|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 922 fasta sequence
[TGACTGGGGATAACCTAGCGGCTCAGGAATGCGTGTAGGTAGAGGGCAGGGGCCACGAATAGCTCCGACAGAAGCACCTCAAGATTCAGTGAGTGATTTGAATGCTCCCAGAGGGTCAAGCTTTGAGCCTAGAGGACGTGGGAGAGGCAGAGGAAGAGGAATGTTTGGTCGAGGTCGTGGGATGCCATTCAATTCAAATCGAGACTTCGAAAATCAGGATGGCCCAGATCGTCAGGGTCCAAGACAATATGGTCGAAGAGATGGGAATTGGAATTCTCAGGATGTTGATGGTCTAATAATGCCTGAGAGTGGTGACTCAGAGCAAGTTGTGCGTTTCGCAGACGACCGTAACGAAGTCGAGGACCAGCCAGAGCATGCCACAGCTGAGAATGAGGAGGGTGTGGTTGTCGGCACAGAAACCCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGAAGAATACAAAGCTATGCGTCAGTCTTCCAAACCAGCCGTTTT-ATTAAACAACAAAGGACTACGCAAAGCTAATGACGGCAAAGATGTGTTTGCAAACATGGTGGCTCACAGAAAAATACAAGAGGTCTCCGAAGATGTCTACGAGGTGGAGGAGAAGGAAAACGAGCCTGAGATTCCATCTAGGAGCATCAGTCGATCGATATTGATTTCTCTTTCGCTGACAACTTTGGAAACCGTAGAAGAGGTGG-ACGAGGATTCGAAAGCAGAGGGTTCGATCGTGGGCGTGGTGTTGCACGCGGTGCAGGACCAAGAAGTGAACGTGGGGGTCGAGGAAGAGGTCAGATAAGGAGTGACGGAAGAGGTCGTGGTTTCGGCCGTGTTTTGCCATTCAATTCAAATCGAGACTTCGAAAATCAGGATGGCCCAGATCGTCAGGGTCCAAGACAATATGGTCGAAGAGATGGGA]
[+] EMBL CD147529 [TGACTGGGGATAACCTAGCGGCTCAGGAATGCGTGTAGGTAGAGGGCAGGGGCCACGAATAGCTCCGACAGAAGCACCTCAAGATTCAGTGAGTGATTTGAATGCTCCCAGAGGGTCAAGCTTTGAGCCTAGAGGACGTGGGAGAGGCAGAGGAAGAGGAATGTTTGGTCGAGGTCGTGGGATGCCATTCAATTCAAATCGAGACTTCGAAAATCAGGATGGCCCAGATCGTCAGGGTCCAAGACAATATGGTCGAAGAGATGGGAATTGGAATTCTCAGGATGTTGATGGTCTAATAATGCCTGAGAGTGGTGACTCAGAGCAAGTTGTGCGTTTCGCAGACGACCGTAACGAAGTCGAGGACCAGCCAGAGCATGCCACAGCTGAGAATGAGGAGGGTGTGGTTGTCGGCACAGAAACCCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGAAGAATACAA ]
[+] EMBL CD157976 [ AGAGCATGCCACAGCTGAGAATGAGGAGGGTGTGGTTGTCGGCACAGAAACCCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGAAGAATACAAAGCTATGCGTCAGTCTTCCAAACCAGCCGTTTTAATTAAACAACAAAGGACTACGCAAAGCTAATGACGGCAAAGATGTGTTTGCAAACATGGTGGCTCACAGAAAAATACAAGAGGTCTCCGAAGATGTCTACGAGGTGGAGGAGAAGGAAAACGAGCCTGAGATTCCATCTAGGAGCATCAGTCGATCGATATTGATTGCTCTTTCGCTGACAACTNTGGAAACCGTACAAGA GTGGNACGAGNNATCGAA ]
[+] EMBL CD158066 [ AGAGCATGCCACAGCTGAGAATGAGGAGGGTGTGGTTGTCGGCACAGAAACCCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGAAGAATACAAAGCTATGCGTCAGTCTTCCAAACCAGCCGTTTT ATTAAACAACAAAGGACTACGCAAAGCTAATGACGGCAAAGATGTGTTTGCAAACATGGTGGCTCACAGAAAAATACAAGAGGTCTCCGAAGATGTCTACGAGGTGGAGGAGAAGGAAAACGAGCCTGAGATTCCATCTAGGAGCATCAGTCGATCGATATTGATTTCTCTTTCGCTGACAACTTTGGAAACCGTAGAAGAGGTGG ACGAGGATTCGAA ]
[+] EMBL CD158183 [ AGAGCATGCCACAGCTGAGAATGAGGAGGGTGTGGTTGTCGGCACAGAAACCCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGAGGAATACAAAGCTATGCGTCAGTCTTCCAAACCAGCCGTTTT ATTAAACAACAAAGGACTACGCAAAGCTAATGACGGCGAAGATGTGTTTGCAAACATGGTGGCTCACAGAAAAATACAAGAGGTCTCCGAAGATGTCTACGAGGTGGAGGAGAAGGAAAACGAGCCTGAGATTCCATCTAGGAGCATCAGTCGATCGATATTGATTTCTCTTTCGCTGACAACTTTGGAAACCGTAGAAGAGGTGG ACGAGGATTCGAA ]
