cluster # 10791

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Schistosoma mansoni
cluster # 10791 cluster # 10791 Sequences # 22 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10791#0 length = 1497 sequences # 13
consensus_10791#1 length = 458 sequences # 1

consensus_10791#2 length = 373 sequences # 1
consensus_10791#3 length = 372 sequences # 7

consensusID : consensus_10791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1497
fasta sequence

                              [GAGGAAGAGGAGAGAGTATCCAACTATCTTACAAATCACTATAAATACTACTACTACTACTACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAAATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTATTATCATTATTTTATTACTATTATTATCATCATCATCACTATTCATTTTTACCATAGAAAGGAATAAAAAGAAATTTAAAAAAAAGTGGCTAAAAAGGGAGGCAATTAGTCAATGATTGAGACAGTGATAAACAACTTATTGTTCAAAATTCTATGAACATCATTTGAAGAATTGAGCTTTATGTGCACATGATGCCAATTCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTATTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGATGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT---------TACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTACTCTGCCGGTACTAAATGATGAAGAAAATAA-AATGCAACAACATCTCTGGAGAGAAAACACCAACGAACCAAAATTTAAGACTGGCCAATGTATTCAAT-GTTAAACTTATCTTGTTCAAGTTTCCCTTATTTTCTCCCTCCATTTACATAAATACATATGTGTGCAATGAAGCAAGTAGCAGCCAAATCATTGTGTAATAAACTACTTTACTAATTCCTCACCACCATGATTACTACCATTTACATATGTAAAGAAGAAATCTGTGATTTATATATAGTTGAGAATACTCGTTGAGAATAAACTCCACGCCAAATT]

