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Schistosoma mansoni
cluster # 10893 cluster # 10893       Sequences # 24       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10893#0 length = 1097 sequences # 4  
consensus_10893#1 length = 834 sequences # 4  
consensus_10893#2 length = 771 sequences # 5  
consensus_10893#3 length = 556 sequences # 6  
consensus_10893#4 length = 439 sequences # 1  
consensus_10893#5 length = 373 sequences # 3  
consensus_10893#6 length = 267 sequences # 1  

consensusID : consensus_10893#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1097
fasta sequence
                              [GGTTGATAGTTCTCATTATTGAAATAACCATAATGTTAATCAGTTACATAGATGCATATGAATGTANAATGAAGGATAGTTAAGATTAGTATCCAATTCATCAAAAATGTAATCAAAGTTTATCGTTCGACTAAGTAATAGAATAAGGATAAGATCTGATTTTCCAGGTTTAATAATAGTCAAAACGTGTTATAGCTTGAATGTAGTTGTTAGGAAACAGGTACTAGGTAAGGATGGCTAATCGATTGATGAAGTAATGAAACTTCATCAGTTGAGATGGTTAGGACACGTGCTACGTATACCCGACCACCGACTGCCCCAACGAGAGATGTTTTATGGTGTAGAGGAGTAGGTTGGAAGAAAGCTAAAGGTGGCCAGACCAAAACGTGGCTCACATACATGAAGCCATCGACAAGTGGTCTGAGCCACGCTGGTAGGTGTAGATTACCTGGTTGGGATCCGCGAGATGATAGCAATCGATGGTTAGAGACCTTGAATGACATGGCTCAAGATCGTTTGCAACAGCGAAGGTACATCCAGTCTTTGTGTTCTGCCAAAGTCTAATCTTCTAAATTCTACATGTCCCTATCCTTTTTCTCTTTCCAAATCTATTTCACTGTATTATACTCTAATCTTTCTATCTACTTATCAGCTACATTTGTTAAATATTTCATCATTCTACGTTATTTTGTTTCTCCTCTCAGAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGTGTTTTACCTATGGTGTGACCGATACTGTTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCCCCCGATTTTTTGTTTATTATTAGTAGTGCTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTG]

[-] EMBL CD146554             [GGTTGATAGTTCTCATTATTGAAATAACCATAATGTTAATCAGTTACATAGATGCATATGAATGTANAATGAAGGATAGTTAAGATTAGTATCCAATTCATCAAAAATGTAATCAAAGTTTATCGTTCGACTAAGTAATAGAATAAGGATAAGATCTGATTTTCCAGGTTTAATAATAGTCAAAACGTGTTATAGCTTGAATGTAGTTGTTAGGAAACAGGTACTAGGTAAGGATGGCTAATCGATTGATGAAGTAATGAAACTTCATCAGTTGAGATGGTTAGGACACGTGCTACGTATACCCGACCACCGACTGCCCCAACGAGAGATGTTTTATGGTGTAGAGGAGTAGGTTGGAAGAAAGCTAAAGGTGGCCAGACCAAAACGTGGCTCACATACATGAAGCCATCGACAAGTGGTCTGAGCCACGCTGGTAGGTGTAGATTACCTGGTTGGGATCCGCGAGATGATAGCAATCGATGGTTAGAGACCTTGAATGACATGGCTCAAGATCGTTTGCAACAGCGAAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD127789             [                                                                                                                                                                                                                                                                                                                                                                                                                                               aGGTAGGTGTAGACTACCTGGTTGGGATTCGCGAGATGATAGCAACCGATGGTTAGAGACCTTGAATGACATGGCTCAAAATCGTTTGCAATGGCGAAGGTGCATCCAGTCTTTGTGTTCTGCCAAAGTCTAATCTTCTAAATTCTACATGTCCCTATCCTTTTTCTCTTTCCAAATCTATTTCACTGTATTATACTCTAATCTTTCTATCTACTTATCAGCTACATTTGTTAAATATTTCATCATTCTACGTTATTTTGTTTCTCCTCTCAGAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGC                                                                                                                                                                                                                                                                                ]
[+] EMBL CD186427             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gtcgaAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATNGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGTGTTTTACCTATGGTGTGACCGATACTGTTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCCCCCGATTTTTTGTTTATTATTAGTAGTGCTACTACTGATGGATTCAATCAGT                    ]
[+] EMBL CD159319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAATTT      TACTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACC  AATTTT  ACTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTG]


>consensus_10893#0 GGTTGATAGTTCTCATTATTGAAATAACCATAATGTTAATCAGTTACATAGATGCATATG AATGTANAATGAAGGATAGTTAAGATTAGTATCCAATTCATCAAAAATGTAATCAAAGTT TATCGTTCGACTAAGTAATAGAATAAGGATAAGATCTGATTTTCCAGGTTTAATAATAGT CAAAACGTGTTATAGCTTGAATGTAGTTGTTAGGAAACAGGTACTAGGTAAGGATGGCTA ATCGATTGATGAAGTAATGAAACTTCATCAGTTGAGATGGTTAGGACACGTGCTACGTAT ACCCGACCACCGACTGCCCCAACGAGAGATGTTTTATGGTGTAGAGGAGTAGGTTGGAAG AAAGCTAAAGGTGGCCAGACCAAAACGTGGCTCACATACATGAAGCCATCGACAAGTGGT CTGAGCCACGCTGGTAGGTGTAGATTACCTGGTTGGGATCCGCGAGATGATAGCAATCGA TGGTTAGAGACCTTGAATGACATGGCTCAAGATCGTTTGCAACAGCGAAGGTACATCCAG TCTTTGTGTTCTGCCAAAGTCTAATCTTCTAAATTCTACATGTCCCTATCCTTTTTCTCT TTCCAAATCTATTTCACTGTATTATACTCTAATCTTTCTATCTACTTATCAGCTACATTT GTTAAATATTTCATCATTCTACGTTATTTTGTTTCTCCTCTCAGAATCTTCCCTCAATGT GGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGT GACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAA TTTTACTACTACTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTC CCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGTGTTTTAC CTATGGTGTGACCGATACTGTTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGC CACCCCCCGATTTTTTGTTTATTATTAGTAGTGCTACTACTGATGGATTCAATCAGTCGA AATCTTCCCTCAATGTG



