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Schistosoma mansoni
cluster # 10980 cluster # 10980       Sequences # 27       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10980#0 length = 1344 sequences # 9  
consensus_10980#1 length = 1161 sequences # 18  

consensusID : consensus_10980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1344
fasta sequence
                              [CTGAACAACGTGCTATTTATGATAGTTTTGGTTATAAAGGGTTGCAAATGCAAGGGTGGCAAATAACGAGTTCTCAAAAATCAGCACCTGAACTTCGTCTGGAATATCTTCTTTTGAAAGAAAAAGCTCGAGTTTCAAAGCAACTTCAATTGACACAACCAACCTCAGAATTTTCTCTTGGCTTAGATTTAACGGATGTTTTTGATCGTTATTTGAAGGAGCCACCAGAAGATCGTTCATTGATTCCAATTCCATCAATTTATGAGCTTTCTGTTGCTCAATCTATCAATGCTGGTATCAGCATAAAAAACTCAGTAAGTTTAGCTGGTCAGGTGACAGCCCACAACGGAGTAGGAATAGGGACATTTCTTGCTATATGGCGGCATCACTGCTCCAGAAAGTCAATTTTCGGCCCAACTACAATCGATACTGAGTTTTCTTACGGTCGTGCTGGTCGTGGATTGAGTACTGGTATACGAGCAAGGCGAAATTTCGGACAGCGTTTCCATGGTAGTTTAGGCTTATCTCTAGCTAGTTTATATGAAAGATCTCCCAAGTCGAGTATAAATCTAATCCCTGGTATTTCTGCTGGTGTAAATATCCAGTTGTTATCTCATGTACATGCACACTTGGAGTTACGTTGTCTCATGAACCCAGGTATATCGAGTGAATTGTTCTTTGCTTCTGCTGACGGTGAGTATAATGCACGGATTTCAAGTAAACTTAACGCATCTGGTTATGCAAGCCTTTCCCTGATACTGGAAAAGTCCGTCTCATGGACTTGGTTGAATCCACCTCGAGGATCTGGTGTAATTGATAAGGAAAATGTTCCTCAACCTGATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAGTAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTGGCCAGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAA]

[+] EMBL CD156816             [CTGAACAACGTGCTATTTATGATAGTTTTGGTTATAAAGGGTTGCAAATGCAAGGGTGGCAAATAACGAGTTCTCAAAAATCAGCACCTGAACTTCGTCTGGAATATCTTCTTTTGAAAGAAAAAGCTCGAGTTTCAAAGCAACTTCAATTGACACAACCAACCTCAGAATTTTCTCTTGGCTTAGATTTAACGGATGTTTTTGATCGTTATTTGAAGGAGCCACCAGAAGATCGTTCATTGATTCCAATTCCATCAATTTATGAGCTTTCTGTTGCTCAATCTATCAATGCTGGTATCAGCATAAAAAACTCAGTAAGTTTAGCTGGTCAGGTGACAGCCCACAACGGAGTAGGAATAGGGACATTTCTTGCTATATGGCGGCATCACTGCTCCAGAAAGTCAATTTTCGGCCCAACTACAATCGATACTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD148369             [                                                                                                                                                                                                                                                                                                                                                              GTAGGAATAGGGACATTTCTTGCTATATGGCGGCATCACTGCCCCAGAAAGTCAATTTTCGGCCCAACTACAATCGATACTGAGTTTTCTTACGGTCGTGCTGGTCGTGGATTGAGTACTGGTATACGAGCAAGGCGAAATTTCGGACAGCGTTTCCATGGTAGTTTAGGCTTATCTCTAGCTAGTTTATATGAAAGATCTCCCAAGTCGAGTATAAATCTAATCCCTGGTATTTCTGCTGGTGTAAATATCCAGTTGTTATCTCATGTACATGCACACTTGGAGTTACGTTGTCTCATGAACCCAGGTATATCGAGTGAATTGTTCTTTGCTTCTGCTGACGGTGAGTATAATGCACGGATTTCAAGTAAACTTAACGCATCTGGTTATGCAAGCCTTTCCCTGATACTGGAAAAGTCCGTCTCATGGACTTGGTTGAATCCACCTCGAGGATCTGGTGTAATCGATAAGGAAAATGTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD072133             [                                                                                                                                                                                                                                                                                                                                                              GTATGAATAGGGACATTTCTTGCTATATGGCGGCATCACTGCTCCAGAAAGTCAATTTTCGGCCCAACTACAATCGATACTGAGATATCTTACGGTCGTGCTGGTCGTGGATTGAGTACTGGTATACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD148363             [                                                                                                                                                                                                                                                                                                                                                              GTAGGAATAGGGACATTTCTTGCTATATGGCGGCATCACTGCTCCAGAAAGTCAATTTTCGGCCCAACTACAATCGATACTGAGTTTTCTTACGGTCGTGCTGGTCGTGGATTGAGTACTGGTATACGAGCAAGGCGAAATTTCGGACAGCGTTTCCATGGTAGTTTAGGCTTATCTCTAGCTAGTTTATATGAAAGGTCTCCCCCGTCGAGTATAAATCTAATCCCTGGTATTTCTGCTGGTGTAAATATCCAGTTGTTATCTCATGTACATGCCTACTTGGAGTTACGTTGTCTCATGAACCCAGGTATATCGAGTGAATTGTTCTTTGCTTCTGCTGACGGTGAGTATAATGCACGGATTTCAAGTAAACTTAACGCATCTGGCTATGCAAGCCTTTCCCTGATACTGGAAAAGTCCGTCTCATGGACTTGGTTGAATCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD148392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTCATGTACATGCACACTTGGAGTTACGTTGTCTCATGAACNCAGGTATATCGAGTGAATTGTTCTNTGCTTCTGCTGACGGTGAGTATAATGCACGGATTTCAAGTAAACTTAACGCATCTGGTTATGCAAGCCTTTCCCTGATACTGGAAAGGTCCGTCTCATGGACTTGGTTGAATCCACCTCGAGGATCTGGTGTAATTGATAAGGAAAATGTTCCTCAACCTGATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAGTAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACT                                                                                                                                                                                                                 ]
[-] EMBL CD148344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCACACTTGGAGTTACGTTGTCTCATGAACCCAGGTATATCGAGTGAATTGTTCTTTGCTTCTGCTGACGGTGAGTATAATGCACGGATTTCAAGTAAACTTAACGCATCTGGTTATGCAAGCCTTTCCCTGATACTGGAAAGGTCCGTCTCATGGACTTGGTTGAATCCACCTCGAGGATCTGGTGTAATTGATAAGGAAAATGTTCCTCAACCTGATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAGTAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACT                                                                                                                                                                                                                 ]
[-] EMBL CD148329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGGCAAGCCTTTCCCTGATACTGGAAAAGTCCGTCTCATGGACTTGGTTGAATCCACCTCGAGGATCTGGTGTAATTGATAAGGANAATGTTCCTCAACCTGATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAGTAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTGGCCAGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAA]
[-] EMBL CD145179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAAATGTTCCTCAACCTGATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAGTAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTGGCCAGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCGAGCAA]
[+] EMBL CD163928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGATTTGGAACAACAGCGACGCAGTAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCACAATGTCAAATTACCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCT                                                                                                                                                                            ]