[+] EMBL CD066453             [GAGGAAGAGGAGAGAGTATCCAACTATCTTACAAATCACTATAAATACTACTACTACTACTACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAAATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTATTATCATTATTTTATTACTATTATTATCATCATCATCACTATTCATTTTTACCATAGAAAGGAATAAAAAGAAATTTAAAAAAAAGTGGCTAAAAAGGGAGGCAATTAGTCAATGATTGAGACAGTGATAAACAACTTATTGTTCAAAATTCTATGAACATCATTTGAAGAATTGAGCTTTATGTGCACATGATGCCAATTCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL SMAA25718            [                                             cACTATAAATACTACTACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAAATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTATTATCATTATTTTATTACTATTATTATCATCATCATCACTATTCATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD123494             [                                                                                                                                                                                                                                                                                                                                                                                            TCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTATTCACTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATCGATGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT         TACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTCAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD123496             [                                                                                                                                                                                                                                                                                                                                                                                            TCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTA TTTTTTTTCACAATTTATTGTTACTACTATGATTATTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGATGAATTTTTGTTTTAGAAAACACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT         TACTACTACTACTACTACCATTATCACTATTATTATTGAGTTATTGTTCAATACTTTTCTATGTGGTACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTNTGNCAATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI975312             [                                                                                                                                                                                                                                                                                                                                                                                            TCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTATTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGATGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTATTACTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATTAAGCTTTAAATCACTATCTATTTCTTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD123467             [                                                                                                                                                                                                                                                                                                                                                                                            TCGGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTATTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGATGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCCTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT         TACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD123511             [                                                                                                                                                                                                                                                                                                                                                                                            TCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTATTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTCGATTAATTAATTGATTGATGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT         TACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATACATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGATTCTCATTATACTCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD123526             [                                                                                                                                                                                                                                                                                                                                                                                            TCAGTCTTGGTTATCTTTGTTCATTCAATCATAATTATCAGTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGGTTATTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGATGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT         TACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGGTTCTCATTATACTCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD073815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aTATGAATCTATTGAATTGTTTGA TATTTTATTGATTGATGAACTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTTGAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTAT         TACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATAATTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTATTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTNTCCATTTCTTATCTTT                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD091382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGCATGCTGCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTACTCTGCCGCTACTAAATGATGAAGAAAATAACATTGC ACAACATCTCTGGAGAGAAAACACCAACGAACC AAATTTAAGACTGGCCAATGTATTCAATGGTTAAACTTATCTTGTTCAGGTTCCCCTTATT                                                                                                                                                                                         ]
[+] EMBL CD079384             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTACTCTGCCGGTACTAAATGATGAAGAAAATAA AATGCAACAACATCTCTGGAGAGAAAACACCAACGAACCAAAATTTAAGACTGGCCAATGTATTCAAT GCTAAACTTATCTTGTTCAAGTTTCCCTTATTTTCTCCCTCCATTTACATAAATACATATGTGTGCAATGAAGCAAGTAGCAGCCAAATCATTGTGTAATAAACTACTTTACTAATTCCTCACCACCATGATTACTACCATTTACATATGTAAAGAAGAAATCTGTGATTTATATATAGTTGAGAATACTCGTTGAGAATAAACTCCAC        ]
[-] EMBL CD079548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACTTTTTGTCAATGAATCTCTTTANTTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTATTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTACTCTGCCGGTAGTAAATGATGAAGAAAATAA AATGCAACAACATCTCTGGAGAGAAAACACCAACGAACCAAAATTTAAGACTGGCCAATGTATTCAAT GTTAAACTTATCTTGTTCAAGTTTCCCTTATTTTCTCCCTCCATTTACATAAATACATATGTGTGCAATGAAGCAAGTAGCAGCCAAATCATTGTGTAATAAACTACTTTACTAATTCCTCACCACCATGATTACTACCATTTACATATGTAAAGAAGAAATCTGTGACTTATATATAGTTGAGAATACTTGTTGAGAATGAACCTCGTGCCAAATT]
[-] EMBL CD073661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTGCTCATGTGTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTGTATAAAGCTTTAAATCACTATCTATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTACTCTGCCGGTACTAAATGATGAAGAAAATAA AATGCAACAACATGTTTGGAGAGAAAACACCAACGAACCAAAATTTAAGACTGGCCAATGTATTCAAT GTTAAATTTATCTTGTTCAAGTTTCCCTTATTTTTTCCCTCCATTTACATAAATACATATGTGTGCAATGAAGCAAGTAGCAGCCAAATCATTGTGTAATAAACTACTTTACTAATTCCTCACCACCATGATTAGTACCATTTACATATGTAAAGAAGAAATCTGTGATTTAGATATAGTTGAGAATACT AAAGAGAAT AACTCC          ]




>consensus_10791#0
GAGGAAGAGGAGAGAGTATCCAACTATCTTACAAATCACTATAAATACTACTACTACTAC
TACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAA
ATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTA
TTATCATTATTTTATTACTATTATTATCATCATCATCACTATTCATTTTTACCATAGAAA
GGAATAAAAAGAAATTTAAAAAAAAGTGGCTAAAAAGGGAGGCAATTAGTCAATGATTGA
GACAGTGATAAACAACTTATTGTTCAAAATTCTATGAACATCATTTGAAGAATTGAGCTT
TATGTGCACATGATGCCAATTCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCA
GTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTA
TTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGA
TGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTT
GAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTA
TTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTC
TATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTA
TCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACA
TCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATC
CTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTG
TAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATTTCT
TTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAGCTTAGTTGTTTATTTTTA
TAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTTACTAAAAGTCTGTGTGTG
TGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTACTCTGCCGGTACTAAATGA
TGAAGAAAATAAAATGCAACAACATCTCTGGAGAGAAAACACCAACGAACCAAAATTTAA
GACTGGCCAATGTATTCAATGTTAAACTTATCTTGTTCAAGTTTCCCTTATTTTCTCCCT
CCATTTACATAAATACATATGTGTGCAATGAAGCAAGTAGCAGCCAAATCATTGTGTAAT
AAACTACTTTACTAATTCCTCACCACCATGATTACTACCATTTACATATGTAAAGAAGAA
ATCTGTGATTTATATATAGTTGAGAATACTCGTTGAGAATAAACTCCACGCCAAATT

consensusID : consensus_10791#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 458
fasta sequence