consensusID : consensus_10893#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 834
fasta sequence
                              [AAAGCCACTTATTATGACAGTGATTATTGTTCTTCATCTTTACTAGAACTTTAACTTCAATCTTTCATGGCAGTAAAAACATAACACTGTTAAGATGTATGAGACTGTGAAGTTACTATACAATATGATTTTCCATGATTCTCTATTACGGGAACTATTGTTTAATTGTAAAGTCCTTTGTCCAATTCTAAACAAATTCATTTAAATGGTTTTATTATAAAAGACAATTTTTGTTACGTAAGTTTAATTTGCTTTTATAAATGTACTTACTTGCTTACTTACGCCAGTTACTCCCAACGAAGCACAGGCCTCCGACTAGCATTCTCCAACACACTCTGTCCTGGGTCTTCCTTTCTAGTTCTATCCAATTTTTGTTCATTCTTCTCATGTTTGTCTCCATTTCTCGACGTATTGTGTTCTTTGGTCTTCCTCTTCTCCTTCGGCCTTCAGGATTCCATGTGAGGGCTTGCCTTGTGACGCAGTTGGGTGATTTCCTCAATATGTGTCCTATCCACTTCCAGTGCTTCTTCCTGATTTCTTCCTCCACCGGATGGAATCTCGTTTGTCCTCTCCCACAGTAAGTTGTTGTTAGTATCTGGCCAACAGATCTGAAGTATTTTGAGTAAACAACTGTTAATAAACACCTGTATCTTCTGGATGATGGCCTTCTCAGTTCTCCACGTCTATGCGCCATACAGTAGGACTGTCTTGACATTTGTATTGAAAATTCTGATCTTGGTGTTGGTTGACAATTGTTTTGAGTTCCAGATGTTCTTCAGTTGTAAATATGCTGCTCTCGCTTTGCCGATCCGCGTCTTCATATCTTCATCAGAG]

[+] EMBL CD084483             [AAAGCCACTTATTATGACAGTGATTATTGTTCTTCATCTTTACTAGAACTTTAACTTCAATCTTTCATGGCAGTAAAAACATAACACTGTTAAGATGTATGAGACTGTGAAGTTACTATACAATATGATTTTCCATGATTCTCTATTACGGGAACTATTGTTTAATTGTAAAGTCCTTTGTCCAATTCTAAACAAATTCATTTAAATGGTTTTATTATAAAAGACAATTTTTGTTACGTAAGTTTAATTTGCTTTTATAAATGTACTTACTTGCTTACTTACGCCAGTTACTCCCAACGAAGCACAGGCCTCCGACTAGCATTCTCCAACACACTCTGTCCTGGGTCTTCCTTTCTAGTTCTATCCAATTTTTGTTCATTCTTCTCATGTTTGTCTCCATTTCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD190225             [                                                                                                                                                                                                                                                                                                                                                                 TCTAGTTCTATCCAATTGTTGTTCATTCTTCTCATGTCTGTCCCCATTTCTCAACGTATTGTGTTCTTTGGTCTTCCTCTTCTCCTTCGGCCTTCAGGATTCCATGTGAGGGCTTGCCTTGTGACGCAGTTGGGTGATTTCCTCAATATGTGTCCTATCCACTTCCAGTGCTTCTTCCTGATTTCTTCCTCCACCGGATGGAATCTCGTTTGTCCTCTCCCACAGTAAGTTGTTGTTAGTATCTGGCCAACAGATCTGAAGTATTTTGAGTAAACAACTGTTAATAAACACCTGTATCTTCTGGATGATGGCCT                                                                                                                                                                       ]
[+] EMBL CD068941             [                                                                                                                                                                                                                                                                                                                                                                                                                                 TCTTTGGTCTTCCTCTTCTGCTTCGGCCTTCAGGATTCCATGTGAGGGCTTGCCTTGTGACGCAGTTAACTGCTTTCCTCAATGTGTGTCCTATCCACTTCCAGTGCTTCTTCCcaat                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BG931145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCGAAGCATTTTGCGTAGACAACTGTTAATAAACACCTGTATCTTCTGGATGATGGCATTCTCAGTTCTCCACGTCTATGCGCCATACAGTAGGACTGTCTTGACATTTGTATTGAAAATTCTGATCTTGGTGTTGGTTGACAATTGTTTTGAGTTCCAGATGTTCTTCAGTTGTAAATATGCTGCTCTCGCTTTGCCGATCCGCGTCTTCATATCTTCATCAGAG]