[+] EMBL CD188074 [ CGGCACAGAAACCCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGAAGAGTACAAAGCTATGCGTCAGTCTTCCAAACCAGCCGTTTT ATTAAACAACAAAGGACTACGCAAAGCTAATGACGGCAAAGATGTGTTTGCAAATATGGTGGCTCACAGAAAAATACAAGAGGTCTCCGAAGATGTCTACGAGGTGGAGGAGAAGGAAAACGAGCCTGAGATTCCATCTAGGAGCATCAGTCGATCGATATTGATTTCTCTTTCGCTGACAACTTTGGAAACCGTAGAAGAGGTGG ACGAGGATTCGAAAGCAGAGGGTTCGATCGTGGGCGTGGTGTTGCACGCGGTGCAGGACCAAGAAGT ]
[-] EMBL CD184828 [ CGATCGATATTGATTTCTCTTTCGCTGACAACTTTGGAAACCGTAGAAGAGGTGG ACGAGGATTCGAAAGCAGAGGGTTCGATCGTGGGCGTGATGTTGCACGCGGTGCAGGACCAAGAAGTGAACGTGGGGGTCGAGGAAGAGGTCAGATAAGGAGTGACGGAAGAGGTCGTGGTTTCGGCCGTGTTTTGCCATTCAATTCAAATCGAGACTTCGAAAATCAGGATGGCCCAGATCGTCAGGGTCCAAGACAATATGGTCGAAGAGATGGGA]
consensusID : consensus_10839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 625 fasta sequence
[CGGTACCCCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACCTTCTCTCCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCCAACACATGACACATGAATATGCCTCGGTATGACGATAGCTACAATTAAATGCAAAATGACACAAAGGCGTATTCAAGAGTGGAACATAAAACCGGGGCGCGATACACAAGTGGAAACAGTCTGTTTTTGCCATTGTACAACAAATCAAATGTATCAATATTGTTCCATGCGAAGACATACACGTTTGGGAAACAAAGATTGAAGTTTAAATGGAAATGATATATTGCAATGATCTTTAAACATCCGCTACACCAGTTTCATCCTCGTCGAGATCCTGATCATCATCGTCATCTTCATCCTCTTCATCGTTTTCATTTTCTTCGTCTA]
[+] EMBL CD067803 [CGGTACCCCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAG ]
[+] EMBL CD067764 [CGGTACCCCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAG ]
[-] EMBL CD143251 [ TCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCT AGACCTTCTCTCCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGAC ]
[+] EMBL CD144217 [ GACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTACAAGCGCCTCAGAATCCAATTCGACTGGAGCCAACACATGACACATGAATATGCCTCGGTATGACGATAGCTACAATTAAATGCAAAATGACACAAAGGCGTATTCAAGAGTGGAACATAAAACCGGGGCGCGATACACAAGTGGAAACAGTCTGTTTTTGCCATTGTACAACAAATCAAATGTATCAATATTGTTCCATGCGAAGACATACACGTTTGGGAAACAAAGATTGAAGTTTAAATGGAAATGATATATTGCAATGATCTTTAAACATCCGCTACACCAGTTTCATCCTCGTCGAGATCCTGATCATCATCGTCATCTTCATCCTCTTCATCGTTTTCATTTTCTTCGTCTA]
consensusID : consensus_10839#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 546 fasta sequence
[TCCCGCTTTTTTGCCACTCTTTATTTGTTTGATGGCCATGCTGATCTCTTCAATTGTTGGTGGGCCAACGTCGATTGGTAGGTCCGTGGTTGCTGCTTCGATGTTGGGTGGGTTCAGTGGAGCTGGTCGATTCGAGAGTTCCTTAAAGTGCTCTACCCACATCTTTCGCTGTTCTTCAATGTTGGTGGTTACTTTGCCTTCCTTGCTTTTCACTGGTCATTCTGATTTACGGTAGTTTCCAGCGAGTTTCTTTGTTGTATCATACAATTATCTCATGTTTCCTTCTCTCGCAGACCTTTCCGCATATTTACATTTGTTGGTTCTGATGCTCCTCTTCACTTGCTTGTTTACTTCTGTGTATTCGGCCTGTGCCTTGGCTTTTTCTCTTCTTGTTTGGCTGATATTGATTGCTACCTTCTTGTTCCTCCTTTCTTATCTATCTCACCTATCTTATCCAGTGTATCAACATTGATCCATTCCTTGTGATGGTGCTTCTTGTGGGCCACAACCTCCTGTCAAGTCGAAGTGATTTCCTCTTGATCCCTT]
[+] EMBL CD093137 [TCCCGCTTTTTTGCCACTCTTTATTTGTTTGATGGCCATGCTGATCTCTTCAATTGTTGGTGGGCCAACGTCGATTGGTAGGTCCGTGGTTGCTGCTTCGATGTTGGGTGGGTTCAGTGGAGCTGGTCGATTCGAGAGTTCCTTAAAGTGCTCTACCCACATCTTTCGCTGTTCTTCAATGTTGGTGGTTACTTTGCCTTCCTTGCTTTTCACTGGTCATTCTGATTTACGGTAGTTTCCAGCGAGTTTCTTTGTTGTATCATACAATTATCTCATGTTTCCTTCTCTCGCAGACCTTTCCGCATATTTACATTTGTTGGTTCTGATGCTCCTCTTCACTTGCTTGTTTACTTCTGTGTATTCGGCCTGTGCCTTGGCTTTTTCTCTTCTTGTTTGGCTGATATTGATTGCTACCTTCTTGTTCCTCCTTTCTTATCTATCT ]
