These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10959#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1062 fasta sequence [TTTTATTAGACAGAAATCAGACGTTCCATGTATTGACTTACGAATTGTATTCGGTTCTAAGTCATATTCAGGTTTCATCTGTTTGACTGTTTTGCTTTCACGCTTGTGTTGTCGATAATTGCTATCGATTGCTCTTCTTAATAAAACTTTAAGATATGCCACTTCCTAAACATACAGTTCAACCAGTCAAACTCAGTCAGGTAGTTGTTCCGAATGGCATCGACAATGAGTTAGAATTTGTGGTTAATTCCACGGTCTGCAATGTCATGAGACAGATAGCGTCAGTTAGCCGATTGGCCAATACCATGTTCGAAGAACTCACTACCGATTTTTCTCGACTAGTTGAGCGGACTATTCGTCTGCAAAATCGTCTGGGTAAACTTCATGAAGATATGCAAATGGCACGCAGCGGAGACGAAGACCTTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTAT-CATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCANAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATC] [+] EMBL CD161077 [TTTTATTAGACAGAAATCAGACGTTCCATGTATTGACTTACGAATTGTATTCGGTTCTAAGTCATATTCAGGTTTCATCTGTTTGACTGTTTTGCTTTCACGCTTGTGTTGTCGATAATTGCTATCGATTGCTCTTCTTAATAAAACTTTAAGATATGCCACTTCCTAAACATACAGTTCAACCAGTCAAACTCAGTCAGGTAGTTGTTCCGAATGGCATCGACAATGAGTTAGAATTTGTGGTTAATTCCACGGTCTGCAATGTCATGAGACAGATAGCGTCAGTTAGCCGATTGGCCAATACCATGTTCGAAGAACTCACTACCGATTTTTCTCGACTAGTTGAGCGGACTATTCGTCTGCAAAATCGTCTGGGTAAACTTCATGAAGATATGCAAATGGCACGCAGCGGAGACGAAGACCTTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTANATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAA ] [+] EMBL CD113068 [ AGTTAGAATTTGTGGTTAATTCCACGGTCTGCAATGTCATGAGACAGATAGCGTCAGTTAGCCGATTGGCCAATACCATGTTCGAAGAACTCACTACCGATTTTTCTCGACTAGTTGAGCGGACTATTCGTCTGCAAAATCGTCTGGGTAAACTTCATGAAGATATGCAAATGGCACGCAGCGGAGACGAAGACCTTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCC ] [+] EMBL CD113180 [ TTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGGTGATAGGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTAT CATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAAT ] [+] EMBL CD113226 [ TTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGATAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTAT CATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAA ] [+] EMBL CD113236 [ TTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCCCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTAT CATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCGCCCCCGCCACC ] [+] EMBL CD113256 [ TTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAAC TATCCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAAT CTT A TA CACCCCg ] [+] EMBL CD113240 [ TTACTGCTGGGGTACAAGAAGTTGAGGTTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTAT CATTCAGCAACCAGGAGTCGGTGGTCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCANAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATC] [+] EMBL CD113196 [ TTACTGCTGGGGTACAAGAAGTTGAGGTTCCGGTGTTCTCTAGCAAAAAGCCAACCGATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAGCAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTAT CATTCAGCAACCAGGAGTCGGTGGTCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAA ] consensusID : consensus_10959#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 810 fasta sequence [AGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCACCAACACTTCCTCCAGCTTTCTTGAGCGACAGAGAGTCAAAAGTTCCAGATATTAACAAAAATTCACATCCGAATGATGAAGCTGCTAGCAGAGACCCCTCTGGACAAGATGGAAATGGTAGGATATCACCACCCACACAAATGCATGATGGCAAAGAAGCC] [+] EMBL CD129276 [AGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAACCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAGACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACAC ] [-] EMBL CD113192 [ AAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTTAAAGTGGATCTAATCAGGGAGTTCAGGAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTACCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCAC ] [+] EMBL CD118967 [ GCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGAACCTTCAC ] [-] EMBL CD119016 [ CCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACC ] [-] EMBL CD119091 [ CCGCCAAGAAGAAAAGACCGAAAGTAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACC ] [-] EMBL CD119109 [ CCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACC ] [+] EMBL CD112157 [ AGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCACAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCAACAACAATTCCTCCAGCTTTCTTGAGC ] [+] EMBL CD112511 [ AGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGACAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTNGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATAGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCAACAACACTTCCTCCAGCTTTCTTGAGCGACAGAGAGTCAAAAGT ] [+] EMBL CD112531 [ AGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAGAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGCTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCAACAACAACTCCTCCAGCTTTCTTG ] [-] EMBL CD062184 [ GGGAGTTCAGAAACCTCAACTTATCATTCAGCAANCAGGAGTTGGTGGCCATAAACTTCCCGCATCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCACCACCACTTCCTCCAGCTTTCTTGAGCGACAGAGAGTCAAAAGTTCCAGATATTAACAAAAATTCACATCCGAATGATGAAGCTGCTAGC ] [+] EMBL CD168092 [ GGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGTAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACAC ] [+] EMBL CD168057 [ CATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGTAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACAC ] [-] EMBL CD112123 [ AGTATTGTCAACGGTAAACCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATACAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCACCACCACTTCCTCCAGCTTTCTTGAGCGACAGAGAGTCAAAAGTTCCAGATATTAACAAAAATTCACATCCGAATGATGAAGCTGCTAGCAGAGACCCCTCTGGACAAGATGGAAATGGTAGGATAT ] [-] EMBL CD184387 [ CCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCNCCGCCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAGATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCACCACCACTTCCTCCAGCTTTCTTGAGCGACAGAGAGTCAAAAGTTCCAGATATTAACAAAAATTCACATCCGAATGATGAAGCTGCTAGCAGAGACCCCTCTGGACAAGATGGAAATGGTAGGATATCACCACCCACACAAATGCATGATGGCAAAGAAGCC] consensusID : consensus_10959#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 317 fasta sequence [TTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTC] [+] EMBL CD202392 [TTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTCAGCAACCAGGAGTTGGTGGCCATAAACTTCCCGCACCGTTATCCGAGCAAAACGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAATGCCAGTATTGTCAACACAAGTTGATAATGCAAAGGATTTTCGACATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAATCCGTTTC] consensusID : consensus_10959#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 217 fasta sequence [ATCTATAAGGTCCGCAAAATAACTATGAATTACTTTTGTATAGAGCTTAGGTGGTGTGGCTGGATGTGGCCCAGATGTAGTCATCATTAATATTCCTTTAAGGTCAGGTTTANTTGGNCAATAATCACTTTCCTTGGTTAGATGCATGTCGAAAATCCTNTGCATTATCAACTCGTGTTGNCGGATGAAGAGCATTCGGCGGNGGTGGCGGCGGTGG] [-] EMBL SMRAP144 [ATCTATAAGGTCCGCAAAATAACTATGAATTACTTTTGTATAGAGCTTAGGTGGTGTGGCTGGATGTGGCCCAGATGTAGTCATCATTAATATTCCTTTAAGGTCA ] [+] EMBL SMRAP160 [ CTATAAGGTCCGCAAAATAACTATGAATTACTTTTGTATAGAGCTTAGGTGGTGTGGATGGATGTGGNCCAGATGTAGTCATCATTAATATTCCTTTAAGGTCAGGTTTANTTGGNCAATAATCACTTTCCTTGGTTAGATGCATGTCGAAAATCCTNTGCATTATCAACTCGTGTTGNCGGATGAAGAGCATTCGGCGGNGGTGGCGGCGGTGG] consensusID : consensus_10959#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 162 fasta sequence [CAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAATATTAACAAAAATTCACATCCGAATGATG] [+] EMBL CD193735 [CAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGCATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAATGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAATATTAACAAAAATTCACATCCGAATGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 TTTTATTAGACAGAAATCAGACGTTCCATGTATTGACTTACGAATTGTATTCGGTTCTAA 60 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 GTCATATTCAGGTTTCATCTGTTTGACTGTTTTGCTTTCACGCTTGTGTTGTCGATAATT 120 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 GCTATCGATTGCTCTTCTTAATAAAACTTTAAGATATGCCACTTCCTAAACATACAGTTC 180 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 AACCAGTCAAACTCAGTCAGGTAGTTGTTCCGAATGGCATCGACAATGAGTTAGAATTTG 240 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 TGGTTAATTCCACGGTCTGCAATGTCATGAGACAGATAGCGTCAGTTAGCCGATTGGCCA 300 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 ATACCATGTTCGAAGAACTCACTACCGATTTTTCTCGACTAGTTGAGCGGACTATTCGTC 360 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 TGCAAAATCGTCTGGGTAAACTTCATGAAGATATGCAAATGGCACGCAGCGGAGACGAAG 420 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ------------------------------------------------------------ consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 ACCTTACTGCTGGGGTACAAGAAGTTGAGATTCCGGTGTTCTCTAGCAAAAAGCCAACCG 480 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 -----------------------------------------------------------A 1 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 ATAGCCAGGTATTAAATCAAAATACCATACCTCCTTCTATGCGGTCACAATATGATCAAG 540 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 GACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAAAAGCTGCT 61 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 CAGAAGCAGCTCCAGCACTTCAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGC- 599 consensus_10959#4 --------------------CAACAAATGGATGAACTCAGAGATGATAAGAAAACTAGC- 39 consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 CCCGTTAAAAGTGGATCTAATCAGGGAGCAGCTTTTTCTTTGATTTATGGAGTCAGGAAA 121 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 --------ATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAA 651 consensus_10959#4 --------ATGAGATTGTATTCAGATCCCAGCTTTTTCTTTGATTTATGGAGTCAGGAAA 91 consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 TGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAA 181 consensus_10959#2 --TTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAA 58 consensus_10959#0 TGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAAGACCGAAAATAAAGGGAA 711 consensus_10959#4 TGTTACAAGACCGCAAGCACAAAAGAGCCGCCAAGAAAAAAATATTAACAA--------A 143 consensus_10959#3 ----------------ATCTATAAGGTCCGCAAAATAACTATGAATTACTTTT--GTATA 42 * *** **** ** ** * * * * consensus_10959#1 AAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTC 241 consensus_10959#2 AAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTC 118 consensus_10959#0 AAGCTGCTCCCGTTAAAAGTGGATCTAATCAGGGAGTTCAGAAACCTCAACTTATCATTC 771 consensus_10959#4 AATTCACATCCG--AATGATG--------------------------------------- 162 consensus_10959#3 GAGCT-TAGGTGGTGTGGCTGGATGTGGCCCAGATGT--AGTCATCATTAATATTCCTTT 99 * * ** consensus_10959#1 AGCAACCAGGAGTTGGTGGCCA-TAA--ACTTCCCGCACCGTTATCCGAGCAAAA----- 293 consensus_10959#2 AGCAACCAGGAGTTGGTGGCCA-TAA--ACTTCCCGCACCGTTATCCGAGCAAAA----- 170 consensus_10959#0 AGCAACCAGGAGTTGGTGGCCA-TAA--ACTTCCCGCACCGTTATCCGAGCAAAA----- 823 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 AA-GGTCAGGTTTANTTGGNCAATAATCACTTTCCTTGGTTAGATGCATGTCGAAAATCC 158 consensus_10959#1 -CGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAAT-GCCAGTATTGTCAACGGTAAA 351 consensus_10959#2 -CGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAAT-GCCAGTATTGTCAAC------ 222 consensus_10959#0 -CGGTTCTGTTAATGCCAGTTCTCATATGGATAGAAAT-GCCAGTATTGTCAACGGTAAA 881 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 TNTGCATTATCAACTCGTGTTGNCGGATGAAGAGCATTCGGCGGNGGTGGCGGCGGTGG- 217 consensus_10959#1 CCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCG 411 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 CCCACCCAACATCAGTTTGTGAATAATGGGGATTTTGGGAATCCTTCATTACCACCCCCG 941 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 CCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCAAAGGATTTTCGA 471 consensus_10959#2 --------------------------------ACAAGTTGATAATGCAAAGGATTTTCGA 250 consensus_10959#0 CCACCTCCACCGAATGCTCTTCATCCGTCAACACAAGTTGATAATGCANAGGATTTTCGA 1001 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 CATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAAT 531 consensus_10959#2 CATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAAT 310 consensus_10959#0 CATGCATCTAACCAAAAAAGTGATTATTGCCCAATTAAACCTGACCTTGATGGTGTCAAT 1061 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 CCGTTTCCTTCAGTTACCAACAACATTTGTATCAACCATGACCCTTCACCAGCCCATCAG 591 consensus_10959#2 CCGTTTC----------------------------------------------------- 317 consensus_10959#0 C----------------------------------------------------------- 1062 consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ATGACTCTTCCTGATCCTCCCGCACTCCATACACAAATGGCATCTCTTATTTTACCACCA 651 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 ------------------------------------------------------------ consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ACACTTCCTCCAGCTTTCTTGAGCGACAGAGAGTCAAAAGTTCCAGATATTAACAAAAAT 711 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 ------------------------------------------------------------ consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 TCACATCCGAATGATGAAGCTGCTAGCAGAGACCCCTCTGGACAAGATGGAAATGGTAGG 771 consensus_10959#2 ------------------------------------------------------------ consensus_10959#0 ------------------------------------------------------------ consensus_10959#4 ------------------------------------------------------------ consensus_10959#3 ------------------------------------------------------------ consensus_10959#1 ATATCACCACCCACACAAATGCATGATGGCAAAGAAGCC 810 consensus_10959#2 --------------------------------------- consensus_10959#0 --------------------------------------- consensus_10959#4 --------------------------------------- consensus_10959#3 --------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||