>consensus_10893#1 AAAGCCACTTATTATGACAGTGATTATTGTTCTTCATCTTTACTAGAACTTTAACTTCAA TCTTTCATGGCAGTAAAAACATAACACTGTTAAGATGTATGAGACTGTGAAGTTACTATA CAATATGATTTTCCATGATTCTCTATTACGGGAACTATTGTTTAATTGTAAAGTCCTTTG TCCAATTCTAAACAAATTCATTTAAATGGTTTTATTATAAAAGACAATTTTTGTTACGTA AGTTTAATTTGCTTTTATAAATGTACTTACTTGCTTACTTACGCCAGTTACTCCCAACGA AGCACAGGCCTCCGACTAGCATTCTCCAACACACTCTGTCCTGGGTCTTCCTTTCTAGTT CTATCCAATTTTTGTTCATTCTTCTCATGTTTGTCTCCATTTCTCGACGTATTGTGTTCT TTGGTCTTCCTCTTCTCCTTCGGCCTTCAGGATTCCATGTGAGGGCTTGCCTTGTGACGC AGTTGGGTGATTTCCTCAATATGTGTCCTATCCACTTCCAGTGCTTCTTCCTGATTTCTT CCTCCACCGGATGGAATCTCGTTTGTCCTCTCCCACAGTAAGTTGTTGTTAGTATCTGGC CAACAGATCTGAAGTATTTTGAGTAAACAACTGTTAATAAACACCTGTATCTTCTGGATG ATGGCCTTCTCAGTTCTCCACGTCTATGCGCCATACAGTAGGACTGTCTTGACATTTGTA TTGAAAATTCTGATCTTGGTGTTGGTTGACAATTGTTTTGAGTTCCAGATGTTCTTCAGT TGTAAATATGCTGCTCTCGCTTTGCCGATCCGCGTCTTCATATCTTCATCAGAG



consensusID : consensus_10893#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 771
fasta sequence
                              [AAAGTTGGATAGAACTAGAAAAGAAGGCCCAGGACAGAGTGGGTTGGAGAATGCTGGTTGATGGCCTATGCCTCATTGTGAGTAACAGGCGTAATGCAATTTTCTACTAACTGGGATATCACAAAAGTATATTTGTTATTTACTTTTTACCTTTGTTAGGTCGGCCTCCAGAGAACTCCAACAGAGCCTCCAGAGGCTCAAAAAGAGCTCCAACCAATCAGAGCACGACAGAACATTCTGGAGTTCCAACGTGGCACGCTATCATTGGTCAGTAGCAATTTATGTCGTTAAGTGGATTGGCTGAATTAGGATGTTGATTTAACTTAA-GCAAACATCTATAAATACCTACGA-TTTTCTGTACAAAGATGAACC-TTGCAATAAAGCATCTTCTCCGTTACTCGTGTCTTCTCTCTGGTCTTCAAGTCGCTGAGTAGTGCTAGTCTTGGGGTTATCGGAATAGCTAGGATCCGAATAAGGCGTTCAACCTACGAGACATAACAAATTGGCGGCGGGGTTAGCTTATCAAGATGTCATTTACCTTTGAACAATTTGAAGCCTTGCTGGAGCGTCGAGAAAAACGATTTGAGCAGTTCCAGGTTCGTATCATAGAGACTTTAACGCAGAAATTGAACCTAAGTCAAACTGGTGCTACAGATGATGCTGCCAAGTCTAATGTCGACCACATTATTAATTCTATCCATGAATTCAATTTTGATGGTTCGTCAGGTATTACTTTCGAAACCTGGTTCAAGAAATATGAAGATTTATTCA]

[+] EMBL CD182474             [AAAGTTGGATAGAACTAGAAAAGAAGGCCCAGGACAGAGTGGGTTGGAGAATGCTGGTTGATGGCCTATGCCTCATTGTGAGTAACAGGCGTAATGCAATTTTCTACTAACTGGGATATCACAAAAGTATATTTGTTATTTACTTTTTACCTTTGTTAGGTCGGCCTCCAGAGAACTCCAACAGAGCCTCCAGAGGCTCAAAAAGAGCTCCAACCAATCAGAGCACGACAGAACATTCTGGAGTTCCAACGTGGCACGCTATCATTGGTCAGTAGCAATTTATGTCGTTAAGTGGATTGACTGAATTAGGATGTTGATTTAACTTAA GCAAACATCTATAAATACCTACGA TTNTCTGTACAAAGATGAACC TTGC ATANAGCATCTTCTn                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD182640             [AAAGTTGGATAGAACTAGAAAAGAAGGCCCAGGACAGAGTGGGTTGGAGAATGCTGGTTGATGGCCTATGCCTCATTGTGAGTAACAGGCGTAATGCAATTTTCTACTAACTGGGATATCACAAAAGTATATTTGTTATTTACTTTTTACCTTTGTTAGGTCGGCCTCCAGAGAACTCCAACAGAGCCTCCAGAGGCTCAAAAAGAGCTCCAACCAATCAGAGCACGACAGAACATTCTGGAGTTCCAACGTGGCACGCTATCATTGGTCAGTAGCAATTTATGTCGTTAAGTGGATTGACTGAATTAGGATGTTGATTTAACTTAANGC AACATCTATAANTACCTACGANTTTTCTGTAC AAGATGAACCTTTGC AT AAGCATCTTtc                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD085532             [                                                                                                                                                                                                                                                                                            TCCTTAAGCGGATTGGCTGAATTAGGATGTTGATTTAACTTAA GCAAACATCTATAAATACCTACGA TTTTCTGTACAAAGATGAACC TTGCACTAAAGCATCTTCTCCGTTACTCGTGTCTTCTCTCTGGTCTTCAAGTCGCTGAGTAGTGCTAGTCTTGGGGTTATCGGAATAGCTAGGATCCGAATAAGGCGTTCAACCTACGAGACATAACAAATTGGCGGCGGGGTTAGCTTATCAAGATGTCATTTACCTTTGAACAATTTGAAGCCTTGCTGGAGCGTCGAGAAAAACGATTTGAGCAGTTCCAGGTTCGTATCATAGAGACTTTAACGCAGAAATTGAACCTAAGTCAAACTGGTGCTACAGATGATGCTGCCAAGTCTAATGTCGACCACATTATTAATTCTATCCATGAATTCAATTTTGATGGTTCGTCAGGTATTACTTTCGAAACCTGGTTCAAGAAATATCAAGATTTATTCA]
[+] EMBL CD085599             [                                                                                                                                                                                                                                                                                            TCGTTAAGTGGATTGGCTGAATTAGGATGTTGATTTAACTTAA GCAAACATCTATAAATACCTACGA TTTTCTGTACAAAGATGAACC TTGCAATAAAGCATCTTCTCCGTTACTCGTGTCTTCTCTCTGGTCTTCAAGTCGCTGAGTAGTGCTAGTCTTGGGGTTATCGGAATAGCTAGGATCCGAATAAGGCGTTCAACCTACGAGACATAACAAATTGGCGGCGGGGTTAGCTTATCAAGACTTCATTTACCTTTGAACAATTTGAAGCCTTGCTGGAGCGTCGAGAAAAACGATTTGAGCAGTTCCAGGTTCGTATCATAGAGACTTCAACGCAGAAATTGAACCTAAGTCAAACTGGTGCTACAGATGATGCTGCCAAGTCTAATGTCGACCACATTATTAATTCTATCCATGAATTCAATTTTGATGGTTCGTCAGGTATTACTTTCGAAACCTGGTTCAAGAAATATGAAGATTTATTC ]
[+] EMBL CD085561             [                                                                                                                                                                                                                                                                                            TCGTTAAGTGGATTGGCTGAATTAGGATGTTGATTTAACTTAA GCAAACATCTATAAATACCTACGA TTTTCTGTACAAAGATGAACC TTGCAATAAAGCATCTTCTCCGTTACTCGTGTCTTCTCTCTGGTCTTCAAGTCGCTGAGTAGTGCTAGTCTTGGGGTTATCGGAATAGCTAGGATCCGAATAAGGCGTTCAACCTACGAGACATAACAAATTGGCGGCGGGGTTAGCTTATCAGGATGTCATTTGCCTTTGAACAATTTGAAGCCTTGCTGGAGCGTCGAGAAAAACGATTTGAGCAGTTCCAGGTTCGTATCATAGAGACTTTAACGCAGAAATTGAACCTAAGTCAAACTGGTGCTACAGATGATGCTGCCAAGTCTAATGTCGACCACATTATTAATTCTATCCATGAATTCAATTTTGATGGTTCGTCTGGTATTACTTTCGAAACCTGGTTCAAGAAATATGAAGATTTATTC ]


