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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10785#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1118 fasta sequence
[TTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGTTAGATATGTTCTTTTCTAACAACTGCAGGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCATTTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATCTTTAGTTTTCCTGTCC-AAATCAAGAATGGAAAATGGACCATCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAA-AAGC-AG-TCGCCAT-ACAGCAGA-GAGCTCAAGGA-GAA-NCATCGCGGCAGGGCTTGAAT-ATGACTTCTCG-ATGTCNGCG-TGNCAGTA-TCTGA-CATTA-TGNGGCTACTTTTGNNAG-TC-TGGTA-TCATC-TACATTNGT--AAAATNTGATAGTTT]
[+] EMBL CD094533 [TTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGTTAGATATGTTCTTTTCTAACAACTGCAGGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCATTTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTG ]
[+] EMBL CD123958 [ acctgatCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCATTTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGAT AANAATGAGTT ]
[-] EMBL CD131106 [ TCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCGAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCAC ]
[+] EMBL CD080632 [ AAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCATTTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAA GAGGGCGAATGGTTGTCGATGTCTGT ATCAGTGATGGTTCTTACGAT ]
[+] EMBL CD081242 [ GGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCATTTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCC AAAGATGTTATCTTTAGTTTTCCTGTCCAAAATC AGAATGGNAAATGGACCATCGTTCAGGGGTT AAACTTGATGAGTGGGCTAANAAGC AG TCGCCAT ACAGCAGA GAGCTCAAGGA GAA NCATCGCGGCAGGGCTTGAAT ATGACTTCTCG ATGTCNGCG TGNCAGTA TCTGA CATTA TGNGGCTACTTTTGNNAG TC TGGTA TCATC TACATTNGT AAAATNTGATA ]
[-] EMBL CD156111 [ AGATTTGCTAAATGCAAATGTGAAAA TTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCATTTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATCTTTAGTTTTCCTGTCC AAATCAAGAATGGAAAATGGACCATCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAA AAGC Aa gttc ]
[-] EMBL CD141530 [ ATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATC ]
[-] EMBL CD075072 [ GTAAAAAATTGTATTATATGGGGCAACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGGAGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATCTTTAGTTTTCCTGTCC AAATCAAGAATGGAAAATGGACCATCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAA AAGCAAGTTCGCCATAACAGCAGAGGAGCTCAAGGAGGAACGCATCGCGGCAGGGCTTGAATAATGACTTCTCGAATGTCGTCGTTGTCAGTATTCTGACCATTATTGTGGCTACTTTTTGTAGTTCTTGTTATTCATCTTACATTTGTTAAAAATATGATAGTTT]
[-] EMBL CD146194 [ ATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCGCTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATCTTTAGTTTTCCTGTCC AAATCAAGAATGGAAAATGGACCATCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAA AAGCAAGTTCGCC ]
consensusID : consensus_10785#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 545 fasta sequence
[AGTACATGTTGACTGTGCTAATTTCAATAATAATAATTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA-GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTNTAGCGCGCTCACAAGAACTTGACCACATCGTGCTCAGTC]
[+] EMBL CD132783 [AGTACATGTTGACTGTGCTAATTTCAATAATAATAATTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTT ]
[+] EMBL CD097243 [ CTGTGCTAATTTCAATAATAATAATTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTT ]
[+] EMBL CD142048 [ AATTTCAATAATAATAGTTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAACCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGT ]
[+] EMBL CD133464 [ AATTTCAATAATAATAGTTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTATAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAAT ]
[+] EMBL CD098474 [ AATTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCACGAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGT ]
[-] EMBL CD141931 [ AATTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTT ]
