These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10932#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1807 fasta sequence [GTGGAATATTTGCCTACCTCAATTATCAAGTTCCAGTTACACGCCAAGTCATTATAAACACTTTGCTCAATGGCTTACATCGATTAGAATATCGTGGTTATGATTCTGCAGGACTAGCAGTAGACGCCGTTTGTCCGGAACAGGATGACTTATCTACTAATGATGGGTCTCACAAGACTTTTATTCGAGTTGTTCGTTGTAAAGGGAAAGTAGCATCATTGGGACAAGCTGTTAAAGAGTTTCTAACCGATCATGACTTTCCAAATGAACTAATCACAACACATGTTGGCATAGCGCATACTCGGTGGGCAACTCATGGTGAGCCAAATGAAGTAAATGCTCATCCCCAACGTTCTGGTCCTGACAACGGATTCGTTGTAGTGCACAATGGTATTATAACCAACCACATAGATCTAAGGGCATTACTGAGTCGTCGCGGTTATATATTCGAATCCGAAACAGATACAGAAGTGATTCCAAAATTTATGCAAATGATTTATGATTCACATAAAGAAAATCCCATTACCTTCTTAGAAGTTGTTGAATTGGTTGCTCAGCAACTGGAAGGATCGTTTGCATTAGCAACTAAAAGTTGTTACTACCCTGGTGAATGTGCTGTGGCCAGGCGGGGTTCACCAATGTTGGTTGGAATTAAAAGTCCGCATGAATTGACAATGAATCATATACCAGTGTTTTATAAACCGAATACTTCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGTTGAATTAGGAGATTCGTCAATGGAACAGGTGACACATTTTTTGAGTGGCGCAGATGGTCATCGAGAAATCGAGTTTTT-CTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGAAATTTTCGAACAACCAGAATCAGTGTTAAATACAATGAGAGGTCGAATAAAATTCGATATGAATACCGTGAAATTAGGTGGTCTTGCTGAACATCTAAGTGCAATACGTCGTTGCCGTCGACTCATATTTATTGGCTGTGGAACTAGTTATCATAGCGCAGTTGCAACACGTGCACTCATTGAAGAAATGTCTGAACTACCAGTTATGGTTGAATTAGCTAGTGATTTGTTAGATCGTAAAACCCCAATATTTCGTGATGATGTTTGTGTATTTATAAGTCAGTCGGGTGAAACAGCTGACACTTTGTTAGCTATGCGTTATTGTATCAAACGTGGAGCACTTGCTCTTGGTATCACAAACACTGTCGGTTCATCAATATCACGCGAATCACATTGTGGAGTGCATATCAATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACC-AAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATTGAT] [+] EMBL CD189561 [GTGGAATATTTGCCTACCTCAATTATCAAGTTCCAGTTACACGCCAAGTCATTATAAACACTTTGCTCAATGGCTTACATCGATTAGAATATCGTGGTTATGATTCTGCAGGACTAGCAGTAGACGCCGTTTGTCCGGAACAGGATGACTTATCTACTAATGATGGGTCTCACAAGACTTTTATTCGAGTTGTTCGTTGGAAAGGGAAAGTAGCATCATTGGGACAAGCTGTTA ] [-] EMBL CD061556 [ CAAGTTCCAGTTACACGCCAAGTCATTATAAACACTTTGCTCAATGGCTTACATCGATTAGAATATCGTGGTTATGATTCTGCAGGACTAGCAGTAGACGCCGTTTGTCCGGAACAGGATGACTTATCTACTAATGATGGGTCTCACAAGACTTTTATTCGAGTTGTTCGTTGTAAAGGGAAAGTAGCATCATTGGGACAAGCTGTTAAAGAGTTTCTAACCGATCATGAC TTCCAAATGAACTAATCACAACACATGTTGGCATAGCGCATACTCGGTGGGCAACTCATGGTGAGCCAAATGAAGTAAATGCTCATCCCCAACGTTCTGGTCCTGACAACGGATTCGTTGTAGTGCACAATGGTA TAT ACCAACC ] [+] EMBL CD113023 [ ATGATTCTGCAGGACTAGCAGTAGACGCCGTTTGTCCGGAACAGGATGACTTATCTACTAATGATGGGTCTCACAAGACTTTTATTCGAGTTGTTCGTTGTAAAGGGAAAGTAGCATCATTGGGACAAGCTGTTAAAGAGTTTCTAACCGATCATGACTTTCCAAATGAACTAATCACAACACATGTTGGCATAGCGCATACTCGGTGGGCAGCTCATGGTGAGCCAAATGAAGTAAATGCTCATCCCCAACGTTCTGGTCCTGACAACGGATTCGTTGTAGTGCACAATGGTATTATAACCAACCACATAGATCTAAGGGCATTACTGAGTCGTCGCGGTTATATATTCGAATCCGAAACAGATACAGAAGTGATTCCAAAATTTATGCAAATGATTTATGATTCACATAAAGAAAATCCCATTACCTTCTTAGAAGTTCTTGAATTGGTTGCTCAGCAACTGGAAGGATCGTTTGCATTAGCAACTAAAAGTTGTTACTACCCTGGTGAATGTGCTGTGGCCA ] [+] EMBL CD147608 [ AGAGTTTCTAACCGATCATGACTTTCCAAATGAACTAATCACAACACATGTTGGCATAGCGCATACTCGGTGGGCAACTCATGGTGAGCCAAATGAAGTAAATGCTCATCCCCAACGTTCTGGTCCTGACAACGGATTCGTTGTAGTGCACAATGGTATTATAACCAACCACATAGATCTAAGGGCATTACTGAGTCGTCGCGGTTATATATTCGAATCCGAAACAGATACAGAAGTGATTCCAAAATTTATGCAAATGATTTATGATTCACATAAAGAAAATCCCATTACCTTCTTAGAAGTTGTTGAATTGGTTGCTCAGCAACTGGAAGGATCGTTTGCATTAGCAACTAAAAGTTGTTACTACCCTGGT ] [+] EMBL CD162573 [ TAACCAACCACATAGATCTAAGGGCATTACTGAGTCGTCGCGGTTATATATTCGAATCCGAAACAGATACAGAAGTGATTCCAAAATTTATGCAAATGATTTATGATTCACATAAAGAAAATCCCATTACCTTCTTAGAAGTTGTTGAATTGGTTGCTCCGCAACTGGAAGGATCGTTTGCATTAGCAACTAAAAGTTGTTACTACCCTGGTGAATGTGTTGTGGCCAGGCGGGGTTCACCAATGTTGGTTGGAATTAAAAGTCCGCATGAATTGACAATGAATCATATACCAGTGTTTTATAAACCGAATACTTCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGTTGAATTAGGAGATTCGTCAATGGAACAGGTGACACATTTTTTGAGTGGCGCAGATGGTCATCGAGAAATCGAGTTTTT CTTCGCTAG ] [+] EMBL CD180194 [ cTGAGTTGACAATGAATCATATACCAGTGTTTTATAAACCGAATACTTCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGTTGAATTAGGAGATTCGTCAATGGAACAGGTGACACATTTTTTGAGCGGCGCAGATGGTCATCGAGAAATCGAGTTTTT CTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGA ] [+] EMBL CD180215 [ AATCATATACCAGTGTTTTATAAACCGAATACTTCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGTTGAATTAGGAGATTCGTCAATGGAACAGGTGACACATTTTTTGAGCGGCGCAGATGGTCATCGAGAAATCGAGTTTTT CTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGA ] [+] EMBL CD118877 [ TACACCAGTGTTTTATAAACCGACTACTCCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGCTGAATTAGGAGATTCGTCAATGGAACAGGAGACACATTTTTTGAGTGGCGCAGATGGCCATCCAGAAATCGAGTTTTTCCTTCGC ] [+] EMBL CD118886 [ TATACCAGTGTTTTATAAACCGAATACTTCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGTTGCATTAGGAGATTCGTCAATGGAACAGGTGACACATTTTTTGAGTGGCGCAGATGGTCATCGAGAAATCGAGTTTTT CTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGAAATTTTCGAACAACCAGAATCAGTGTTAAATACAATGAGAGGTCGAATAAAATTCGATATGAATACCGTGAAATTAGGTGGTCTTGCTGAACATCTA ] [+] EMBL CD118766 [ TATACCAGTGTTTTATAAACCGAATACTTCTAACACTAAATATAATGTTCGACCGTTATCCAATGATGGGCATGTTGAATTAGGAGATTCGTCAATGGAACAGGTGACACATTTTTTGAGTGGCGCAGATGGTCATCGAGAAATCGAGTTTTT CTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGAAATTTTCGAACAACCAGAATCAGTGTTAAATACAATGAGAGGTCGAATAAAATTCGATATGAATACCGTGAAATTAGGTGGTCTTGCTGAACATCTA ] [+] EMBL SMAA69040 [ GTGGCGCAGATGGTCATCGAGAAATCGAGTTTTT CTTCGCTAGTTGTGCAAGTGCATTAATTGTTCATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATT ] [+] EMBL CD064461 [ AGTTTTT CTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAGAAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAAGTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGAAATTTTCGAACAACCAGAATCAGTGTTAAATACAATGAGAGGTCGAATAAAATTCGATATGAATACCGTGAAATTAGGTGGTCTTGCTGAACATCTAAGTGCAATACGTCGTTGCCGTCGACTCATATTTATTGGCTGTGGAACTAGTTATCATAGCGCAGTTGCAACACGTGCACTCATTGAAGAAATGTCTGAACTACCAGTTATGGTTGAATTAGCTAGTGATTTGTTAGATCGTAAAACCCC ] [+] EMBL CD201337 [ GCAACAAATAATGAAAGGTAATTATGATTATTTTATGCAAAAAGAAATTTTCGAACAACCAGAATCAGTGTTAAATACAATGAGAGGTCGAATAAAATTCGATATGAATACCGTGAAATTAGGTGGTCTTGCTGAACATCTAAGTGCAATACGTCGTTGCCGTCGACTCATATTTATTGGCTGTGGAACTAGTTATCATAGCGCAGTTGCAACACGTGCACTCATTGAAGAAATGTCTGAACTACCAGTTATGGTTGAATTAGCTAGTGATTTGTTAGATCGTAAAACCCCAATATTTCGTGATGATGTTTGTGTATTTATAAGTCAGTCGGGTGAAACAGCTGACACTTTGTTAGCTATGCGTTATTGTATCAAACGTGGAGCACTTGCTCTTGGTATCACAAACACTGTCGGTTCATCAATATCACGCGAATCACATTGTGGAGTGCATATCAATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATCGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACC ANACGTATTGCAATTATTGAAGCACTGTCTA ] [-] EMBL CD123028 [ ATTCGATATGAATACCGTGAAATTAGGTGGTCTTGCTGAACATCTAAGTGCAATACGTCGTTGCCGTCGACCCATATTTATTGGCTGTGGAACTAGTTATCATAGCGCAGTTGCAACACGTGCACTCATTGAAGAAATGTCTGAACTACCAGTTATGGTTGAATTAGCTAGTGATTTGTTAGATCGTAAAACCCCAATATTTCGTGATGATGTTTGTGTATTTATAAGTCAGTCGGGTGAAACAGCTGACACTTTGTTAGCTATGCGTTATTGTATCAAACGTGGAGCACTTGCTCTTGGTATCACAAACACTGTCGGTTCATCAATATCACGCGAATCACATTGTGGAGTGCATATCAATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGC ] [-] EMBL CD186628 [ AGCACTTGCTCTGGGTATCACAAACACTGTCGGTTCATCAATATCACGCGAATCACATTGTGGAGTGCATATCAATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACCAAAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTT ] [+] EMBL CD140411 [ TCGGTTCATCAATATCACGCGAATCACATTGTGGAGTGCATATCAATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACCAAAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATTGAT] [-] EMBL CD115987 [ TACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTG ] consensusID : consensus_10932#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 907 fasta sequence [CCTCCAGGCCAAAAATTCGGCCGAGGATCATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACCAAAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATTGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACTAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCAACGTGGA--TTGGATGTTGATTGCCCTAGAAATTTGGCAAAATCGGTGACAGTTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTCACCACCTCATTGAACTTTTATTACTATGCGGATATAAAGTCAATTAAAATCTTGCCTACAATTTGATTTTGTTGTTGTTAACTAAATCTCTAGTGATTATCTATTTCAAACGTTGTTTATACATGGATACATTGTCGTTTTATGCTTTGATATATATAACTTATTTCAATACT] [+] EMBL CD080136 [CCTCCAGGCCAAAAATTCGGCCGAGGATCATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACCAAAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATTGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACTAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCACCGTGGA TTGGATGTTGATTGCCCTANAAATTT ] [+] EMBL CD080064 [ cgaGCC AGAATTC GCCGAGGATCATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGCCTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCATCTCTCTTCAACCAAAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATACGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATTGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACTAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCCACGTGGATTTTGGATGTTGATTGCCCTAGAAATTTGGCANAATCGGTGACAGTTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAAT ] [+] EMBL CD079103 [ CTTGCCTGGAAGGCGCATTGAAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATTGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACTAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCAACGTGGA TTGGATGTTGATTGCCCTAGAAATTTGGCAAAATCGGTGACAGTTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTCACCACCTCATTGAACTTTTATTACTATGCGGATATAAAGTCAATTAAAATCTTGCCTACAATTTGATTNTGTTGTTGTTAACTAAATCTCTAGTGATTATCTATTTCAAACGTTGTTTATACATGGATACATTGTCGTTTTATGCTTTGATATATATAACTTATTTCAATACT] [-] EMBL CD140541 [ GAAGGTATTATGTCTGGTGAATTGAAACATGGTCCATTAGCAATGATCGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACTAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCAACGTGGA TTGGATGTTGATTGCCCTAGAAATTTGGCAAAATCGGTGACAGTTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTCACCACCTCATTGAACTTTTATTACTATGCGGATATAAAGTCAATTAAAATCTTGCCTACAATTTGATTTTGTTGTTGT ] [-] EMBL CD140420 [ ATTAGCAATGATTGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACTAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCAACGTGGA TTGGATGTTGATTGCCCTAGAAATTTGGCAAAATCGGTGACAGTTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTCACCACCTCATTGAACTTTTATTACTATGCGGATATAAAGTCAATTAAAATCTTGCCTACAATTTGATTTTGTTGTTGT ] [-] EMBL CD140386 [ TGATTGATAGTGAAAGTACTATTATTATGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATTAGAGCACGAAAGGGTCATCCGATTGTTATTTGCAGTGAGGGTGATTCGCAAGTTATGGCGGATGCATCATTTGCTATTCAAATACCTGAAACAGTTGATTGTTTACAAAGTGTACCAGCAGTTATTCCATTGCAATTGATTTCATTTCACATTGCGGTGCAACGTGGA TTGGATGTTGATTGCCCTAGAAATTTGGCAAAATCGGTGACAGTTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTCACCACCTCATTGAACTTTTATTACTATGCGGATATAAAGTCAATTAAAATCTTGCCTACAATTTGATTTTGTTGTTGT ] [+] EMBL CD114807 [ TGCATACTAGATCACTGTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTCACCTCCTCATTGAACTTTTATTACTATGCGGATATAAAGTCAATTAAAATCTTGCCTACAATTTGATTTTGTTGTTGTTAACTAAATCTCTAGTGATTATCTATTTCAAACGTTGTTTATACATGGATACA ] consensusID : consensus_10932#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 468 fasta sequence [AGTTCGGTCAAWTGGGAAACAYGGTGAKAACCAATTTTTTTTGAAGTGGGCGCAAGYATGGGTCAATCCGYAGAAAAATCGGAYGTTTTTTTCCTTCCGCTTAAGTTTGGTMGCAAAGGTGCCAATTAAAWTTGGAAACCATAKCTGGACCAAAAGGTTAATTTTTTTCTTAGGAAAGYATGYATGYATMGTAAGCCGGGCTTGGTTTCCGTTAAATGGGTCCAAACTTGGAACCAAAATTCCAATCGGTTTTAATCCAAAAGAAAGGTGGCAATCCAGGCGAACAACGGTTGAAAAGTTTGMTTAACCTTTTAACCAAAATTGGGAATTTGGCCAAACCAAAATTAAATGGAAAAGGGTAAATTAATGYATTAATTTTTAATGGCCAAAAAAAGAATATCGAACAACCAGAGTCAGTGTTAAATACAATGAGAGGTCGAATAAATTCGATATGAATACCGTGAAATT] [-] EMBL BE519443 [AGTTCGGTCAAWTGGGAAACAYGGTGAKAACCAATTTTTTTTGAAGTGGGCGCAAGYATGGGTCAATCCGYAGAAAAATCGGAYGTTTTTTTCCTTCCGCTTAAGTTTGGTMGCAAAGGTGCCAATTAAAWTTGGAAACCATAKCTGGACCAAAAGGTTAATTTTTTTCTTAGGAAAGYATGYATGYATMGTAAGCCGGGCTTGGTTTCCGTTAAATGGGTCCAAACTTGGAACCAAAATTCCAATCGGTTTTAATCCAAAAGAAAGGTGGCAATCCAGGCGAACAACGGTTGAAAAGTTTGMTTAACCTTTTAACCAAAATTGGGAATTTGGCCAAACCAAAATTAAATGGAAAAGGGTAAATTAATGYATTAATTTTTAATGGCCAAAAAAAGAATATCGAACAACCAGAGTCAGTGTTAAATACAATGAGAGGTCGAATAAATTCGATATGAATACCGTGAAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10932#0 GTGGAATATTTGCCTACCTCAATTATCAAGTTCCAGTTACACGCCAAGTCATTATAAACA 60 