[+] EMBL CD089707 [ TCAAGAGTTCCTTAAAGTGCTCTACCCACATCTTTCGCTGTTCTTCAATGTTGGTGGTTACTTTGCCTTCCTTGCTTTTCACTGGTCGTTCTGATTTACGGTAGTTTCCAGCGAGTTTCTTTGTTGTATCATACAATTATCTCATGTTTCCTTCTCTCGCAGACCTTTCCGCATATTTACATTTGTTGGTTCTGATGCTCCTCTTCACTTGCTTGTTTACTTCTGTGTATTCGGCCTGTGCCTTGGCTTTTTCTCTTCTTGTTTGGCTGATATTGATTGCTACCTTCTTGTTCCTCCTTTCTTATCTATCTCACCTATCTTATCCAGTGTATCAACATTGATCCATTCCTTGTGATGGTGCTTCTTGTGGGCCACAACCTCCTGTCAAGTCGAAGTGATTTCCTCTTGATCCCTT]
consensusID : consensus_10839#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 387 fasta sequence
[GTTGNAATCGGAATAGCGGTAAGTGTTGTTTATCGATAGTTGATGTGATGTGATGTGATGTGATTGGTGTTGTGAGTAGTGTTGCTTTATGTGTGATGATGTTTTGTGCATGATGTATGTTGTTGTTGTTGTTGTGTAAATCTGTTTGTAATTCGGTAAGCGAGACGTAATTTGGTGATGATAACTTGCCCTCTACGATCAGTGATTGGGCTCTATCTGAGATAGTATTGATGAAATGTATACATGTGTGCATGTATGTGTATGTGTACCATTGTATATGTAGGTTTAGTGTCTATTGATGTGATGTTAATTGAGAAATTGATATGTTGTTTTG-TTTTTTCTTCAGTAAATAATAGTTGTGTAATGGTGGCGACTGACTGGACGAAG]
[-] EMBL CD140994 [GTTGNAATCGGAATAGCGGTAAGTGTTGTTTATCGATAGTTGATGTGATGTGATGTGATGTGATTGGTGTTGTGAGTAGTGTTGCTTTATGTGTGATGATGTTTTGTGCATGATGTATGTTGTTGTTGTTGTTGTGTAAATCTGTTTGTAATTCGGTAAGCGAGACGTAATTTGGTGATGATAACTTGCCCTCTACGATCAGTGATTGGGCTCTATCTGAGATAGTATTGATGAAATGTATACATGTGTGCATGTATGTGTATGTGTACCATTGTATATGTAGGTTTAGTGTCTATTGATGTGATGTTAATTGAGAAATTGATATGTTGTTTTG TTTTTTCTTCAGTAAATAATAGTTGTGTAATGGTGG ]
[+] EMBL CD115417 [ TTGTTGTTGTTGTGTAAATCTGTTTGTAATTCGGTAAGCGAGACGTAATTTGGTGATGATAACTTGCCCTCTATGATCAGTGATTGGGCTCTATCTGAGATAGTATTGATTATTTGTATAAATGTGTGCATGTATGTGTATGTGTACCATTGTATATGTAGGTTTAGTGTCTATTGATGTGATGTTAATTGAGAAATTGATATGTTGTTTTGTTTTTTTCTTCAGTAAATAATAGTTGTGTAATGGTGGCGACTGACTGGACGAAG]
consensusID : consensus_10839#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 339 fasta sequence
[ACTTCACATATTCCGCTCATCTCACCGGAACGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATTTGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAACCGGGACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTAT]
[+] EMBL CD065613 [ACTTCACATATTCCGCTCATCTCACCGGAACGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATTTGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGT ]
[-] EMBL CD067741 [ GGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAACCGGGACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTAT]
consensusID : consensus_10839#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 324 fasta sequence
[GCTCGGTACCCTGCACTTCACCGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCATAGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGA]
[+] EMBL CD168542 [GCTCGGTACCCTGCACTTCACCGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCATAGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGA]