>consensus_10893#2 AAAGTTGGATAGAACTAGAAAAGAAGGCCCAGGACAGAGTGGGTTGGAGAATGCTGGTTG ATGGCCTATGCCTCATTGTGAGTAACAGGCGTAATGCAATTTTCTACTAACTGGGATATC ACAAAAGTATATTTGTTATTTACTTTTTACCTTTGTTAGGTCGGCCTCCAGAGAACTCCA ACAGAGCCTCCAGAGGCTCAAAAAGAGCTCCAACCAATCAGAGCACGACAGAACATTCTG GAGTTCCAACGTGGCACGCTATCATTGGTCAGTAGCAATTTATGTCGTTAAGTGGATTGG CTGAATTAGGATGTTGATTTAACTTAAGCAAACATCTATAAATACCTACGATTTTCTGTA CAAAGATGAACCTTGCAATAAAGCATCTTCTCCGTTACTCGTGTCTTCTCTCTGGTCTTC AAGTCGCTGAGTAGTGCTAGTCTTGGGGTTATCGGAATAGCTAGGATCCGAATAAGGCGT TCAACCTACGAGACATAACAAATTGGCGGCGGGGTTAGCTTATCAAGATGTCATTTACCT TTGAACAATTTGAAGCCTTGCTGGAGCGTCGAGAAAAACGATTTGAGCAGTTCCAGGTTC GTATCATAGAGACTTTAACGCAGAAATTGAACCTAAGTCAAACTGGTGCTACAGATGATG CTGCCAAGTCTAATGTCGACCACATTATTAATTCTATCCATGAATTCAATTTTGATGGTT CGTCAGGTATTACTTTCGAAACCTGGTTCAAGAAATATGAAGATTTATTCA



consensusID : consensus_10893#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 556
fasta sequence
                              [CACTTCGCGACAGACAGTCCATTG-AACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGG-AAAAGTCGCAATGCATCCCGTGGAATGACTGA-AGATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAAGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAAATAACCCTGG-GAAAATGCAGCGCTCACT-TCAGGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGAATATGGAGCGCGCGGTGATAGAAATGAATCAAATGGTTATAGAAGCAATGGGTTTGGGTCGTATCGTGGAAGAGGCAGGGGTCGCGACGGGCCCAGGGTTGGTGGTGATTTCTCAAGGAGATTTGAAGAACGCAATCCACGCGAAGT]

