These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10894#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 371 fasta sequence [TCAGGCA-ACTTCAAGTGAATATAATCATACTATTTAC-A-ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT-CAAGT-TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA-ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG-ATTAAGAGAAACTACGTT-GGTGGATCATCGGGACATTGAAAT-CCGGCAGCTAAAAGTGCC] [+] EMBL CD141418 [TCAGGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAGATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAGCTAAAAGTGCC] [+] EMBL CD141460 [TCAGGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAATCCCGGCA ] [+] EMBL CD141277 [TCAGGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGgc ] [+] EMBL CD141697 [TCAGGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAGAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGNGACATTGAAAT CCGGCA ] [+] EMBL CD141644 [TCAGGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAc ] [+] EMBL CD141576 [TCAGGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCA ] [+] EMBL CD141270 [TCAGGCA ACTTCAAGTGAATATAATCATGCTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGca ] [-] EMBL CD141535 [ CATGCA ACTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGNCCAAGCGCTACAAAAGAGAGGGAAAAATAAATAATCNAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACACTGAAAT CCGGCAG ] [-] EMBL CD141609 [ CAGGCA ACTTCAAGTGAATATAATCATACTA TTAC ATNNGTTAGANATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAGCTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAG GTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD141210 [ CAAGCA NCTTCAAGTGAATATAATCATACTA TTACAA ATGTTAGAAATATTAAATTGAAACAGCCCAAACGCTACAANAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD141480 [ AGGCANNCTTCAAGTGAATATAATCATACTATTANC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD141422 [ agcnna nCTTCAAGTGAATATAATCATACTATTTAC A ATGTTAGAAATATTAAATTGAAACAGACCAAACGCTACAAAAGAGAGGGAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACACTGAAAT CCGGCAG ] [-] EMBL CD141693 [ AGAGAGGGAAAAATACATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTCNGCCTAACAATGAGTTAGTTAACAAATAAATCTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAG GTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD141354 [ gaGGAAAAATAAAT ATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAGCTAAAAGTG ] [-] EMBL CD141366 [ GAAAAATAAATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD141306 [ ATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [+] EMBL CD141703 [ ATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAT ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATGAATTAAGAGAAACTACGTTGGGGGGATCATCGGGACATTGAAAT CCGGCA ] [+] EMBL CD141207 [ ATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCA ] [+] EMBL CD141622 [ ATAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCA ] [+] EMBL CD141242 [ tTAATTCTGAAATGAAAATCAGGAAAGCAAATAAGATGTAGATTACGATTTCGCCTAACAATGAGTTAGATAACAAATAAAACTATAGTGCAAGTGTAAAGTAATGTAAATATTTAATAGAGCAAACCAGAAGATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGAGATGCCAAAGTTTGAGTTCTGGTACTCACGGCGTAGATATATG ATTAAGAGAGACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCA ] [-] EMBL CD141217 [ TAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT AGTGGATTATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD141380 [ TAATTCAAAAATGAAAATCAGGTAAGCAAATAAGATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAACTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAa ] [-] EMBL CD141296 [ tcaaTCAAAAATGAAAGTCAGGTAAGCAAATAAGATGTAANTTGCGATTTCGCCTAACAATGAGTTAGTTAACAAATAGAACTCTAGT CAAGT TAAAGTAATGTAAATATCTAATAGAGTAAACCAGAA ATCAGTTCTCAGAAAAACAAAAAAGATCTACACATTTCCCGGTGATGCCAAAGTCTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTGCGTT GGTGGATCATCGGGACATTGAAAT CCGGCAG ] [-] EMBL CD116969 [ GATGTAAATTACGATTTCGCCTAACAATGAGTTAGTTAACAAATAAAATTATAGT CAAGT TAAAGTAATGTAAATATTTAATAGAGTAAACCAGAA ATCAATTTTCAGAAAAACAAAAAAGAACTACACATTTCACGGTGATGCCAAAGTTTGAGTTCTGGTACTCACGGTGTAGATATATG ATTAAGAGAAACTACGTT GGTGGATCATCGGGACATTGAAAT CCGGCAGCTAAAAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||