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Schistosoma mansoni
cluster # 10968 cluster # 10968       Sequences # 27       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10968#0 length = 720 sequences # 6  
consensus_10968#1 length = 633 sequences # 18  
consensus_10968#2 length = 430 sequences # 3  

consensusID : consensus_10968#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 720
fasta sequence
                              [ATACCCTTGAAATTGTTAAACTAAGGGAGCCCGGGTTTTTTGTTTCGAGCGCGTTGCAATGGTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGTTTGATATTTCTAAGATGCGTTGGAGAGGAGAATAACTTGTTATTAATTCGATGTAGTGTTAGATGTAACATTTGAAATAAACTGTAAGTTCTTCAGTTTGGGGCTTCGATTTATTCGGTGCATGGCACGC]

[-] EMBL CD149916             [ATACCCTTGAAATTGTTAAACTAAGGGAGCCCGGGTTTTTTGTTTCGAGCGCGTTGCAATGGTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCACGTTCAGTGCTTTCTCCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAA                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD126527             [                                 cggTTTTTGTTTCGAGCGCGTTGCAATGGTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCTGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAA                                                                                                                                                                          ]
[+] EMBL CD136744             [                                            TCGAGCGCGTTGCAATGGTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCTTATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAANAACGTACTCGA                                                                                                                                                                                                               ]
[+] EMBL CD134002             [                                             ccacCGCGTTGCAATGGTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGTTTGATA                                                                                                                            ]
[-] EMBL CD149927             [                                                               GTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCACGTTCAGTGCTTTCTCCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAA                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD065507             [                                                                                                                                                                                                                                                                                                                                                                                                       GCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGGAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGTCTGATATTTCTAAGATGCGTTGGAGAGGAGAATAACTTGTTATTAATTCGATGTAGTGTTAGATGTAACATTTGAAATAAACTGTAAGTTCTTCAGTTTGGGGCTTCGATTTATTCGGTGCATGGCACGC]


>consensus_10968#0 ATACCCTTGAAATTGTTAAACTAAGGGAGCCCGGGTTTTTTGTTTCGAGCGCGTTGCAAT GGTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGT CGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAAT AGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTT GGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAG GGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCG TCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGG ACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTAC GTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTT ATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGTTTGATATTTC TAAGATGCGTTGGAGAGGAGAATAACTTGTTATTAATTCGATGTAGTGTTAGATGTAACA TTTGAAATAAACTGTAAGTTCTTCAGTTTGGGGCTTCGATTTATTCGGTGCATGGCACGC



consensusID : consensus_10968#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 633
fasta sequence
                              [CTACGAGGCCANAATTTGGCACGAGGCGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA-AAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGTTAGATATTTCTAAGATGCGTTGGAGAGAAGAATAACTTGTTATTAATTCGATGTAGTGTTAGATGTAACATTTGAAATAAACTG]

[+] EMBL CD081145             [CTACGAGGCCANAATTTGGCACGAGGCGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGTTAGATATTTCTAAGATGCGTTGGAGAGAAGAATAACTTGTTATTAATTCGATGTAGTGTTAGATGTAACATTTGAAATAAACTG]
[+] EMBL AI977452             [                          CGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAAGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAACAAGTGTTCAGTCGGTCAGGATCAATTG                                                                                                   ]
[-] EMBL CD091457             [                              CCTGTCCTGTGTACCTTACTTTATGTAGGAGAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTTGCAACCATACCCCTGAAATTGGTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATA                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD136238             [                                                                                GCTCCAAAGGACTCATGTTCAGTGCTTTCGCCATTGGAGCAAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGACGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAAT                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD111465             [                                                                                                                                                       AATGGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGTCGAAAAACGTATTCGAACTGTCTGAGTATAGAGATGCAGTTTTATACAAAATGAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAG                                                                                     ]
[+] EMBL CD111335             [                                                                                                                                                       AATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAG                                                                                     ]
[-] EMBL CD134882             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD192088             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD192155             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD192250             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD192252             [                                                                                                                                                                                                                                                                                                                 AAGACATTGTATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD192260             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD134850             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AGGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD134852             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AGGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD134925             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAATA AAGTGTTCAGTCGGT                                                                                                               ]
[-] EMBL CD134945             [                                                                                                                                                                                                                                                                                                                 AAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGCTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAA AAGTGTTCAGTCGGT                                                                                                               ]
[+] EMBL CD128438             [                                                                                                                                                                                                                                                                                                                                                          ATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGT                                                                                                                                          ]
[+] EMBL CD128437             [                                                                                                                                                                                                                                                                                                                                                                CGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTT                                                                                                                                         ]


