMBL CD147861 [ ttaTTATCT TGCTGTTTTCTTCAAGTCATCACTATTTTTCTCGAGAAAACTTGTGCCGGGATCAGACGTTCCTGAATATGCTTGTTGATCGACTGATTTTGCCAATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCATGAAGAAGTGGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAATATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGATTGGGTCTTTCTCTCTCCAACCACCACATTTGCCTGATCAGCCAATCACTATCAGTCCTCAATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATT ] [+] EMBL CD111130 [ TGTTTGTGTTGAAGATATGAATGCGGGAATGCGTGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAATATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGATTGGGTCTTTCTCTCTCCAACCACCACGTTTGCCTGATCAGCCAATTACTATCAGTCCTCAATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATTCCGATCTGATGGCGTTATAAGATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCAAACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCATCAAATGTCCATTCC ] [-] EMBL CD169696 [ CAGACAAATTCCGATCTGATGGCGTTATAAGATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCAAACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCATCAAATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCT ] [+] EMBL AW017339 [ ATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCTTACCAGTTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATAGAAAAAAGAACTATAACTACTGGCCGTTTCATCCTGAATATCTACGAACCACCGTTCCGGTCACAATTATGCTGTTCATCTTCATTACAAATGCTTTATTTTAAGTCGGGAAGTACTGTGATTAGAATCCGCGTTACGGCCACTGATATATGGTGTCTAAACTGCCTTTTATTTTATTTTGAAGATTTCTTAGTTACTGTTTTTATTCCACCCTGTTTGTATAAATGATTTACTGTCAGTACATACGTATCTATATACTACTGCTTTACTTCAAGCTTCCTTAAGTGTAATCATTTCGCGAAGTATATTGCACAACTTACATTTCACCATGCAAAAGAGAAACTAATTATCCTACCTCACCATATATGTATATCCCAGAAAATCTCCAGATAAGCGCCTTAGGTCTAGATTTTCGTAGTTATATGCAAATAGGAGTTTAAAGAATTAGAACTATATCAAAATCAAATTATTTGTNTTTCATTTACTTTCTAATTACAAACAAACAAGCCAAGATTT] [+] EMBL CD080660 [ CACACTGCTCATTGGATATACAAGTGAATGAAACTGTGCTTACCAAGTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATACAAAAAAGAAC ] consensusID : consensus_10768#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1039 fasta sequence [ATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTTCAGAATCCTGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACACCGCTTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACAGAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGAGTCATCGGACAATGTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACAACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACCCGTGCATATACAACATTAGTTACCCACACATATGAATGGTACAGGGTGGCAGGGTCACAACCCTGGTCAGTCAATACGTGGAACACTCAATTCATTAAGTT] [+] EMBL CD094701 [ATGTCCATTCCATTATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCACGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCAAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTTATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTCGTTAACCAATTCTTC AACATTAGT ] [+] EMBL BG931273 [ TCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTACGAAACAGTATAATCCATATTCTCGTGTTGCACATGTGATAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAcc ] [-] EMBL CD094532 [ TATTCTCGTGTGNCACATGTGATAGTTCCTCGGTCTATAAATCAACCAAATTCAACAAATTACAATAANAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTTCAGAATCCTGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACACCGCTTCACAGTTATCGTTACAAT ] [+] EMBL CD179429 [ TAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTC ] [+] EMBL CD179428 [ TAGTTCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTC ] [+] EMBL CD064604 [ TCCTCAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAGCACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAAT ] [-] EMBL CD114233 [ AACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTGCAGAATCCTGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACACCGCTTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACAGAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGAGTCATCGGACAATGTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACAACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACCCGTGCATATACAACATTAGTTACCCACACATATGAATGGTACAGGGTGGCAGGGTCACAACCCTGGTCAGTCAATACGTGGAACACTCAATTCATTAAGTT] [-] EMBL