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CTTTGCTCAATGGCTTACATCGATTAGAATATCGTGGTTATGATTCTGCAGGACTAGCAG 120 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 TAGACGCCGTTTGTCCGGAACAGGATGACTTATCTACTAATGATGGGTCTCACAAGACTT 180 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 TTATTCGAGTTGTTCGTTGTAAAGGGAAAGTAGCATCATTGGGACAAGCTGTTAAAGAGT 240 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 TTCTAACCGATCATGACTTTCCAAATGAACTAATCACAACACATGTTGGCATAGCGCATA 300 consensus_10932#1 ---------------------------------------------CCTCCAGGCCAAAAA 15 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CTCGGTGGGCAACTCATGGTGAGCCAAATGAAGTAAATGCTCATCCCCAACGTTCTGGTC 360 consensus_10932#1 TTCGGCCGAGGA-TCATGCTGGACC---TGAAATTGGAG----TGGCTAGTACTAAGGCC 67 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CTGACAACGGATTCGTTGTAGTGCACAATGGTATTATAACCAACCACATAGATCTAAGGG 420 consensus_10932#1 TATACAAG----TCAATTAATTGCCC--TGGTAATGT------TCGCTTTAGTCT----- 110 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CATTACTGAGTCGTCGCGGTTATATATTCGAATCCGAAACAGATACAGAAGTGATTCCAA 480 consensus_10932#1 TATCTGAAGACCGCATCTCTCTTCAACCAAAACGTATTGCAATTATTGAAGCACTGTCTA 170 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 AATTTATGCAAATGATTTATGATTCACAT-AAAGAAAATCCCATTACCTTCTTAGAAGTT 539 consensus_10932#1 AGTTGT--CTGATCAGATACGTTCCATATTAAAGTTAGATTCG--ACATTACAAGAATTA 226 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 GTTGAATTGGTTGCTCAGCAACTGGAAGGATCGTTTGCAT-TAGCAACTAAAAGT-TGTT 597 consensus_10932#1 GCTAAAACAATTTATATGAAAAAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCT 286 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 ACTACCCTGGTGAATGTGCTGTGGCCAGGCGGGGTTCACCAATGTTGGTT--GGAATTAA 655 consensus_10932#1 ACTTGCCTGGAAGGCGCATTGAAATTAAA-GGAATTAACTTATATGCATGCAGAAGGTAT 345 consensus_10932#2 -----------------AGTTCGGTCAAWTGGGAAACAY-GGTGAKAACC-----AATTT 37 * * ** * * * consensus_10932#0 AAGTCCGCATGAATTGACA-ATGAATCATATACCAGTGTTTTATAAACCGAATACTTCTA 714 consensus_10932#1 TATGTCTGGTGAATTGAAACATGGTCCAT-TAGCAATGATTGATAGTGAAAGTACTATTA 404 consensus_10932#2 TTTTTGAAGTGGGCGCAAGYATGGGTCAATCCGYAG------AAAAATCGGAYGTTTTTT 91 ** * *** ** * * * * * consensus_10932#0 ACACTAAATATAATGTTCGACCGTT-ATCCAATGATGGGCATGTTGAATTA--GGAGATT 771 consensus_10932#1 TTA-TGATTATAACACGAGATCGTTTATTTAAAAAAACATTGAATGCATTATCAGAAATT 463 consensus_10932#2 TCCTTCCGCTTAA-GTTTGGTMGCA--------AAGGTGCCAATTAAAWTTGGAAACCAT 142 * *** * * * * * * * * consensus_10932#0 CGTCAATGGAACAGGTGACACATTTTTTGAGTGGCGCAGATGGTCATCGAGAAATCGAGT 831 consensus_10932#1 AGAGCACGAAA-GGGTCATCCGATTGTT-ATTTGCAGTGAGGGTGATTCGCAAGTTA--- 518 consensus_10932#2 AKCTGGACCAAAAGGTTAATTTTTTTCTTAGGAAAGYATGYATGYATMGTAAGCCGGGCT 202 ** *** * ** * * ** * consensus_10932#0 TTTTCTTCGCTAGTTGTGCAAGTGCATTAATTGAACATACTGACAAAGTTATTTTTCTAG 891 consensus_10932#1 -------TGGCGGATGCATCA-TTTGCTATTCAAATAC-CTGAAACAGTTGATTGTTTAC 569 consensus_10932#2 TGGTTTCCGTTAAATGGGTCCAAACTTGGAACCAAAATTCCAAT-CGGTT-TTAATCCAA 260 * ** ** * * * *** * * * consensus_10932#0 