                              [CTTACAAATCACTATAAATACTACTACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAAATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTATCATCGTTATCATTATTATTATTGTCATACATGGATTTTGACGCAGAATGTGTACGGTTTCCTCGTGGAGTGGAAAGATGTTTACCTTTGAAATTAGGATTTGTTTGCCAACTATGAAGGCTCTGGCTTCGATTTTCTCGATTGTTGTTTACTTGTTTTCTTAAAGGCAGTTGATCGTATGCAGATGATATTCCTGAGTCAAAAGTACTCGATGTATCTGAGGCAGTAATAATGGGTAACTGTTGGCTATGACAATTAGTAGACTGTTGGGGTTTATCATTTAATTGATGAATATAATTACAATTACAATAATT]

[-] EMBL CD197437             [CTTACAAATCACTATAAATACTACTACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAAATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTATCATCGTTATCATTATTATTATTGTCATACATGGATTTTGACGCAGAATGTGTACGGTTTCCTCGTGGAGTGGAAAGATGTTTACCTTTGAAATTAGGATTTGTTTGCCAACTATGAAGGCTCTGGCTTCGATTTTCTCGATTGTTGTTTACTTGTTTTCTTAAAGGCAGTTGATCGTATGCAGATGATATTCCTGAGTCAAAAGTACTCGATGTATCTGAGGCAGTAATAATGGGTAACTGTTGGCTATGACAATTAGTAGACTGTTGGGGTTTATCATTTAATTGATGAATATAATTACAATTACAATAATT]




>consensus_10791#1
CTTACAAATCACTATAAATACTACTACTACGACCAGTACTACTAATATCGCCATCACCAT
CATCTTCATTATCATTATTTGTAAATTCAATCTAATATCTAAATATTGTTAATATAAATC
ATTAACTTTCATTTATCATTACTATCATCGTTATCATTATTATTATTGTCATACATGGAT
TTTGACGCAGAATGTGTACGGTTTCCTCGTGGAGTGGAAAGATGTTTACCTTTGAAATTA
GGATTTGTTTGCCAACTATGAAGGCTCTGGCTTCGATTTTCTCGATTGTTGTTTACTTGT
TTTCTTAAAGGCAGTTGATCGTATGCAGATGATATTCCTGAGTCAAAAGTACTCGATGTA
TCTGAGGCAGTAATAATGGGTAACTGTTGGCTATGACAATTAGTAGACTGTTGGGGTTTA
TCATTTAATTGATGAATATAATTACAATTACAATAATT

consensusID : consensus_10791#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence

                              [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAAGTGATTGACAGATTCGCATCTCTTATAGCAACGTTTTGTCAATGAATCTCATTTAATGTTTGTCATAATACTGTCATCCTAGTCAAGCTCACGTCTGATACTGTCCGATATACTAATATTATTATGGCCAATTACCGTGGAGTGAGTCAGTCACTGAGATTCTTTTTACTACAAGGCTGTAAATCAGTATCACAGT]

[-] EMBL CD200062             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAAGTGATTGACAGATTCGCATCTCTTATAGCAACGTTTTGTCAATGAATCTCATTTAATGTTTGTCATAATACTGTCATCCTAGTCAAGCTCACGTCTGATACTGTCCGATATACTAATATTATTATGGCCAATTACCGTGGAGTGAGTCAGTCACTGAGATTCTTTTTACTACAAGGCTGTAAATCAGTATCACAGT]




>consensus_10791#2
TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCAT
TGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATC
GTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAAGTG
ATTGACAGATTCGCATCTCTTATAGCAACGTTTTGTCAATGAATCTCATTTAATGTTTGT
CATAATACTGTCATCCTAGTCAAGCTCACGTCTGATACTGTCCGATATACTAATATTATT
ATGGCCAATTACCGTGGAGTGAGTCAGTCACTGAGATTCTTTTTACTACAAGGCTGTAAA
TCAGTATCACAGT

consensusID : consensus_10791#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 372
fasta sequence

                              [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]