consensusID : consensus_10839#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 226 fasta sequence
[GCACGGTACCCTGCAATCACCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTTACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACACTGTGGTGACATAATTTCCGGGGAGATCTGGCAGCCTGACT]
[+] EMBL CD168552 [GCACGGTACCCTGCAATCACCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTTACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTC ]
[+] EMBL CD168572 [GCTCGGTACCCTGCAATCACCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTTACCAACTTCGCCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTC ]
[+] EMBL CD168594 [ CGGTACCCTGCAATCACCGACTGCCCACTCGGCTTCCGTCT ACCTTCAAATACGCCTTCTCCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACACTGTGGTGACATAATTTCCGGGGAGATCTGGCAGCCTGACT]
consensusID : consensus_10839#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 217 fasta sequence
[CAGCCATCACACAAATCGAATGAGATTTGTGAGGCGCATATTTATCTGGTGCTTCCTTGTACCAATATTTGTGTGTTTAAATAAAAAAAAATAAAGGGAACATAGCGGGTGACATTTCAACACGTCGACTCAAGAGATCTGTTGAAAGGACGTTTCTCGCCGCCAAGTTACATATAATTTTCTCGGCTTAACCAAGAGCGTCTGACAGGNAGGTGGA]
[+] EMBL CD132615 [CAGCCATCACACAAATCGAATGAGATTTGTGAGGCGCATATTTATCTGGTGCTTCCTTGTACCAATATTTGTGTGTTTAAATAAAAAAAAATAAAGGGAACATAGCGGGTGACATTTCAACACGTCGACTCAAGAGATCTGTTGAAAGGACGTTTCTCGCCGCCAAGTTACATATAATTTTCTCGGCTTAACCAAGAGCGTCTGACAGGNAGGTGGA]
consensusID : consensus_10839#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 135 fasta sequence
[TTGAAGTTTAAATGGAAATGATATATTGCAATGATCTTTAAACATCCGCTACACCAGTTTCATCCTCGTCGAGATCCTGATCATCATCGTCATCTTCATCCTCTTCATCGTTTTCTTAAACTTAATTATAACCTC]
[+] EMBL CD185961 [TTGAAGTTTAAATGGAAATGATATATTGCAATGATCTTTAAACATCCGCTACACCAGTTTCATCCTCGTCGAGATCCTGATCATCATCGTCATCTTCATCCTCTTCATCGTTTTCTTAAACTTAATTATAACCTC]
consensusID : consensus_10839#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 101 fasta sequence
[GTCGCGTAACTAGTTAGCATGCCAAAGTCTCGTTCGGTATCGGAATTAACCAGACGAATCCCTTCACCAGCTAAGAACCCCCGTGCATCACAATACCGTAT]
[+] EMBL BG930164 [GTCGCGTAACTAGTTAGCATGCCAAAGTCTCGTTCGGTATCGGAATTAACCAGACGAATCCCTTCACCAGCTAAGAACCCCCGTGCATCACAATACCGTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 ------------------------------------------------------------
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 ------------------------------------------------------------
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 TGACTGGGGATAACCTAGCGGCTCAGGAATGCGTGTAGGTAGAGGGCAGGGGCCACGAAT 60
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 ------------------------------------------------------------
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 ------------------------------------------------------------
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 AGCTCCGACAGAAGCACCTCAAGATTCAGTGAGTGATTTGAATGCTCCCAGAGGGTCAAG 120
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 ------------------------------------------------------------