AAGATGATGATGTAGCGGCTGTTCGTAATGGTCAACTGACAATTCATCGTTTATCAAGAA 951 consensus_10932#1 AAAGTGTAC---TAGCAGTTATTC-CATTG--CAATTGAT--TTCAT--TTCACATTGCG 619 consensus_10932#2 AAGAAA-------GGTGGCAATCC-AGGCGAACAACGGTT---GAAAAGTTTGMTTAACC 309 ** * * * * * *** * * ** consensus_10932#0 GTGCATCAGCGACACGTGAAGTTGTTACTTTACAAATGGAATTGCAACAAATAATGAAAG 1011 consensus_10932#1 GTGCAAC-GTGGATTGGATGTTGATTGCCCTAGAAAT----TTGGCAAAATCGGTGACAG 674 consensus_10932#2 TTTTAACCAAAATTGGGAATTTGGCCAAACCAAAATT------AAATGGAAAAGGGTAAA 363 * * * * * * ** * * * * consensus_10932#0 GTAATTA--TGATTATTTTATGCAAA-AAGAAATTTTCGAACAACCAGAATCAGTGTTAA 1068 consensus_10932#1 TTGAATAATTGATCACTTTCCAAAATTAAAAAAATCATTTACAAATCGATGGAATATTTC 734 consensus_10932#2 TTAATGYATTAATTTTTAATGGCCAAAAAAAGAATATCGAACAACCAGAGTCAGTGTTAA 423 * * * ** * * ** * * * **** ** * * ** consensus_10932#0 ATACAATGAGAGGTCGAATAAAATTCGATATGAATACCGTGA-AATTAGGTGGTCTTGCT 1127 consensus_10932#1 ACCACCTCATTGAACTTTTATTACT--ATGCGGATATAAAGTCAATTAAA--ATCTTGCC 790 consensus_10932#2 ATACAATGAGAGGTCGAATAA-ATTCGATATGAATACCGTGA-AATT------------- 468 * * * * * ** * * ** * *** * **** consensus_10932#0 GAACATCTAAGTGCAATACGTCGTTGCCGTCGACTCA-TATTTATTGGCTGTGGAACTAG 1186 consensus_10932#1 TACAATTTGATT--------TTGTTGTTGTTAACTAAATCTCTAGTGATTAT----CTAT 838 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 TTATCATAGCGCAGTTGCAACACGTGCACTCATTGAAGAAATGTCTGAACTACCAGTTAT 1246 consensus_10932#1 TT--CA-AACGTTGTT--TATACATGGATACATTGTCGT--TTTATGCTTTGATATATAT 891 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 GGTTGAATTAGCTAGTGATTTGTTAGATCGTAAAACCCCAATATTTCGTGATGATGTTTG 1306 consensus_10932#1 AACTTATTTCAATACT-------------------------------------------- 907 consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 TGTATTTATAAGTCAGTCGGGTGAAACAGCTGACACTTTGTTAGCTATGCGTTATTGTAT 1366 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CAAACGTGGAGCACTTGCTCTTGGTATCACAAACACTGTCGGTTCATCAATATCACGCGA 1426 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 ATCACATTGTGGAGTGCATATCAATGCTGGACCTGAAATTGGAGTGGCTAGTACTAAGGC 1486 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CTATACAAGTCAATTAATTGCCCTGGTAATGTTCGCTTTAGTCTTATCTGAAGACCGCAT 1546 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CTCTCTTCAACCAAACGTATTGCAATTATTGAAGCACTGTCTAAGTTGTCTGATCAGATA 1606 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 CGTTCCATATTAAAGTTAGATTCGACATTACAAGAATTAGCTAAAACAATTTATATGAAA 1666 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 AAGAGCATTTTAGTCATGGGTCGTGGTTATAACTATGCTACTTGCCTGGAAGGCGCATTG 1726 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 AAATTAAAGGAATTAACTTATATGCATGCAGAAGGTATTATGTCTGGTGAATTGAAACAT 1786 consensus_10932#1 ------------------------------------------------------------ consensus_10932#2 ------------------------------------------------------------ consensus_10932#0 GGTCCATTAGCAATGATTGAT 1807 consensus_10932#1 --------------------- consensus_10932#2 --------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||