[-] EMBL CD200028             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCCATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]
[-] EMBL CD200041             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTGTGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]
[-] EMBL CD200091             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTCATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]
[-] EMBL CD200026             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]
[-] EMBL CD200057             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTCTTTTTCTATAAAGCTTTAAATCACTATCTATT]
[-] EMBL CD200092             [TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]
[-] EMBL CD200052             [TCTTTCTCTTTACTACTACTACTACTACTACTACCACTATCACTATTATTATTGATTCATTGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAATGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAATCACTATCTATT]




>consensus_10791#3
TCTTTCTCTTTACTACTACTACTACTACTACTACCATTATCACTATTATTATTGATTCAT
TGTTCAATACTTTTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATC
GTATAGATGTATGTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTG
ATTGATTGATTCACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCT
CATTATACTCTCATCCTAGTCTTGCTCATGTCTCATACTCTCAAATATACTTTATTATAA
TGGACAATTATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTAAA
TCACTATCTATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10791#0      GAGGAAGAGGAGAGAGTATCCAACTATCTTACAAATCACTATAAATACTACTACTACTAC 60
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCATTATTTGTAA 120
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      ATTCAATCTAATATCTAAATATTGTTAATATAAATCATTAACTTTCATTTATCATTACTA 180
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TTATCATTATTTTATTACTATTATTATCATCATCATCACTATTCATTTTTACCATAGAAA 240
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      GGAATAAAAAGAAATTTAAAAAAAAGTGGCTAAAAAGGGAGGCAATTAGTCAATGATTGA 300
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      GACAGTGATAAACAACTTATTGTTCAAAATTCTATGAACATCATTTGAAGAATTGAGCTT 360
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TATGTGCACATGATGCCAATTCAGTCTTTGTTATCTTTGTTCATTCAATCATAATTATCA 420
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      GTATATATTTCTTTTCATGTGTTATTTTTTTTTCACAATTTATTGTTACTACTATGATTA 480
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TTCTCTATTTTTCTTGTTGATTATGAATCTATTGAATTGTTTGATTAATTAATTGATTGA 540
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TGAATTTTTGTTTTAGAGAATACTCTCATTTACTCCTTCCCTTCTTCCTCTTTTCCCTTT 600
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      GAAAATAAATAAATCTTGTTAAGTGTTTATTAATACCTGTTATTGTTACGATTACTACTA 660
consensus_10791#3      ---------------------------------------------TCTTTCTCTTTACTA 15
consensus_10791#2      ---------------------------------------------TCTTTCTCTTTACTA 15
consensus_10791#1      ----------------------------------------------CTTACAAATCACTA 14
                                                                               ****

consensus_10791#0      TTACTACTACTACTACTACCATTATCACTATTATTATTGAT-TCATTGT--TCAATACTT 717
consensus_10791#3      CTACTACTACTACTACTACCATTATCACTATTATTATTGAT-TCATTGT--TCAATACTT 72
consensus_10791#2      CTACTACTACTACTACTACCATTATCACTATTATTATTGAT-TCATTGT--TCAATACTT 72
consensus_10791#1      TAAATACTACTACTACGACCAGTACTACTAATATCGCCATCACCATCATCTTCATTATCA 74
                         * ************ **** **  **** ***         ***  *  *** **   

consensus_10791#0      TTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTAT 777
consensus_10791#3      TTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTAT 132
consensus_10791#2      TTCTATGTGATACTTATACTGTATGCTTCATTATTATCATCAATGATCGTATAGATGTAT 132
consensus_10791#1      TTATTTGTAA-ATTCAATCTA-ATATCTAAATATTGTTAATATAAATCATTAACTTTCAT 132
                       ** * *** * * * *  **  **   * * **** * *  *   *** *  *  *  **

consensus_10791#0      GTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTC 837
consensus_10791#3      GTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAATTGATTGATTGATTC 192
consensus_10791#2      GTATCATTTAAAAGGATGACAATCATAAATTCCATTGTTATTAAAGTGATTGACAGATTC 192
consensus_10791#1      TTATCATT-ACTATCATCGTTATCATTATTATTATTGTCAT-ACATGGATT--TTGACGC 188
                        ******* *  *  **    ***** * *   ***** ** * *  ****    **  *