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 ------------------------------------------------------------
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 CTTTGAGCCTAGAGGACGTGGGAGAGGCAGAGGAAGAGGAATGTTTGGTCGAGGTCGTGG 180
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 ------------------------------------------------------------
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 ------------------------------------------------------------
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 GATGCCATTCAATTCAAATCGAGACTTCGAAAATCAGGATGGCCCAGATCGTCAGGGTCC 240
consensus_10839#4 ------------------------------------ACTTCACATATTCCGCT-CATCTC 23
consensus_10839#5 ---------------------------GCTCGGTACCCTGCACTTCACCGACTGCAGCAC 33
consensus_10839#1 -CGGTACCCCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTC 59
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ---------------------------------------------------GCACGGTAC 9
consensus_10839#9 --------------------------------------------------GTCGCGTAAC 10
consensus_10839#2 -------------------------------------------TCCCGCTTTTTTGCCAC 17
consensus_10839#7 -----------------------------------------------------CAGCCAT 7
consensus_10839#3 ----------------------------------------------GTTGNAATCGGAAT 14
consensus_10839#0 AAGACAATATGGTCGAAGAGATGGGAATTGGAATTCTCAGGATGTTGATGGTCTAATAAT 300
consensus_10839#4 -A-CCGGAACGG-AACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATTTGGTGAA 80
consensus_10839#5 -AACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAA 92
consensus_10839#1 -ACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAA 118
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 -CCTGCAATCACCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTTACCAA 68
consensus_10839#9 TAGTTAGCATGCCAAAGTCTCGTTCGGTATCGGAATTAACCAGACGAATCCCTTCACCAG 70
consensus_10839#2 TCTTTATTTGTTTGATGGCCATGCTGATCTCTTCAATTGTTGGTGGGCCAACGTCGATTG 77
consensus_10839#7 CACACAAATCGAATGAGATTTGTGAGGCGCATAT-TTATCTGGTGCTTCCTTGTACCAAT 66
consensus_10839#3 AGCGGTAAGTGTTGTTTATCGATAGTTGATGTGATGTGATGTGATGTGATTGGTGTTGTG 74
consensus_10839#0 GCCTGAGAGTGGTGACTCAGAGCAAGTTGTGCGTTTCGCAGACGACCGTAACGAAGTCGA 360
consensus_10839#4 GTTGGTGAAG-------GCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGT 133
consensus_10839#5 GTTGGTGAAG-------GCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGT 145
consensus_10839#1 CTTCACCATA-------TTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGT 171
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 CTTCACCATA-------TTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGT 121
consensus_10839#9 CTAAGAACCC-------CCGTGCATCACAATACCGTAT---------------------- 101
consensus_10839#2 GTAGGTCCGTGG----TTGCTGCTTCGATGTTGGGTGGGTTCAGTGGAGCTGGTCGATTC 133
