These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10859#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1321 fasta sequence [GGGCCTTCCAAGTTTGGCGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTGCTGTATGCAGTGAGCCGAAATCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAA-GTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT-AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC-AAATCCGTTTAC-TACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAA-GGATGTTGCTGATGATAAAGTTGATCCCATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAGAAAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATATTTCACTTGACTCCTTCATATCTCTCCATTTTTGCGATATATATATACACCAGATTCAGAATATAACAAAATCCCCTTGTCTAACACTGGTTACACATTCCTATTTTATAATAGATATTTCTGTAGCTAGAAAAACAAATTTTTTTTTCACCAAACTATTTCAGAATAATTGTTTCGATTTTTTTTATAAAATGTTGCCTGTAATTTGAATTATCAATAGATGCAT] [+] EMBL CD113463 [GGGCCTTCCAAGTTTGGCGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTGCTGTATGCAGTGAGCCGAAACCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCCATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAA GTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGACCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCG ] [+] EMBL CD113391 [GGGCCTTCCAAGTTTGGCGGAGTGGACACCATCTGATGGACTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGTACGATAAACAAAATATTGCTGTATGCAGTGAGCCGAAATCATAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCGAATATTTTAAAAGACCAGTACCTTCTAAATTTACTCAA GTCATCAAAAGATGGATGGGTGGATCTCTCAATAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCCTCAACTAAAATTGAGGTGT ] [+] EMBL CD151852 [GGGCCTTCCAAGTTTGGCGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTACTGTATGCAGTGAGCCGAAATCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAA GTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCG ] [+] EMBL CD185755 [ CGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTACTGTATGCAGTGAGCCGAAATCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAA GTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATCATAT ] [+] EMBL BG932702 [ GACGCAAATATTGTAAAAGATCAATACCTTCTAAATTTAGTCAATGTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTTAAAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGACAAAATCCGTTTAC TACCGTACCATCATATTGTCGGAATTC ] [-] EMBL BG932649 [ ACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAA GTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATC ] [-] EMBL BG932728 [ ACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAA GTCATCAAAAGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATC ] [-] EMBL CD151790 [ AGATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAATAACTCCAGTCTTCGACGACGGATGTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTATAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACATGGGAC AAATCCGTTTAC TACCGAACCATCATATTGTCGGAATTCCCAGAGAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTATAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATGTGATATTAAACGTTCACAAATACTACATAGTCAACTCGG ] [+] EMBL CD163821 [ ATGGATGGGTGGATCTCTCAGTAATTGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCG TTACTTACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAgtcg ] [+] EMBL CD068350 [ gtGAT GGTGGATCTCTCAGTAA TGCAAGTTTT AAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCAT ] [-] EMBL CD157324 [ GAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGAC AAATCCGTTTAC TACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACC ] [+] EMBL CD078606 [ AGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAA GGATGTTGCTGATGATAAAGTTGATCCCATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGTAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAGAAAAC ACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATAT ] [+] EMBL AI977411 [ CGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAA GGATGTTGCTGATGATAAAGTTGATCCCATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGATTAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAGAAAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATATTTCACTTGACTCCTTCATATCTCTCCATTTTTGCGATATATATATACACCAGATTCAGAATATAACATAATCCCCT ] [+] EMBL CD178706 [ TGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAA GGATGTTGCTGATGATAAAGTTGATCCCATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAGAAAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATATT ] [+] EMBL CD178695 [ AAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAA GGATGTTGCTGATGATAAAGTTGATCCCATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAG AAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATATT ] [+] EMBL CD083470 [ CGAACATAAGACTGTCCCCAATACCACCAATCCCAAGGGATGTTGCTGATGATAAAGTTGATCCCATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATNATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAGAAAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATATTTCACTTGACTCCTTCATATCTCTCCATTTTTGCGATATATATATACACCAGATTCAGAATATAACAAAA ] [-] EMBL CD073070 [ TTGTTTTAGTAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAGAAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCGCCTCTTAGAAAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATGCATCCTTCATGATCATCTATATTTCACTTGACTCCTTCATATCTCTCCATTTTTGCGATATATATATACACCAGATTCAGAATATAACAAAATCCCCTTGTCTAACACTGGTTACACATTCCTATTTTATAATAGATATTTCTGTAGCTAGAAAAACAAATTTTTTTTTCACCAAACTATTTCAGAATAATTGTTTCGATTTTTTTTATAAAATGTTGCCTGTAATTTGAATTATCAATAGATGCAT] consensusID : consensus_10859#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 628 fasta sequence [TTGGCGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTGCTGTATGCAGTGAGCCGAAATCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAAGTCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTT-GTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAAGGATGTTGCTGATGATAAAGTTGATCC-CATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGA] [+] EMBL AI067169 [TTGGCGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTGCTGTATGCAGTGAGCCGAAATCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAAGTCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGGTGTCATGGCAATAAAAAACTAATTAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAAGGA ] [+] EMBL AI068212 [ GAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTGCTGTATGCAGTGAGCCGAAATCAGAGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAATTTAGTCAAGTCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTT GTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAAGGATGTTGCTGATGATAAAGTTGATCC CATTCGCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACGTACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTGAGTTACTCCGGCTACAGCGA] [+] EMBL BG930409 [ CCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTT GTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAATACCACCAATCCCAAGGATGTTGCTGATGATAAAGTTGACCCTCAATCcat ] consensusID : consensus_10859#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 401 fasta sequence [ATTCGACGCGTTGATCCTTTGCCCACTTGGGACAAATCCGTTTACTACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAGACCGGGCCGGCCCAATCACTAGGA] [-] EMBL CD200887 [ATTCGACGCGTTGATCCTTTGCCCACTTGGGACAAATCCGTTTACTACCGTACCATCATATTGTCGGAATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATTCCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAATCTATGCATACCTTTTGTGTCATGGCAATAAAAAACTAAATAAAAACCAACCCGAACATAAGACTGTCCCCAGACCGGGCCGGCCCAATCACTAGGA] [-] EMBL BG930156 [ AAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCGCGATGAATGGCCATCCTCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCTTAAACGTTCACAAATACAACATAGTCAACTCGGTGTCAAAATCTGTa ] consensusID : consensus_10859#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 222 fasta sequence [TTTAAGATCAGATGGTATCTTGCGGTTTGGAAACAGAACACGCACTAAAGATGGAGGATGGGTGGATCTCTCAGTAATTGCAAGTTTTAAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGACAAATCCGT] [-] EMBL CD114595 [TTTAAGATCAGATGGTATCTTGCGGTTTGGAAACAGAACACGCACTAAAGATGGAGGATGGGTGGATCTCTCAGTAATTGCAAGTTTTAAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTCAGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGTTGATCCTTTGCCCACTTGGGACAAATCCGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 GGGCCTTCCAAGTTTGGCGGAGTGGACACCATCTGATGGAGTTGGGTCCCAGTGGGTTTT 60 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 CTGATTGTCCGGTGCTGCAGGATAAAGAAAATATTGCTGTATGCAGTGAGCCGAAATCAG 120 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 AGCTTATGAATGAAAAGATTATCAAACAATGTGAATTCTATTTCTCGGACGCAAATATTT 180 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 TAAAAGACCAGTACCTTCTAAATTTAGTCAAGTCATCAAAAGATGGATGGGTGGATCTCT 240 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ----------------------------------------------TTGGCGGAGTGGAC 14 consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 CAGTAATTGCAAGTTTTAAAAAACTCCAGTCTTTGACGACGGATCTAAGCGTTATTCGTC 300 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ACCATCTGATGGAGTTGGGTCCCAGTGGGTTTTCTGATTGTCCGGTGCTGCAGGATAAAG 74 consensus_10859#2 -----------------------------------------------------ATTCGAC 7 consensus_10859#0 AGTCATTGACAGCATCAACTAAAATTGAGGTGTCAGAAGAT--GGGAATACA-ATTCGAC 357 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 AAAATATTGCTGTATGCAGTGAGCCGAAATCAGA--GCTTATGAATGAAAAGATTATCAA 132 consensus_10859#2 GCGTTGATCCTTTGCCCACTTGGGACAAATCCGTTTACTACCGTACCATCATATTGTCGG 67 consensus_10859#0 GCGTTGATCCTTTGCCCACTTGGGACAAATCCGTTTACTACCGTACCATCATATTGTCGG 417 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 A---CAATGTGAATTCTATTTCTCGGACGCAAATATTTTAAAAGACCAGTACCTTCTAAA 189 consensus_10859#2 AATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATG 127 consensus_10859#0 AATTCCCAGAAAATTCAAACGTCACAGTGGAAAGTATTCAGGAGTTCTTCACGATGAATG 477 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 TTTAGTCAAGTCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCT 249 consensus_10859#2 GCCATCC--TCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCT 185 consensus_10859#0 GCCATCC--TCCATCTTTAGTGCGTGTTCTGTTTCCAAACCGCAAGATACCATCTGATCT 535 consensus_10859#3 --------------------------------TTTAAGATCAGATGGTATCTTGCGGTTT 28 ** * * * * * ** * * * * * consensus_10859#1 TAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATT 309 consensus_10859#2 TAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATT 245 consensus_10859#0 TAAACGTTCACAAATACTACATAGTCAACTCGGTGTCAAAATCTGTGCTGTTGTTGAATT 595 consensus_10859#3 GGAAACAGAACACGCACTAAAGATGGAG---GATGGGTGGATCTCT-CAGTAATTGCAAG 84 ** *** **** * * * * ** **** * * ** *** * consensus_10859#1 CCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAAT 369 consensus_10859#2 CCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAAT 305 consensus_10859#0 CCCTAATCGACCTGATGCATTAAAAGCAATTAATTTATCTCGCTCTCACTGGGGGAAAAT 655 consensus_10859#3 TTTTAAAAAACTCCAGTCTTTGACGACGG-------ATCTAAGCGTTATTCGTCAGTCAT 137 *** ** * * ** * * **** * * * * ** consensus_10859#1 CTATGCATACCTTTTGTGTCATGGCAATAAAAAACTA-AATAAAAACCAACCCGAACATA 428 consensus_10859#2 CTATGCATACCTTTTGTGTCATGGCAATAAAAAACTA-AATAAAAACCAACCCGAACATA 364 consensus_10859#0 CTATGCATACCTTTTGTGTCATGGCAATAAAAAACTA-AATAAAAACCAACCCGAACATA 714 consensus_10859#3 TGACAGCATCAACTAAAATTGAGGTGTCAGAAGATGGGAATACAATTCGACGCGT---TG 194 * * * * ** * ** * **** ** * ** ** * consensus_10859#1 AGACTGTCCCCAATACCACCAATCCCAAGGATGTTGCTGATGATAAAGTTGATCCCATTC 488 consensus_10859#2 AGACTGTCCCCAGACCGGGCCGGCCCAATCACTAGGA----------------------- 401 consensus_10859#0 AGACTGTCCCCAATACCACCAATCCCAAGGATGTTGCTGATGATAAAGTTGATCCCATTC 774 consensus_10859#3 ATCCTTTGCCCACTTGGGACAAATCCGT-------------------------------- 222 * ** * **** * ** consensus_10859#1 GCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACG 548 consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 GCAAAACATTTCTACGTCGTCTGGATTGTTTTAGCAACAATAGTATTCATGTGTCTCACG 834 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 TACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTG 608 consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 TACGAGAGCCAATAGGTCCACCAACTGAAGAAAGTACTGGTTTTTCTCCTGGTTGGCGTG 894 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 AGTTACTCCGGCTACAGCGA---------------------------------------- 628 consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 AGTTACTCCGGCTACAGCGAATGCTGATTCGCGACGGAGCTAAAGTGAATAAGTCTTCAG 954 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 AAGCCGAACTTCAGCCATTAGATAATGCAATTGTTTGTATAGATTCCGGTGCAGTTTGCG 1014 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 CCTCTTAGAAAACAACCAGTCACATATAACAGAAGTATGTCAATCTTTCGGTGATAAATG 1074 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 CATCCTTCATGATCATCTATATTTCACTTGACTCCTTCATATCTCTCCATTTTTGCGATA 1134 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 TATATATACACCAGATTCAGAATATAACAAAATCCCCTTGTCTAACACTGGTTACACATT 1194 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 CCTATTTTATAATAGATATTTCTGTAGCTAGAAAAACAAATTTTTTTTTCACCAAACTAT 1254 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------------------------------------------------------------ consensus_10859#2 ------------------------------------------------------------ consensus_10859#0 TTCAGAATAATTGTTTCGATTTTTTTTATAAAATGTTGCCTGTAATTTGAATTATCAATA 1314 consensus_10859#3 ------------------------------------------------------------ consensus_10859#1 ------- consensus_10859#2 ------- consensus_10859#0 GATGCAT 1321 consensus_10859#3 ------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||