consensus_10791#0      ACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTC 897
consensus_10791#3      ACATCTCTTATAGCAACTTTTTGTCAATGAATCTCTTTTATTGTTTCTCATTATACTCTC 252
consensus_10791#2      GCATCTCTTATAGCAACGTTTTGTCAATGAATCTCATTTAATGTTTGTCATAATACTGTC 252
consensus_10791#1      AGAATGTGTACGGTTTCCTCGTGGAGTGGAAAGATGTTTACCTTTGAAATTAGGATTTGT 248
                         *     **  *   * *  **     ***     ****   **     *   * *   

consensus_10791#0      ATCCTAGTCTTG----CTCATGTCTC-ATACTCTCAAATAT-----ACTT-TATTATAAT 946
consensus_10791#3      ATCCTAGTCTTG----CTCATGTCTC-ATACTCTCAAATAT-----ACTT-TATTATAAT 301
consensus_10791#2      ATCCTAGTCAAG----CTCACGTCTG-ATACTGTCCGATAT-----ACTAATATTATTAT 302
consensus_10791#1      TTGCCAACTATGAAGGCTCTGGCTTCGATTTTCTCGATTGTTGTTTACTTGTTTTCTTAA 308
                        * * *     *    ***  *  *  **  * **   * *     ***  * ** * * 

consensus_10791#0      GGACAATT-ATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTA-- 1003
consensus_10791#3      GGACAATT-ATCGTGTAGTAAGTCAGTCTTTGAGTTCTTTTTTTTCTATAAAGCTTTA-- 358
consensus_10791#2      GGCCAATT-ACCGTGGAGTGAGTCAGTCACTGAGAT-TCTTTTTACTACAAGGCTGTA-- 358
consensus_10791#1      AGGCAGTTGATCGTATGCAGATGATATTCCTGAGTCAAAAGTACTCGATGTATCTGAGGC 368
                        * ** ** * ***      *     *   ****       *   * *     **     

consensus_10791#0      AATCACTATC-TATTTCTTTCTTACCAAGTGCCTATATTTTCATAAATCTTGATATTAAG 1062
consensus_10791#3      AATCACTATC-TATT--------------------------------------------- 372
consensus_10791#2      AATCAGTATCACAGT--------------------------------------------- 373
consensus_10791#1      AGTAATAATGGGTAACTGTTGGCTATGACAATTAGTAGACTGTTGGGGTTTATCATTTAA 428
                       * * *  **                                                   

consensus_10791#0      CTTAGTTGTTTATTTTTATAAACATCAGTACACACACCTGCAGTCTTCATTGTTACTGTT 1122
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      TTGATGAATATAATTACAATTACAATAATT------------------------------ 458
                                                                                   

consensus_10791#0      ACTAAAAGTCTGTGTGTGTGTGTTCTTGAAGTTGTTCATTTTCCATTTCTTATCTTTTAC 1182
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TCTGCCGGTACTAAATGATGAAGAAAATAAAATGCAACAACATCTCTGGAGAGAAAACAC 1242
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      CAACGAACCAAAATTTAAGACTGGCCAATGTATTCAATGTTAAACTTATCTTGTTCAAGT 1302
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TTCCCTTATTTTCTCCCTCCATTTACATAAATACATATGTGTGCAATGAAGCAAGTAGCA 1362
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      GCCAAATCATTGTGTAATAAACTACTTTACTAATTCCTCACCACCATGATTACTACCATT 1422
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      TACATATGTAAAGAAGAAATCTGTGATTTATATATAGTTGAGAATACTCGTTGAGAATAA 1482
consensus_10791#3      ------------------------------------------------------------
consensus_10791#2      ------------------------------------------------------------
consensus_10791#1      ------------------------------------------------------------
                                                                                   

consensus_10791#0      ACTCCACGCCAAATT 1497
consensus_10791#3      ---------------
consensus_10791#2      ---------------
consensus_10791#1      ---------------