consensus_10839#7 ATTTGTGTGTT-----TAAATAAAAAAAAATAAAGGGAACATAGCGGGTGACATTTCAAC 121
consensus_10839#3 AGTAGTGTTGC-----TTTATGTGTGATGATGTTTTGTGCATGATGTATGTTGTTGTTGT 129
consensus_10839#0 GGACCAGCCAGAGCATGCCACAGCTGAGAATGAGGAGGGTGTGGTTGTCGGCACAGAAAC 420
consensus_10839#4 GTTCGG-TGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGTGAAGTGGTAGAACAGG 192
consensus_10839#5 G--------------------------------------------AAGTGGTAGAACAGG 161
consensus_10839#1 TCCGGT-TGTG-------------CTGCAGTCTCTGCAAGCGCCTCAGACCTTCTCTCCA 217
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 TCCGGT-TGTG-------------CTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGA 167
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 GAGAGT-TCCTTAAAGTGCTCTACCCACATCTTTCGCTGTTCTTCAATGTTGGTGGTTAC 192
consensus_10839#7 AC---------------------------GTCGACTCAAGAGATCTGTTGAAAGGACGTT 154
consensus_10839#3 TGTTGTGTAAATCTGTTTGTAATTCGGTAAGCGAGACGTAATTTGGTGATGATAACTTGC 189
consensus_10839#0 CCCAGTTGAGGAAGAACCGAAAAGCTACACACTAGA-AGAATACAAAGCTATGCGTCAGT 479
consensus_10839#4 TTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAG 252
consensus_10839#5 TTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAT 221
consensus_10839#1 CCGACACGCTCAACCAATCGTTCCC-GTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTC 276
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 CTGGAGCGAACACAGACACTGTGGT-GACATAATTTCCGGGGAGATCTGGCAGCCTGACT 226
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 TTTGCCTTCCTTGCTTTTCACTGGTCATTCTGATTTACGGTAGTTTCCAGCGAGTTTCTT 252
consensus_10839#7 TCTCGCCGCCAAGTTACATATAATTTTCTCGGCTTAACCAAGAGCGTCTGACAGGNAGGT 214
consensus_10839#3 CCTCTACGATCAGTGATTGGGCTCTATCTGAGATAGTATTGATGAAATGTATACATGTGT 249
consensus_10839#0 CTTCCAAACCAGCCGTTTTATTAAACAACAAAGGACTACGCAAAGCTAATGACGGCAAAG 539
consensus_10839#4 AGACTGCAGCACAACCGGGACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGA-GGCG 311
consensus_10839#5 AGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGA-GGCG 280
consensus_10839#1 AGACTCCAATTCGACTGGAGCCAACAC-ATGACACATGAATATGCCTCGGTATGA-CGAT 334
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 TGTTGTATCATACAATTATCTCATGTTTCCTTCTCTCGCAGACCTTTCCGCATAT-TTAC 311
consensus_10839#7 GGA--------------------------------------------------------- 217
consensus_10839#3 GCATGTATGTGTATGTGTACCATTGTATATGTAGGTTTAGTGTCTATTGATGTGA-TGTT 308
consensus_10839#0 ATGTGTTTGCAAACATGGTGGCTCACAGAAAAATACAAGAGGTCTCCGAAGATGTCTACG 599
consensus_10839#4 GAATATGGTGAAGTTGGTGAAGGCGTAT-------------------------------- 339
consensus_10839#5 GAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGA---------------- 324
consensus_10839#1 AGCTACAATTAAATGCAAAATGACACAAAGGCGTATTCAAGAGTGGAACATAAAACCGGG 394
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 ATTTGTTGGTTCTGATGCTCCTCTTCACTTGCTTGTTTACTTCTG-----TGTATTCGGC 366