CD199196 [ TTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACAGAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGAGTCATCGGACAATCTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACAACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACC ] consensusID : consensus_10768#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 582 fasta sequence [AACACAACAGCAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTTAGTTCTGGGATAGGAGACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAGCTGTGCTTACCAGTTATATTTTTCACCGTTATAATTAAAGCGACGGAAAGAGAAAAAAGAAAGATAACTACG] [+] EMBL CD114789 [AACACAACAGCAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTCAGTTCTGGGATAGGAGACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTA ] [+] EMBL CD114745 [AACACAACAGCAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTTAGTTCTGGGATAGGAGACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTA ] [-] EMBL CD074578 [ CAGATAATATGGTAACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATCGTCTTTGTTACCGGGGCTAATTTCATCAACTGGAAATTCTACATGCGCAGCTATTGACGACAATCAGTCTCATAAGCTTTCCAAACAAGTTGAAAAAATTACCTCTCCTGGTTCAGTTCATGATTCTGAGGATTCAGTTAGTTCTTGGATAGGAGACATGACCACCACTAGCGCCGGTGATAATGACAGTCGTAATAATTCGTCATGCACACCAACCGAACCAACTCGTATTATTCCGAAATCTGACTACGTACGAAACAAGTCTTCAACGCGAATTAAAGAAAAACTTACTGGTACATGAGTCTCCGAAATAATGAAATTCATAATTTTGTATTATCATTTACTGAAACTACAAGTGATCACCCAGTATCGTGCAGTCATTTGTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAGCTGTGCTTACCAGTTATATTTTTCACCGTTATAATTAAAGCGACGGAAAGAGAAAAAAGAAAGATAACTACG] consensusID : consensus_10768#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 479 fasta sequence [TGTAGACATAGTAGGTCATGTGATAGTTCCTTAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGT] [+] EMBL CD128030 [TGTAGACATAGTAGGTCATGTGATAGTTCCTTAGTCTATAAATCAACCAAATTCAACAAATTACAATAAAAATCAACCGTTCGGGTGGGACTGTCATCAGCGCCCGCATCTCCCAGCTGCGAACAGTACACATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGCAGTAGCTGCCATGTCAGCTGTTGCACAACAGT] [+] EMBL CD069005 [ CATTCAAGTGTAGTACCAATACGGCGTCAAACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTCATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGCTGTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAACCACTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACATTAGTCC ] consensusID : consensus_10768#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 319 fasta sequence [GTGGTTGCAACAGTATAGGATAGATCAAGTTGTTTGTATGTTGTGGAGGGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGATGACTCATATACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGTAGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATTGTAACGATAACTGTGAAGCGGTGTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTCCCACCCGAACGGTTGATTTTTATTGTAATTTGTTGAATTTGGTTGATTTATAGAC] [+] EMBL CD114358 [GTGGTTGCAACAGTATAGGATAGATCAAGTTGTTTGTATGTTGTGGAGGGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGATGACTCATATACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGTAGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATTGTAACGATAACTGTGAAGCGGTGTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTCCCACCCGAACGGTTGATTTTTATTGTAATTTGTTGAATTTGGTTGATTTATAGAC] [-] EMBL CD114586 [ TGGTTGCAACAGTATAGGATAGATCAAGTTGTTTGTATGTTGTGGAGGGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGATGACTCAGAGACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGTAGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATTGTAACGATAACTGTGAAGCGGTGTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTCCCACCCGAACGGTTGATTTTTATTGTAATTTGTTGAATTTGGTTGATTTATAGA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10768#0 AAAGTCTGGAATCTGACGACTGTAACCGTCAAATACAATTCAACAGCAGCCACACACAAT 60 