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Schistosoma mansoni
cluster # 10942 cluster # 10942       Sequences # 26       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10942#0 length = 1793 sequences # 25  
consensus_10942#1 length = 464 sequences # 1  

consensusID : consensus_10942#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 25
consensus length = 1793
fasta sequence
                              [TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAGTTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTTTGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCGCTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAGATGGAGTGACAACGT-CCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTTGAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTACGACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAGGTACAGAAGTGTTTTGAGCACC-GGTATAATCCCCTTG-GGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG-CCACATTGGAGTATTACTATAGTTAGCATATG-GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG-CGTATTTATTGAATAAACTGACTGAGATATATCACC-TTCTGATGTCATCCTACT-GACGTGCA-TTGCTGAACTA-CCCA-CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAAGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCATGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAGGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGGGGTGTT]

[+] EMBL CD124301             [TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAGTTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTTTGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCGCTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAGATGGAGTGACAACGT CCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTTGAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTACGACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTANGCACAGAAGTGTTTTGAGCACC GGTATAATCCCCTTG GGTGGGAGGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD092866             [TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAGTTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD080416             [                                                                                                                                                                                GCCGCTACAGATGNAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAGATGGAGTGACAACGTCCCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTTGAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTACGACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAGGTACAGAAGTGTTTTGAGCACC GGTATAATCCCCTTG GGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD133256             [                                                                                                                                                                                                                                                                                                                                                                                                          CATAACTTTTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGGGGCTTTAGGTACAGAAGTGTTTTGAGCACCGGGTATAAT CCCTTGTGGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGCCTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGGCGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD097002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTATAATCCCCTTG GGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD162975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD180698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACAGTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGAATGCTGCTGATGAGCTTGACTTTGAGATGATACTGGATGGTCCGGATCGTGAACTGAAGCATGTTGCTC CCACATTGTAGTGTTATTATAGTTAGCGTATGAGCTGACAGTGAGACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD180807             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGACTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD180847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tccACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD097049             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGAAGAGCTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD071607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGGAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTACCCCA C ATAAAAACATTTNCTGGNATTGTCGGGGCAGAAATAGAAAGCACACCNACATTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD200673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD071693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCCGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACCCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD200909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGTGAAAAATAAGCACGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTNTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGAAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAGCCGTA TTATTGGATTAACTGACTGAGATATATCACCTTTCTGATGTCATCCTACTGGAC T CATTTGCTGAACTACCCCA C ATAAAAAATTTTTCTGAATTTGT GGGGCAGAAT AGGAAGCCCACCACCTTTACCCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD200562             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTGNCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAACAGTTACCTTGTTGTGTATAAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCCTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCTTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD071537             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aAAGCATGTTGCTG CNGCATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD071531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGCCCACATTGGAGTATANCTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD115976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAGCTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGTTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD181039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD112132             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTCGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCACCAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD183346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAACGTATTCCCAGGACCACATAACTGACTA                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD071750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCATTAGATGAAGATTGTGGAAG CGTATNTACTGAATAAACTGACTGAGATATATCACC CTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD128996             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CATCCTACT GACGTGCA TTGTTGAACTA CCCA CAATAAAAACATTTCTTGGATTTGTCGGGGCAGAATAAGAAAGCACCCCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAGGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGGACTTGTACCATGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAGGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGG      ]
[-] EMBL CD200956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAGCGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAAGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTCGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGA                                                                                                                            ]
[-] EMBL CD155665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAAGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCATGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAGGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGTGGTGGTGTT]