>consensus_10968#1 CTACGAGGCCANAATTTGGCACGAGGCGGACCTGTCCTGTGTACTTTACTTTATGTAGGA GAGCAACGGCTGCAGCAGTCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGC AAAAATTCTACCCACAAATAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTC CTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCC CTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAG AAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAA ACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCT TTTACATATACATCCGTACGTTTGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTG AGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATA TCTATAAGTTAGATATTTCTAAGATGCGTTGGAGAGAAGAATAACTTGTTATTAATTCGA TGTAGTGTTAGATGTAACATTTGAAATAAACTG



consensusID : consensus_10968#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 430
fasta sequence
                              [AATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGGTAAGTTGTGGTCATAGAACTCATAACTGTAGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGT]

[+] EMBL CD111393             [AATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGGTAAGTTGTGGTCATAGAACTCATAACTGTAGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAG ]
[+] EMBL CD110893             [AATGGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGGTAAGTTGTGGTCATAGAACTCATAACTGTAGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGCGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAG ]
[-] EMBL CD111034             [ ATAGTGGNTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAGGAAGTAAAGACATTATATCGTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGGTAAGTTGTGGTCATAGAACTCATAACTGTAGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGATATCTATAAGT]


>consensus_10968#2 AATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATTTGGCGTACCCTTA CCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAAGGGAGAAAGAACA AGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATCGTCATAGCTTTCA ACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTGGACTAGCATATGG TTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTACGTTTGGTAAGTT GTGGTCATAGAACTCATAACTGTAGTTGTAATACCGCCGAAAAACGTACTCGAACTGCCT GAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGGATCAATTGGTGAT ATCTATAAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10968#0      ATACCCTTGAAATTGTTAAACTAAGGGAGCCCGGGTTTTTTGTTTCGAGCGCGTTGCAAT 60
consensus_10968#1      ------------------------------------------CTACGAGGCCANAATTTG 18
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      G-GTGTTACGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAG 119
consensus_10968#1      GCACGAGGCGGACCTGTCCTGTGTACTTTACTTTATGTAGGAGAGCAACGGCTGCAGCAG 78
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAA 179
consensus_10968#1      TCGCTCCAAAGGACTCATGTTCAGTGCTTTCACCATTGGAGCAAAAATTCTACCCACAAA 138
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATT 239
consensus_10968#1      TAGGTAACCGTGAAATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATT 198
consensus_10968#2      -------------AATAGTGGGTTTCGGTAGGAATGGGATTCCTATGTATTATGATGATT 47
                                    ***********************************************

consensus_10968#0      TGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAA 299
consensus_10968#1      TGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAA 258
consensus_10968#2      TGGCGTACCCTTACCCTTCAATCAGATTTCGCAACCATACCCCTGAAATTGCTAAACTAA 107
                       ************************************************************

consensus_10968#0      GGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATC 359
consensus_10968#1      GGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATC 318
consensus_10968#2      GGGAGAAAGAACAAGGGGACTGGAGTAAATTGACAACCGAAGAAGTAAAGACATTATATC 167
                       ************************************************************

consensus_10968#0      GTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTG 419
consensus_10968#1      GTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTG 378
consensus_10968#2      GTCATAGCTTTCAACGTACTTTTGCTGAATTAGCCGCTCCAAACGGCCAATGGAAACTTG 227
                       ************************************************************

consensus_10968#0      GACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTA 479
consensus_10968#1      GACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTA 438
consensus_10968#2      GACTAGCATATGGTTTAATTTTCATTAGTATCGGCCTTTCCTTTTACATATACATCCGTA 287
                       ************************************************************

consensus_10968#0      CGTTTG--------------------------------TTGTAATACCGCCGAAAAACGT 507
consensus_10968#1      CGTTTG--------------------------------TTGTAATACCGCCGAAAAACGT 466
consensus_10968#2      CGTTTGGTAAGTTGTGGTCATAGAACTCATAACTGTAGTTGTAATACCGCCGAAAAACGT 347
                       ******                                **********************

consensus_10968#0      ACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGG 567
consensus_10968#1      ACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGG 526
consensus_10968#2      ACTCGAACTGCCTGAGTATAAAGATGCAGTTTTATACAAAAAAGTGTTCAGTCGGTCAGG 407
                       ************************************************************

consensus_10968#0      ATCAATTGGTGATATCTATAAGTTTGATATTTCTAAGATGCGTTGGAGAGGAGAATAACT 627
consensus_10968#1      ATCAATTGGTGATATCTATAAGTTAGATATTTCTAAGATGCGTTGGAGAGAAGAATAACT 586
consensus_10968#2      ATCAATTGGTGATATCTATAAGT------------------------------------- 430
                       ***********************                                     

consensus_10968#0      TGTTATTAATTCGATGTAGTGTTAGATGTAACATTTGAAATAAACTGTAAGTTCTTCAGT 687
consensus_10968#1      TGTTATTAATTCGATGTAGTGTTAGATGTAACATTTGAAATAAACTG------------- 633
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TTGGGGCTTCGATTTATTCGGTGCATGGCACGC 720
consensus_10968#1      ---------------------------------
consensus_10968#2      ---------------------------------
                                                        




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)