[+] EMBL CD157836             [CACTTCGCGACAGACAGTCCATTG AACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGG AAAAGTCGCAATGCATCCCGTGGAATGACTGA AGATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAGGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAAATAACCCTGG GAAAATGCAGCGCTCACT TCAGGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGA                                                                                                                                                   ]
[+] EMBL CD157891             [CACTTCGCGACAGACAGTCCATTG AACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGG AAAAGTCGCAATGCATCCCGTGGAATGACTGA AGATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAAGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAAATAACCCTGG GAAAATGCAGCGCTCACT TCAGGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGA                                                                                                                                                   ]
[+] EMBL CD157867             [ ACTTCGCGACAGACAGTCCATTG AACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGG AAAAGTCGCAATGCATCCCGTGGAATGACTGA ATATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAAGGCTGGTTATGGCTTCACTACTGGCTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAAATAACCCTGG GAAAATGCAGCGCTCACT TCAGGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGAATATGGAGCGCGCGGTGATAGAAATGAATCAAATGGTTATAGAAGCAATGGGTTTGGGTCGTATCGTGGAAGAGGCAGGGGTCGCGACGGGCCCAGGGTTGGTGGTGATTTCTCAAGGAGATTTGAAGAACGCAATCCACGCGAAGT]
[+] EMBL CD157827             [ ACTTCGCGACAAACAGTCCATTGNAACCGCTGTTTTTGAAGTCCTGCGAC AGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGGNAAAAGTCGCAATGCATCCCGTGGAATGACTGA TGATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAAGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCCTCAAACAGCAATTTCGAGAAATAACCCTGGNGAAAATGCAGCGCTCACTNTC GGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAGGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACNGAAGGCCGGTCAAGGGCAGGGCTCATGCTGCGGATCGTCCTTATGGGCGAAGCCCCCTGGA                                                                                                                                                   ]
[+] EMBL CD157863             [ cCTTCGCGACAGACAGTCCATTG AACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGG AAAAGTCGCAATGCATCCCGTGGAATGACTGATTTATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCATGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAAATAACCCTGG GAAAATGCAGCGCTCACT TCAGGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGA                                                                                                                                                   ]
[+] EMBL CD157895             [  CTTCGCGACAGACAGTCCATTG AACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGG AAAAGTCGCAATGCATCCCGTGGAATGACTGA TGATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAAGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAAATAACCCTGG GAAAATGCAGCGCTCACT TCAGGAAAATGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGA                                                                                                                                                   ]


>consensus_10893#3 CACTTCGCGACAGACAGTCCATTGAACCGCTGTTTTTGAAGTCCTGCGACAAGGGCTTCT TCGGGATATTTAGTTAGTTTAATATGAGCGACAGGAAAAGTCGCAATGCATCCCGTGGAA TGACTGAAGATAGGGTTAGAGGAGTAGTCAAATGGTTTAACGTCAAGGCTGGTTATGGCT TCATTACTCGTTCTGATACCTCTTCCGATATATTCGTGCATCAAACAGCAATTTCGAGAA ATAACCCTGGGAAAATGCAGCGCTCACTTCAGGAAAATGAAGAAGTCGAATTTTTCGTTG TTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTACTGGGCCTGACAGAAGGCCGGTAA AGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGGCGAAGCCCCAGGGAATATGGAGCGC GCGGTGATAGAAATGAATCAAATGGTTATAGAAGCAATGGGTTTGGGTCGTATCGTGGAA GAGGCAGGGGTCGCGACGGGCCCAGGGTTGGTGGTGATTTCTCAAGGAGATTTGAAGAAC GCAATCCACGCGAAGT



consensusID : consensus_10893#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [TTGTTTTGAGTTCCAGATGTTCTTCAGTTGTAAATATGCTGCTCTTGCTTTGCCAATCCACGCCTTCACATCTGCATCAGATCTACTGTGTTCATCAATGATGCTACCCAGATATGTAAAGGTTTTCACATCCTCCGAACCTTCTCCATCAAGTGTAATTCGATTGATGCATGTTGTGTTGTGTCGGAGGATCTTGGTTTTCCTTTTTTTATATTGAGACCTACTGCTGCTGAGGCTAATACTACACCGGTCGTCTTCTCCTGCATTTGTTGTTGCGTGTGAGATAGAAGAGCCAGATCATCCGCGGAGTCTAAATCATCCAGCTCGATCCTAGCTGTCCATTGTATCCCGTGCTTCCACAGCCTCAGATGTTGACGTCTTCATAATCCAGTCGATCACCAGGAGAAAGAGAAAGGGTGAGAGTAAGCAAACTTGGCTG]

[+] EMBL CD121466             [TTGTTTTGAGTTCCAGATGTTCTTCAGTTGTAAATATGCTGCTCTTGCTTTGCCAATCCACGCCTTCACATCTGCATCAGATCTACTGTGTTCATCAATGATGCTACCCAGATATGTAAAGGTTTTCACATCCTCCGAACCTTCTCCATCAAGTGTAATTCGATTGATGCATGTTGTGTTGTGTCGGAGGATCTTGGTTTTCCTTTTTTTATATTGAGACCTACTGCTGCTGAGGCTAATACTACACCGGTCGTCTTCTCCTGCATTTGTTGTTGCGTGTGAGATAGAAGAGCCAGATCATCCGCGGAGTCTAAATCATCCAGCTCGATCCTAGCTGTCCATTGTATCCCGTGCTTCCACAGCCTCAGATGTTGACGTCTTCATAATCCAGTCGATCACCAGGAGAAAGAGAAAGGGTGAGAGTAAGCAAACTTGGCTG]


>consensus_10893#4 TTGTTTTGAGTTCCAGATGTTCTTCAGTTGTAAATATGCTGCTCTTGCTTTGCCAATCCA CGCCTTCACATCTGCATCAGATCTACTGTGTTCATCAATGATGCTACCCAGATATGTAAA GGTTTTCACATCCTCCGAACCTTCTCCATCAAGTGTAATTCGATTGATGCATGTTGTGTT GTGTCGGAGGATCTTGGTTTTCCTTTTTTTATATTGAGACCTACTGCTGCTGAGGCTAAT ACTACACCGGTCGTCTTCTCCTGCATTTGTTGTTGCGTGTGAGATAGAAGAGCCAGATCA TCCGCGGAGTCTAAATCATCCAGCTCGATCCTAGCTGTCCATTGTATCCCGTGCTTCCAC AGCCTCAGATGTTGACGTCTTCATAATCCAGTCGATCACCAGGAGAAAGAGAAAGGGTGA GAGTAAGCAAACTTGGCTG



consensusID : consensus_10893#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 373
fasta sequence
                              [CAGGGTTTTACCTATG-GTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCA-GTGCCACCACCAATTTTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTACTGATGG-ATTCAATCAGTCGA-AATCTTCCCTCAATGTGGCAGTGAGTGCAA-CAACTCCCGTGGGTTCAACATTTAATCAGGGTTTTA]