>consensus_10942#0 TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAG TTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTT TGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCG CTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAG ATGGAGTGACAACGTCCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTT GAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTAC GACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAA CCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAG GTACAGAAGTGTTTTGAGCACCGGTATAATCCCCTTGGGTGGGAGGGTTAGCAGTGGAAA TAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGA TTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTG CCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGAT GAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCC ACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGT GGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTAC CTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCT GCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT GACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTAC TGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAG ACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATT GTGGAAGCGTATTTATTGAATAAACTGACTGAGATATATCACCTTCTGATGTCATCCTAC TGACGTGCATTGCTGAACTACCCACAATAAAAACATTTCCTGGATTTGTCGGGGCAGAAT AAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAA ACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAAG CAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCG AAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGAT GTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATAT TGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCAT GTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAG GTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGGGGTGTT



consensusID : consensus_10942#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 464
fasta sequence
                              [ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAGCTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCCACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTTAGCTGGAACTACCCTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACAT]

[-] EMBL CD200929             [ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAGCTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCCACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTTAGCTGGAACTACCCTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACAT]


>consensus_10942#1 ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAG CTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAGCTTGTTTAGCTAGAATTTCTTT AAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTG TTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGA TGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGC CACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGG TGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTTAGCTGGAACTA CCCTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10942#0      TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAG 60
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTT 120
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCG 180
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      CTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAG 240
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      ATGGAGTGACAACGTCCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTT 300
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      GAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTAC 360
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      GACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAA 420
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      CCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAG 480
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      GTACAGAAGTGTTTTGAGCACCGGTATAATCCCCTTGGGTGGGAGGGTTAGCAGTGGAAA 540
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGA 600
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTG 660
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      CCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGAT 720
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      GAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCC 780
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      ACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGT 840
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      GGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTAC 900
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      CTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCT 960
consensus_10942#1      ----------------------------------ACGAGACATTATGTGTTCCTGTTCCT 26
                                                         **************************

consensus_10942#0      GCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT 1020
consensus_10942#1      GCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT 86
                       ************************************************************

consensus_10942#0      GACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTAC 1080
consensus_10942#1      GACGCTGATGAGCTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTAC 146
                       *********** ************************************************

consensus_10942#0      TGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAG 1140
consensus_10942#1      TGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAG 206
                       ************************************************************

consensus_10942#0      ACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATT 1200
consensus_10942#1      ACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAG-CTTGATTTTGAGATGA----T 261
                       ************************************** * ** *  * ******    *

consensus_10942#0      GTGGAAGCGTATTTATTGAATAAACTGACTGAGATATATCACCTTCTGATGTCATCCTAC 1260
consensus_10942#1      ACTGAATGGTACGGATCG------TGAACTGAAGCATGTTGCTGCC--ACATTGGAGTAT 313
                          ***  ***   ** *         *****   ** *  *   *  *  *     ** 

consensus_10942#0      TGACGTGCATTGCTGAACTACCCACAATAAAAACATTTCCTGGATTTGTCGGGGCAGAAT 1320
consensus_10942#1      TACTATA-GTTAGCATATGGCTGACAGTGAGA----CTCATTGGGTTGCTGGT---GGAC 365
                       *    *   **     *   *  *** * * *     ** * *  ***  **    * * 

consensus_10942#0      AAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAA 1380
consensus_10942#1      AAGGTTAC-TGCTAGATTGGTTCATAGACGTATAAAC------------AAGTCCTTAG- 411
                       ***    *   * *   *    *  ******   * *            * *  ** *  

consensus_10942#0      ACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATG-CGAA 1439
consensus_10942#1      --------CTGGAACTACCCTGCTGTCCGCT-AGTGGACTGGGA--AAGAGAATGACGAG 460
                               *  * ** **    *** *   *  * * **  ***  *  ** *** *** 

consensus_10942#0      GCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGC 1499
consensus_10942#1      ACAT-------------------------------------------------------- 464
                        **                                                         

consensus_10942#0      GAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGA 1559
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATA 1619
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCA 1679
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      TGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCA 1739
consensus_10942#1      ------------------------------------------------------------
                                                                                   

consensus_10942#0      GGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGGGGTGTT 1793
consensus_10942#1      ------------------------------------------------------
                                                                             




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)