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TCAGGTAAAATCTCACAGTAAGCATCGACGTGGTAACCATGGATGAAGTTTTTTACACAC 120 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TTAAAGGTTATCACCGTGTGTTATCTTATCCTGTTAATTCGATCATCACTATTTTTCTCG 180 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 AGAAAACTTGTGCCGGGATCAGACGCTCCTGAATATGCTTGTTGATCGACTGATTTTGCC 240 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 AATCGAAAAGCTTGTCAAAGCTCCTCGTTTAGCAGCTCTAAATACTACTCACGAAGAAGT 300 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 GGAAAAAGCTTTACTTGGCAGTAAGATTGTTTGTGTTGAAGATATGAATGCGGGAATGCG 360 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TGGTGTTCGCCGCATTGATGGTTATCCTGGTCTGTCCACGAATCCAGATATTTCAATAAA 420 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TATGCAACCTGATAATGGATTATCGACTTTTGCATCGTCCCAGAATTTAACCTCATTGAT 480 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TGGGTCTTTCTCTCTCCAACCACCACATTTGCCTGATCAGCCAATCACTATCAGTCCTCA 540 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 ATCCGTAGCTGTGTTGAGAACTGCTGGTTCAGACAAATTCCGATCTGATGGCGTTATAAG 600 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 ATCTGGACACATGAATCCTGAAACAAGTAAAGAGCTTCTACAAACAAGTACTTTAATTCA 660 consensus_10768#2 ---------------------------------AACACAACAG-CAGATAATATGGT--- 23 consensus_10768#1 ------------------------------------------------------------ consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 AACCCCGGTGACAACAAATGTTTGCATAGCACCTGCGTCTCA-TCAAATGTCCATTCCAT 719 consensus_10768#2 AACTGATGCTACAATAAATGTATCTCTTGCATCTGAAAATCAATCGGATAGTGGATC-GT 82 consensus_10768#1 -----------------------------------------------ATGTCCATTCCAT 13 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCA 779 consensus_10768#2 CTTTGTTACC----------GGGGCTAATTTCATCAAC-----TGGAAATTCTACATGCG 127 consensus_10768#1 TATTGTTACCTCTATGCGGTATGGAGAACTGCAGCAATATTCATATAGAATGTGCCGGCA 73 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTA 839 consensus_10768#2 CAG-----CTATTGACGACAATCAGTC-TCATAAGCTTTCCAAACAAGTTGAAAAAATTA 181 consensus_10768#1 CGGGGGGTCCTTCAGTAGTACCCTGTCGTAATACTGCTCCTTGGATATTTGAACGGCCTA 133 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CGAAACAGTATAATCCATATTCTCGT-GTTGCACATGTGATAGTTCCTCAGTCTATAAAT 898 consensus_10768#2 CCTCTC---CTGGTTCAGTTCATGAT-TCTGAGGATTCAGTTAGTTCTGGG---ATAGGA 234 consensus_10768#1 CGAAACAGTATAATCCATATTCTCGT-GTTGCACATGTGATAGTTCCTCAGTCTATAAAT 192 consensus_10768#3 -----------------TGTAGACATAGTAGGTCATGTGATAGTTCCTTAGTCTATAAAT 43 consensus_10768#4 ---------GTGGTT-GCAACAGTAT-AGGATAGATCAAGTTGTTTGTATGT-TGTGGAG 48 * ** * * * * * consensus_10768#0 CAACCAAATTCAACAAATTACAATAAAAAT--CAACCGTAATAATTCGTCATGCACACCA 956 consensus_10768#2 GACATGACTACCACTAGCGCCGGTGATAATGACAGTCGTAATAATTCGTCATGCACACCA 294 consensus_10768#1 CAACCAAATTCAACAAATTACAATAAAAAT--CAACCGTTCGGGTGGGAC-TGT-CATCA 248 consensus_10768#3 CAACCAAATTCAACAAATTACAATAAAAAT--CAACCGTTCGGGTGGGAC-TGT-CATCA 99 consensus_10768#4 GGTTCGGCACCATTAAGCCACATCTACTATCTGAGCTTAGATTGTCCGAT-GACTCATAT 107 * * * * ** * * * ** consensus_10768#0 ACCGAACCAACTCGTATTATTCCGAAATCTGA---CTACGTACGAAACAAGTCTTCAACG 1013 consensus_10768#2 ACCGAACCAACTCGTATTATTCCGAAATCTGA---CTACGTACGAAACAAGTCTTCAACG 351 consensus_10768#1 GCGCCCGCATCTCCCA--GCTGCGAA--CAGT---ACACATTCAAGTGTAGTAC-CAATA 300 consensus_10768#3 GCGCCCGCATCTCCCA--GCTGCGAA--CAGT---ACACATTCAAGTGTAGTAC-CAATA 151 consensus_10768#4 ACTGGGGCATTTTGGACTGTTTGATATCCATAGCTTTGCATCGGATACACATTCTGTTGT 167 * ** * * * * * * * * * consensus_10768#0 CGAATTAAAGAAAAACTTACTGGTACATGAGTCTC-CGAAATAATGAAATTCATAATTTT 1072 consensus_10768#2 CGAATTAAAGAAAAACTTACTGGTACATGAGTCTC-CGAAATAATGAAATTCATAATTTT 410 consensus_10768#1 CGGCGTCAA-ACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTC 359 consensus_10768#3 CGGCGTCAA-ACGCACTTGCCAAATTATTACATTCGCCAGACAGGGAATGTTATAGAGTC 210 consensus_10768#4 AGACGTTGTAAAGGGTTCTGCGCGCCAGAAGATT---GTAACGATAACTGTGA-AGCGGT 223 * * * * * * * * * * * * consensus_10768#0 