[+] EMBL CD170808             [CAGGGTTTTACCTATG GTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCA GTGCCACCACCAATTTTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTCGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATAGTGGTCCTGATGTTTCTACTAATTCTAGTATTACTGGCAGTGCCAACACCAATTTTACTACTACTACTACTACTACTACTGGTGGTATTCAATCAGTCGAGAGTCTTCCCTCAATGTGGCAGTGAGTGCAA CAACTCCCGTGGGTTCAACATTTAATCAGGGTTTT ]
[-] EMBL CD170970             [ AGGGTTTTACCTATGTGTGTGACCGATACTGCTCCTGATGCTTCTACTCATTCTACTATTACGGCCACGTGCCACCACCCATTTTACTACTACTACTACTACTACTGATGGATTCAATCAGTCGAAATCGTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTACTGATGG ATTCAATCAGTCGA AATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAA TCCCGTTGGTTCAACATTTAATCAGGGTTTTA]
[-] EMBL CD159212             [                                                                                                      cgACTGATGGATTCAATCAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAATCAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTACTGATGG ATTCAATCAGTCGA AATCTTCCCTCAATGTGG                                                 ]


>consensus_10893#5 CAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATT ACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTGATGGATTCAATCAG TCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAAGCAATCCCGTTGGTTCAACATTTAAT CAGGGTTTTACCTATGGTGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATT ACTGCCAGTGCCACCACCAATTTTACTACTACTACTACTACTACTACTGATGGATTCAAT CAGTCGAAATCTTCCCTCAATGTGGCAGTGAGTGCAACAACTCCCGTGGGTTCAACATTT AATCAGGGTTTTA



consensusID : consensus_10893#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 267
fasta sequence
                              [TACCTGGGGCTGATGGTCTGGTATTGATTCGTATGTTGCGCGGCTGCCTCTCGAATCGACTGGGAAACAGTTACTTGTAACTTTTTATTTATTAATTGTGTAGTCGTTGGTGTGTGCTGAACGCTTCCTTCTTTCGTTGTCGTTGAAGGTAAACTAAAAGTTTGAGTTTCTTGCTGACGGCATAATACGTCGAATTGCGCGTTTGCATCCCGAATATTCACTACATGTTTATCTTTTATCACACATTGTATTTCAACATTTCTACAT]

[+] EMBL CD068066             [TACCTGGGGCTGATGGTCTGGTATTGATTCGTATGTTGCGCGGCTGCCTCTCGAATCGACTGGGAAACAGTTACTTGTAACTTTTTATTTATTAATTGTGTAGTCGTTGGTGTGTGCTGAACGCTTCCTTCTTTCGTTGTCGTTGAAGGTAAACTAAAAGTTTGAGTTTCTTGCTGACGGCATAATACGTCGAATTGCGCGTTTGCATCCCGAATATTCACTACATGTTTATCTTTTATCACACATTGTATTTCAACATTTCTACAT]


>consensus_10893#6 TACCTGGGGCTGATGGTCTGGTATTGATTCGTATGTTGCGCGGCTGCCTCTCGAATCGAC TGGGAAACAGTTACTTGTAACTTTTTATTTATTAATTGTGTAGTCGTTGGTGTGTGCTGA ACGCTTCCTTCTTTCGTTGTCGTTGAAGGTAAACTAAAAGTTTGAGTTTCTTGCTGACGG CATAATACGTCGAATTGCGCGTTTGCATCCCGAATATTCACTACATGTTTATCTTTTATC ACACATTGTATTTCAACATTTCTACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10893#0      GGTTGATAGTTCTCATTATTGAAATAACCATAATGTTAATCAGTTACATAGATGCATATG 60
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      ------------------------------------------------------------
consensus_10893#2      ------------------------------------------------------------
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      AATGTANAATGAAGGATAGTTAAGATTAGTATCCAATTCATCAAAAATGTAATCAAAGTT 120
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      ------------------------------------------------------------
consensus_10893#2      ------------------------------------------------------------
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      TATCGTTCGACTAAGTAATAGAATAAGGATAAGATCTGATTTTCCAGGTTTAATAATAGT 180
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      ------------------------------------------------------------
consensus_10893#2      ------------------------------------------------------------
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      CAAAACGTGTTATAGCTTGAATGTAGTTGTTAGGAAACAGGTACTAGGTAAGGATGGCTA 240
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      ------------------------------------------------------------
consensus_10893#2      ------------------------------------------------------------
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      ATCGATTGATGAAGTAATGAAACTTCATCAGTTGAGATGGTTAGGACACGTGCTACGTAT 300
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      ------------------------------------------------------------
consensus_10893#2      ------------------------------------------------------------
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      ACCCGACCACCGACTGCCCCAACGAGAGATGTTTTATGGTGTAGAGGAGTAGGTTGGAAG 360
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      -------------------------------------AAAGCCACTTATTATGACAGTGA 23
consensus_10893#2      ------------------------------------------------------------
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      AAAGCTAAAGGTGGCCAGACCAAAACGTGGCTCACATACATGAAGCCATCGACAAGTGGT 420
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      TTATTGTTCTTCATCTTTACTAGAACTTTAACTTCAATCTTTCATGGCAGTAAAAACATA 83
consensus_10893#2      --------------------------------------------AAAGTTGGATAGAACT 16
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      CTGAGCCACGCTGGTAGGTGTAGATTACCTGGTTGGGATCCGCGAGATGATAGCAATCGA 480
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      ACACTGTTAAGATGTATGAGACTGTGAAGTTACTATACAATATGATTTTCCATGATTCTC 143
consensus_10893#2      AGAAAAGAAGGCCCAGGACAGAGTGGGTTGGAGAATGCTGGTTGATGGCCTATGCCTCAT 76
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      TGGTTAGAGACCTTGAATGACATGGCTCAAGATCGTTTGCAACAGCGAAGGTACATCCAG 540
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      TATTACGGGAACTATTGTTTAATTGTAAAGTCCTTTGTCCAATTCTAAACAAATTCATTT 203
consensus_10893#2      TGTGAGTAACAGGCGTAATGCAATTTTCTACTAACTGGGATATCACAAAAGTATATTTGT 136
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      TCTTTGTGTTCTGCCAAAGTCTAATCTTCTAAATTCTACATGTCCCTATCCTTTTTCTCT 600
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      AAATGGTTTTATTATAAAAGACAAT-TTTTGTTACGTAAGTTTAATTTGCTTTTATAAAT 262
consensus_10893#2      TATTTACTTTTTACCTTTGTTAGGTCGGCCTCCAGAGAACTCCAACAGAGCCTCCAGAGG 196
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      ------------------------------------------------------------
                                                                                   