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 AATTG-AGAAATTGATATGTTGTTTTGTTTTTTCTTCAGTAAATAATAGTTGTGTAATGG 367
consensus_10839#0 AGGTGGAGGAGAAGGAAAACGAGCCTGAGATTCCATCTAGGAGCATCAGTCGATCGATAT 659
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 GCGCGATACACAAGTGGAAACAGTCTGTTTTTGCCATTGTACAACAAATCAAATGTATCA 454
consensus_10839#8 ------------------------------------------------------------
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 CTGTGCCTTGGCTTTTTCTCTTCTTGTTTGGCTGATATTGATTGCTACCTTCTTGTTCCT 426
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 TGGCGACTGACTGGACGAAG---------------------------------------- 387
consensus_10839#0 TGATTTCTCTTTCGCTGACAACTTTGGAAACCGTAGAAGAGGTGGACGAGGATTCGAAAG 719
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 ATATTGTTCCATGCGAAGACATACACGTTTGGGAAACAAAGATTGAAGTTTAAATGGAAA 514
consensus_10839#8 ------------------------------------------TTGAAGTTTAAATGGAAA 18
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 CCTTTCTTATCTATCTCACCTATCTTATCCAGTGTATCAACATTGATCCATTCCTTGTGA 486
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 CAGAGGGTTCGATCGTGGGCGTGGTGTTGCACGCGGTGCAGGACCAAGAAGTGAACGTGG 779
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 TGATATATTGCAATGATCTTTAAACATCCGCTACACCAGTTTCATCCTCGTCGAGATCCT 574
consensus_10839#8 TGATATATTGCAATGATCTTTAAACATCCGCTACACCAGTTTCATCCTCGTCGAGATCCT 78
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 TGGTGCTTCTTGTGGGCCACAACCTCCTGTCAAGTCGAAGTGATTTCCTCTTGATCCCTT 546
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 GGGTCGAGGAAGAGGTCAGATAAGGAGTGACGGAAGAGGTCGTGGTTTCGGCCGTGTTTT 839
consensus_10839#4 ------------------------------------------------------------
consensus_10839#5 ------------------------------------------------------------
consensus_10839#1 GATCATCATCGTCATCTTCATCCTCTTCATCGTTTTCATTTTCTTCGTC-TA-------- 625
consensus_10839#8 GATCATCATCGTCATCTTCATCCTCTTCATCGTTTTCTTAAACTTAATTATAACCTC--- 135
consensus_10839#6 ------------------------------------------------------------
consensus_10839#9 ------------------------------------------------------------
consensus_10839#2 ------------------------------------------------------------
consensus_10839#7 ------------------------------------------------------------
consensus_10839#3 ------------------------------------------------------------
consensus_10839#0 GCCATTCAATTCAAATCGAGACTTCGAAAATCAGGATGGCCCAGATCGTCAGGGTCCAAG 899
consensus_10839#4 -----------------------
consensus_10839#5 -----------------------
consensus_10839#1 -----------------------
consensus_10839#8 -----------------------
consensus_10839#6 -----------------------
consensus_10839#9 -----------------------
consensus_10839#2 -----------------------
consensus_10839#7 -----------------------
consensus_10839#3 -----------------------
consensus_10839#0 ACAATATGGTCGAAGAGATGGGA 922
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||