GTATTAT---CATTTACTGAAACTACAAGTGAT---CACCCAGTA-TCGTGCAGTC-ATT 1124 consensus_10768#2 GTATTAT---CATTTACTGAAACTACAAGTGAT---CACCCAGTA-TCGTGCAGTC-ATT 462 consensus_10768#1 ATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGC 419 consensus_10768#3 ATATTCTGTCCCATTTCCAATACCACAAACAAGTAACACTCATCAACCTTTCAATCTAGC 270 consensus_10768#4 GTACTGTTCGCAGCTGGGAGATGCGGGCGCTGATGACAGTC-CCACCCGAACGGTTGATT 282 ** * * * * ** * * * * * * consensus_10768#0 T--GTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAACTGTGCTTAC 1182 consensus_10768#2 T--GTTCCAAGTAATTTCACACTGCTCATTGGATAGACAAGTGAATGAAGCTGTGCTTAC 520 consensus_10768#1 T--GTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAAC 477 consensus_10768#3 T--GTAGCAGCTGCTTTAGCATCAATGAGTACAAACACCAGTAATAATATTCATTCAAAC 328 consensus_10768#4 TTTATTGTAATTTGTTGAATTTGGTTGATT-TATAGAC---------------------- 319 * * * * ** * * * * * ** consensus_10768#0 CAGTTATCTTTTTCACCGTTATAATTAAAGCGACGGAAATAGAAAAAAGAACTATAACTA 1242 consensus_10768#2 CAGTTATATTTTTCACCGTTATAATTAAAGCGACGGAAAGAGAAAAAAGAAAGATAACTA 580 consensus_10768#1 CA-CTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACAT 536 consensus_10768#3 CA-CTATGGAAATCAACCGCAGTATTTCCCCAACCAGTTGTTAACCAATTCTTCAAACAT 387 consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CTGGCCGTTTCATCCTGAATATCTACGAACCACCGTTCCGGTCACAATTATGCTGTTCAT 1302 consensus_10768#2 CG---------------------------------------------------------- 582 consensus_10768#1 TAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGC 596 consensus_10768#3 TAGTCCCATTGGAGCCAACCAACAACGACCGTCGAATGCACTTTTGAATCACCTCCAAGC 447 consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CTTCATTACAAATGCTTTATTTTAAGTCGGGAAGTACTGTGATTAGAATCCGCGTTACGG 1362 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 AGTAGCTGCCATGTCAGCTGTTGCACAACAGTCGAATGCTACACCTTATTTTCAGAATCC 656 consensus_10768#3 AGTAGCTGCCATGTCAGCTGTTGCACAACAGT---------------------------- 479 consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CCACTGATATATGGTGTCTAAACTGCCTTTTATTTTATTTTGAAGATTTCTTAGTTACTG 1422 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 TGTATCTCAAACTAATCCTTTTCATATCCCCACCCCTGTACCATTGCCAGTGTACTACAC 716 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 TTTTTATTCCACCCTGTTTGTATAAATGATTTACTGTCAGTACATACGTATCTATATACT 1482 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 CGCTTCACAGTTATCGTTACAATCTTCTGGCGCGCAGAACCCTTTACAACGTCTACAACA 776 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 ACTGCTTTACTTCAAGCTTCCTTAAGTGTAATCATTTCGCGAAGTATATTGCACAACTTA 1542 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 GAATGTGTATCCGATGCAAAGCTATGGATATCAAACAGTCCAAAATGCCCCAGTCTCTGA 836 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CATTTCACCATGCAAAAGAGAAACTAATTATCCTACCTCACCATATATGTATATCCCAGA 1602 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 GTCATCGGACAATGTAAGCTCAGATAGTAGATGTGGCTTAATGGTGCCGAACCCTCCACA 896 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 AAATCTCCAGATAAGCGCCTTAGGTCTAGATTTTCGTAGTTATATGCAAATAGGAGTTTA 1662 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 ACATACAAACAACTTGATCTATCCTATACTGTTGCAACCACCCGTGCATATACAACATTA 956 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 AAGAATTAGAACTATATCAAAATCAAATTATTTGTNTTTCATTTACTTTCTAATTACAAA 1722 consensus_10768#2 ------------------------------------------------------------ consensus_10768#1 GTTACCCACACATATGAATGGTACAGGGTGGCAGGGTCACAACCCTGGTCAGTCAATACG 1016 consensus_10768#3 ------------------------------------------------------------ consensus_10768#4 ------------------------------------------------------------ consensus_10768#0 CAAACAAGCCAAGATTT------ 1739 consensus_10768#2 ----------------------- consensus_10768#1 TGGAACACTCAATTCATTAAGTT 1039 consensus_10768#3 ----------------------- consensus_10768#4 ----------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||