consensus_10893#0      TTCCAAATCTATTTCACTGTATTATACTCTAATCTTTCTATCTACTTATCAGCTACATTT 660
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      GTACTTACTTGCTTACTTACGCCAGTTACTCCCAACGAAGCACAGGCCTCCGACTAGCAT 322
consensus_10893#2      CTCAAAAAGAGCTCCAACCAATCAGAGCACGACAGAACATTCTGGAGTTCCAACGTGGCA 256
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      -----------------------CACTTCGCGACAGACAGTCCATTGAACCGCTGTTTTT 37
                                                                                   

consensus_10893#0      GTTAAATATTTCATCATTCTACGTTATTTTGTTTCTCCTCTCA-GAATCTTCCCTCAATG 719
consensus_10893#5      ------------------------------------------------------------
consensus_10893#4      ------------------------------------------------------------
consensus_10893#1      TCTCCAACACACTCTGTCCTGGGTCTTCCTTTCTAGTTCTATC-CAATTTTTGTTCATTC 381
consensus_10893#2      CGCTATCATTGGTCAGTAGCAATTTATGTCGTTAAGTGGATTGGCTGAATTAGGATGTTG 316
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      GAAGTCCTGCGACAAGGGCTTCTTCGGGATATTTAGTTAGTTTAATATGAGCGACAGGAA 97
                                                                                   

consensus_10893#0      TGGCAGTGAGTGCAAGCAATCCCGTTGG--TTCAACATTTAATCAGGGTTTTACCTATGG 777
consensus_10893#5      -------------------------------------------CAGGGTTTTACCTATGG 17
consensus_10893#4      ---------TTGTTTTGAGTTCCAGATG--TTCTTCAGTTG-TAAATATGCTGCTCTTGC 48
consensus_10893#1      TTCTCATGTTTGTCTCCATTTCTCGACG--TATTGT-GTTCTTTGGTCTTCCTCTTCTCC 438
consensus_10893#2      ATTTAACTTAAGCAAACATCTATAAATACCTACGATTTTCTGTACAAAGATGAACCTTGC 376
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      AAGTCGCAATGCATCCCGTGGAATGACTGAAGATAGGGTTAGAGGAGTAGTCAAATGGTT 157
                                                                                   

consensus_10893#0      TGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCA--GTGCCACC 835
consensus_10893#5      TGTGACCGATACTGCTCCTGATGTTTCTACTAATTCTACTATTACTGCCA--GTGCCACC 75
consensus_10893#4      TTTG-CCAATCCACGCCTTCACATCTGCATCAGATCTACTGTGTTCATCA--ATGATGCT 105
consensus_10893#1      TTCGGCC--TTCAGGATTCCATGTGAGGGCTTGCCTTGTGACGCAGTTGG--GTGATTTC 494
consensus_10893#2      AATAAAGCATCTTCTCCGTTACTCGTGTCTTCTCTCTGGTCTTCAAGTCG--CTGAGTAG 434
consensus_10893#6      ------------TACCTGGGGCTGATGGTCTGGTATTGATTCGTATGTTGC-GCGGCTGC 47
consensus_10893#3      TAACGTCAAGGCTGGTTATGGCTTCATTACTCGTTCTGATACCTCTTCCGATATATTCGT 217
                                                           *                       

consensus_10893#0      ACC-AATTTTAC---TACTACTACTACTACTACTACTACTACTGATGGATTCAATCAG-- 889
consensus_10893#5      ACC-AATTTTAC---TACTACTACTACTACTAC---------TGATGGATTCAATCAG-- 120
consensus_10893#4      ACCCAGATATGT---AAAGGTTTTCACATCCTC--------CGAACCTTCTCCATCAA-- 152
consensus_10893#1      CTCAATATGTGTCCTATCCACTTCCAGTGCTTCTTC--CTGATTTCTTCCTCCACCGG-- 550
consensus_10893#2      TGCTAGTCTTGG---GGTTATCGGAATAGCTAGGATC-CGAATAAGGCGTTCAACCTA-- 488
consensus_10893#6      CTCTCGAATCGACTGGGAAACAGTTACTTGTAA----------CTTTTTATTTATTAA-- 95
consensus_10893#3      GCATCAAACAGCAATTTCGAGAAATAACCCTGGGAAAATGCAGCGCTCACTTCAGGAAAA 277
                                                *                        *  *      