[+] EMBL CD142023 [ TTTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGT ]
[+] EMBL AI976052 [ TGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAATAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTNTAGCGCGCTCACAAGAACTTGACCACATCGTGCTCAGTC]
[+] EMBL SMAA8299 [ GCAGCTGGGCAAATAGGGTATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTCATCAAGAAGTTATCTTGCATCTGTTTGANCTTGAACAAATGGTAGAATCTCTGAAAGGNCTTGAAATGGGACTTC ]
[+] EMBL CD150420 [ ATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATCTGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGGACTTCAGGATTGTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCA GAAGTAGCATTCAATCAAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGT ]
consensusID : consensus_10785#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 441 fasta sequence
[ACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATCTTTAGTTTTCCTGTCCAAATCAAGAATGGAAAATGGNCCATCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAAAAGCAAGTTCGCCATAACAGCAGAGGAGCTCAAGGAGGAACGCATCGCGGCAGGGCTTGAATAATGACTTCTTGAATGTCGTCGTTGTCAGTATTCTGACCATTATTGTGGCTACTTTTTGTAGTTCTTGTTATTCATCTTACATTTGTTAAAAATATGATAGTTTTTGCATTTTATTGGTCGTATTTATAAATTGTTCATAAGTAAATCACGACCAAGCTCAAAAACAAA]
[-] EMBL AI976937 [ACTAAGTAGTGCATTGTCTGCTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAATGGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATCTTTAGTTTTCCTGTCCAAATCAAGAATGGAAAATGGNCCATCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAAAAGCAAGTTCGCCATAACAGCAGAGGAGCTCAAGGAGGAACGCATCGCGGCAGGGCTTGAATAATGACTTCTTGAATGTCGTCGTTGTCAGTATTCTGACCATTATTGTGGCTACTTTTTGTAGTTCTTGTTATTCATCTTACATTTGTTAAAAATATGATAGTTTTTGCATTTTATTGGTCGTATTTATAAATTG ]
[-] EMBL CD074541 [ CTCAAGGAGGAACGCATTGCGGCAGGGCTTGAATAATGACTTCTTGAATGTCGTCGTTGTCAGTATTTTGACCATTATTGTGGCTACTTTTTGTAGTTCTTGTTATTCATCTTACATTTGTTAAAAATATGATAGTTTTTGCATTTTATTGGTCGTATTTATAAATTGTTCATAAGTAAATCACGACCAAGCTCAAAAACAAA]
consensusID : consensus_10785#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 366 fasta sequence
[CAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATTTTTAGTTTTCCGTTCCAAATCAAGAATGGAAAATGGACCTTCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAAAAGCAAGTTTGCCATAACAGCAGAGGAGCTCAAGGAGGAACGCATCGCGGCAGGGCTTGAATAATGACTTTTCGAATGTTGTTGTTGTCAGTATTTTGACCATTATTGTGGGTACTTTTTGTAGTTTTTGTTATTCATTTAACATTTGTTAAAAATATGATAGTTTTTGCATTTTATTGGTCGTATTTATAAATTGTTCATAAGTAATTCCCNAAANAAAAAANAAAAAAAAANNAANAAAAAAAAAAAAAAAAA]
[-] EMBL AI394756 [CAGTGATGGTTCTTACGATGCTCCAAAAGATGTTATTTTTAGTTTTCCGTTCCAAATCAAGAATGGAAAATGGACCTTCGTTCAGGGTTTAAAACTTGATGAGTGGGCTAAAAGCAAGTTTGCCATAACAGCAGAGGAGCTCAAGGAGGAACGCATCGCGGCAGGGCTTGAATAATGACTTTTCGAATGTTGTTGTTGTCAGTATTTTGACCATTATTGTGGGTACTTTTTGTAGTTTTTGTTATTCATTTAACATTTGTTAAAAATATGATAGTTTTTGCATTTTATTGGTCGTATTTATAAATTGTTCATAAGTAATTCCCNAAANAAAAAANAAAAAAAAANNAANAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TTGTTCAGCAAAGGATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTGCAGCTGGGCAAA 60
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TAGGATATTCACTCGCCGGGATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGTTA 120
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 GATATGTTCTTTTCTAACAACTGCAGGAAGTTATCTTGCATCTGTTTGATCTTGAACAAA 180
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATTGTGGATTTCGACTGTTAA 240
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 AGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATCAAATTGATGCTGCCCTCA 300
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAGATTTGCTAAATGCAAATG 360
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATGCTAAAAAGACTGTCAAAG 420
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCACTGATGAAGAACGCTCCTT 480
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 CTATTCCTAAAGAAAACTTTAGCGCGCTCACAAGACTTGACCACAATCGTGCTCAGTCAT 540