consensus_10893#0      TCGAAAT-CT---TCCCTCAATGTGGCAGTGAGTG--CAAGCAATCCCGTTGGTTCAACA 943
consensus_10893#5      TCGAAAT-CT---TCCCTCAATGTGGCAGTGAGTG--CAAGCAATCCCGTTGGTTCAACA 174
consensus_10893#4      GTGTAAT-TCGA-TTGATGCATGTTGTGTTGTGT---CGGAGGATCTTGGTTTTCCTTTT 207
consensus_10893#1      ATGGAATCTCGT-TTGTCCTCTCCCACAGTAAGTTGTTGTTAGTATCTGGCCAACAGATC 609
consensus_10893#2      -CGAGAC-ATAA-CAAATTGGCGGCGGGGTTAGCT--TATCAAGAT---GTCATTTACCT 540
consensus_10893#6      TTGTGTAGTCG--TTGGTGTGTGCTGAACGCTTCCTTCTTTCGTTGTCGTTGAAGGTAAA 153
consensus_10893#3      TGAAGAAGTCGAATTTTTCGTTGTTGAGGGAGACAAAGGCGTAGAGGCCTCCGATGTTAC 337
                                                                                   

consensus_10893#0      TT---TAATCAGTG--TTTTACCTATGGTGTG-ACCGATACTGTTCCTGATGT-TTCTAC 996
consensus_10893#5      TT---TAATCAGGG--TTTTACCTATGGTGTG-ACCGATACTGCTCCTGATGT-TTCTAC 227
consensus_10893#4      TT---TATATTGAG--ACCTACTGCTGCTGAG-GCTAATACTACACCGGTCGTCTTCTCC 261
consensus_10893#1      TGAAGTATTTTGAGTAAACAACTGTTAATAAACACCTGTATCTTCTGGATGATGGCCTTC 669
consensus_10893#2      TTGAACAATTTGAA-GCCTTGCTGGAGCGTCG-AGAAAAACGATTTGAGCAGTTCCAGGT 598
consensus_10893#6      CT-AAAAGTTTGAGTTTCTTGCTGACGGCATA-----ATACG--TCGAATTGC--GCGTT 203
consensus_10893#3      TGGGCCTGACAGAA--GGCCGGTAAAGGGTAGTGCTTATGCTGCGGATCGTCCTTATGGG 395
                                  *                                                

consensus_10893#0      TAATTCTACTAT---TAC----TGCCAG-TGCCACCCCCCGATTTTTTGTTTATTATTAG 1048
consensus_10893#5      TAATTCTACTAT---TAC----TGCCAG-TGCCACCACC-AATTTTAC---TACTACTAC 275
consensus_10893#4      TGCATTTGTTGT---TGCG---TGTGAGATAGAAGAGCCAGATCATCCGCGGAGTCTAAA 315
consensus_10893#1      TCAGTTCTCCACGTCTATG---CGCCATACAGTAGGACTGTCTTGACATTTGTATTGAAA 726
consensus_10893#2      TCGTATCATAGAGACTTTA---ACGCAGAAATTGAACCTAAGTCAAACTGGTGCTACAGA 655
consensus_10893#6      TGCATCCCGAA----TATT---CACTACATGTTTATCTTTTATCACACATTGTATTTCAA 256
consensus_10893#3      CGAAGCCCCAGGGAATATGGAGCGCGCGGTGATAGAAATGAATCAAATG-GTTATAGAAG 454
                                      *                          *           *     

consensus_10893#0      TAGTGCTACTA---CTGA-TGGATTCAATCAGTCGAAATCTTCC-----CTCA-ATGTG- 1097
consensus_10893#5      TACTACTACTA---CTGA-TGGATTCAATCAGTCGAAATCTTCC-----CTCA-ATGTGG 325
consensus_10893#4      TCATCCAGCTCGATCCTA-GCTGTCCATTGTATCCCGTGCTTCCACAGCCTCAGATGTTG 374
consensus_10893#1      ATTCTGATCTTGGTGTTG-GTTGACAATTGTTTTGAGTTCCAGATGTTCTTCAGTTGTAA 785
consensus_10893#2      TGATGCTGCCAAGTCTAATGTCGACCACATTATTAATTCTATCCATGAATTCAATTTTGA 715
consensus_10893#6      CATTTCTACAT------------------------------------------------- 267
consensus_10893#3      CAATGGGTTTGGGTCGTATCGTGGAAGAGGCAGGGGTCGCGACGGGCCCAGGGTTGGTGG 514
                                                                                   

consensus_10893#0      ------------------------------------------------------------
consensus_10893#5      CAGTGAGTGCAACAACTCCCGTGGGTTCAACATTTAATCAGGGTTTTA------------ 373
consensus_10893#4      ACGTCTTCATAATCCAGTCGATCACCAGGAGAAAGAGAAAGGGTGAGAGTAAGCAAACTT 434
consensus_10893#1      ATATGCTGCTCTCGCTTTGCCGATCCGCGTCTTCATATCTTCATCAGAG----------- 834
consensus_10893#2      TGGTTCGTCAGGTATTACTTTCGAAACCTGGTTCAAGAAATATGAAGATTTATTCA---- 771
consensus_10893#6      ------------------------------------------------------------
consensus_10893#3      TGATTTCTCAAGGAGATTTGAAGAACGCAATCCACGCGAAGT------------------ 556
                                                                                   

consensus_10893#0      -----
consensus_10893#5      -----
consensus_10893#4      GGCTG 439
consensus_10893#1      -----
consensus_10893#2      -----
consensus_10893#6      -----
consensus_10893#3      -----
                            




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)