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 TTATAGCCAAACGTCTGGGAGTTTCATGCGATTCTGTAAAAAATTGTATTATATGGGGCA 600
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 ACCACAGCAATACGCAATTTGTCGATGTAAGTCATGCTGTGGTAAAGCAAGATGGGAAGG 660
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ------------------------------------------------------------
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 AGATTCCTGTCACTGCCGCAATTAATGATGATAACTGGATAAAAAATGAGTTCTTAAGCG 720
consensus_10785#1 ------------------------------------------------------------
consensus_10785#2 ----------------------------------------ACTAAGTAGTGCATTGTCTG 20
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 CTATCCAGAAGCGCGGGGCTGCTGTCATAGCAGCCAGGAAACTAAGTAGTGCATTGTCTG 780
consensus_10785#1 ---------AGTACATGTTGACTGTGCTAATTTCAATAATAATAATTTGTTCAGCAAAGG 51
consensus_10785#2 CTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAAT 80
consensus_10785#3 ------------------------------------------------------------
consensus_10785#0 CTGCTAAGTCTGTTTCAGACCACATGCATGACTGGTGGCTTGGAACGAAGGAGGGCGAAT 840
consensus_10785#1 ATGCCGGAGCCAATAAGAGTCTTGTTGACAGGTG-CAGCTGGGCAAATAGGATATTCACT 110
consensus_10785#2 GGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTAT-CTTT 139
consensus_10785#3 -------------------CAGTGATGGTTCTTACGATGCTCCAAAAGATGTTAT-TTTT 40
consensus_10785#0 GGGTGTCGATGTCTGTAATCAGTGATGGTTCTTACGATGCTCCAAAAGATGTTAT-CTTT 899
consensus_10785#1 CGCCGG-GATGGTTGCTCGCGGTGACATGTTCGGACCTGATCAAGAAGTTATCTTGCATC 169
* **** * ** ** * *** * * * *
consensus_10785#2 AGTTT--TCCTGTCCAAATCA-AGAATGGAAAATGGNCCATCGTTCAGGGTTTAAAACTT 196
consensus_10785#3 AGTTT--TCCGTTCCAAATCA-AGAATGGAAAATGGACCTTCGTTCAGGGTTTAAAACTT 97
consensus_10785#0 AGTTT--TCCTGTCCAAATCA-AGAATGGAAAATGGACCATCGTTCAGGGTTTAAAACTT 956
consensus_10785#1 TGTTTGATCTTGAACAAATGGTAGAATCTCTGAAAGGACTTGAAATGGAACTTCAGGATT 229
**** ** ***** ***** * * * * * ** * **
consensus_10785#2 GATGAGTG-GGCT----AAAAGCAAGTTCGC------CATAACAGCAGAGGAGCTCAAGG 245
consensus_10785#3 GATGAGTG-GGCT----AAAAGCAAGTTTGC------CATAACAGCAGAGGAGCTCAAGG 146
consensus_10785#0 GATGAGTG-GGCT----AAAAGCAG--TCGC------CATA-CAGCAGAG-AGCTCAAGG 1001
consensus_10785#1 GTGGATTTCGACTGTTAAAGAATGTGGTTGTGACTCATATACCAGAAGTAGCATTCAATC 289
* ** * * ** ** * * * *** *** ** ****
consensus_10785#2 AGGAACGCATCGCGG-CAGGGCTTGAATAATGACTTCTTGAATGTCGTCGT--TGTCAGT 302
consensus_10785#3 AGGAACGCATCGCGG-CAGGGCTTGAATAATGACTTTTCGAATGTTGTTGT--TGTCAGT 203
consensus_10785#0 AGAANC--ATCGCGG-CAGGGCTTGAATA-TGACTTCTCGA-TGTCNGCGT---GNCAGT 1053
consensus_10785#1 AAATTGATGCTGCCCTCATGGTTGGGGCTATGCCTAGGAGAGAAGGAATGGAGCGTAAAG 349
* ** ** ** * * ** ** ** * * *
consensus_10785#2 ATT--CTGACCATTATTGTGGCTACTTTTTGTAGTTCTTGTTATTCATCTTACA--TTTG 358
consensus_10785#3 ATT--TTGACCATTATTGTGGGTACTTTTTGTAGTTTTTGTTATTCATTTAACA--TTTG 259
consensus_10785#0 AT---CTGAC-ATTAT-GNGGCTACTTTTGNNAGTC--TGGTAT-CATCT-ACA--TTNG 1102
consensus_10785#1 ATTTGCTAAATGCAAATGTGAAAATTTTCAAGGAGCAAGGACAGGCTCTGGACAAGTATG 409
** * * * * * * *** * * * *** * *
consensus_10785#2 TTAAAAATAT------GATAGTTTTTGCATTTTAT--TGGTCGTATTTATAAATT---GT 407
consensus_10785#3 TTAAAAATAT------GATAGTTTTTGCATTTTAT--TGGTCGTATTTATAAATT---GT 308
consensus_10785#0 T--AAAATNT------GATAGTTT------------------------------------ 1118
consensus_10785#1 CTAAAAAGACTGTCAAAGTGGTTGTTGTGGGTAATCCTGCTAACACAAATGCACTCGCAC 469
**** * ***
consensus_10785#2 TCATAAGTAAATCACGACCAAGCTCAAAAACAAA-------------------------- 441
consensus_10785#3 TCATAAGTAATTCCCNAAANAAAAAANAAAAAAAAANNAANAAAAAAAAAAAAAAAAA-- 366
consensus_10785#0 ------------------------------------------------------------
consensus_10785#1 TGATGAAGAACGCTCCTTCTATTCCTAAAGAAAACTNTAGCGCGCTCACAAGAACTTGAC 529
consensus_10785#2 ----------------
consensus_10785#3 ----------------
consensus_10785#0 ----------------
consensus_10785#1 CACATCGTGCTCAGTC 545
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||