>consensus_10980#0 CTGAACAACGTGCTATTTATGATAGTTTTGGTTATAAAGGGTTGCAAATGCAAGGGTGGC AAATAACGAGTTCTCAAAAATCAGCACCTGAACTTCGTCTGGAATATCTTCTTTTGAAAG AAAAAGCTCGAGTTTCAAAGCAACTTCAATTGACACAACCAACCTCAGAATTTTCTCTTG GCTTAGATTTAACGGATGTTTTTGATCGTTATTTGAAGGAGCCACCAGAAGATCGTTCAT TGATTCCAATTCCATCAATTTATGAGCTTTCTGTTGCTCAATCTATCAATGCTGGTATCA GCATAAAAAACTCAGTAAGTTTAGCTGGTCAGGTGACAGCCCACAACGGAGTAGGAATAG GGACATTTCTTGCTATATGGCGGCATCACTGCTCCAGAAAGTCAATTTTCGGCCCAACTA CAATCGATACTGAGTTTTCTTACGGTCGTGCTGGTCGTGGATTGAGTACTGGTATACGAG CAAGGCGAAATTTCGGACAGCGTTTCCATGGTAGTTTAGGCTTATCTCTAGCTAGTTTAT ATGAAAGATCTCCCAAGTCGAGTATAAATCTAATCCCTGGTATTTCTGCTGGTGTAAATA TCCAGTTGTTATCTCATGTACATGCACACTTGGAGTTACGTTGTCTCATGAACCCAGGTA TATCGAGTGAATTGTTCTTTGCTTCTGCTGACGGTGAGTATAATGCACGGATTTCAAGTA AACTTAACGCATCTGGTTATGCAAGCCTTTCCCTGATACTGGAAAAGTCCGTCTCATGGA CTTGGTTGAATCCACCTCGAGGATCTGGTGTAATTGATAAGGAAAATGTTCCTCAACCTG ATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAGTAAAGGCA ATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCTAGGTGCAC AATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAG GTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTT TATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCAT TTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCAC AAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTGGCCAGAAAACGTCGTGAAGCCTTGT CCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTT CTGGTCTTGTCATCGATCAAGCAA



consensusID : consensus_10980#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1161
fasta sequence
                              [CCCCTCGAGGCCATAATTCGGCACGAGGTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTG-GCC-AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG-AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCCAGCGATTACCTCTGTTGATTNTGATTGTAGATAAAAGTATGCTATTCTGAA-ATATATCTCACAATTCATTGTAATGAAATTGGACATCTGTCGATTTTGATTTCATG-TTTATGCCAGGTANNCTG-ACAGTTATTAAAGGATGCTCATAGATGAAACATTTAATCTTGTCCATATTTCGTAAATTACTCATGAATTGCTATGTTGGTTTCAAGAGGGAATTAGTTCAAATAA]

[+] EMBL CD082727             [CCCCTCGAGGCCATAATTCGGCACGAGGTCTAGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATTAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAG AAATCCACGTCAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD184740             [                                                                                                                                                                                                                                                                  CTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAGAAAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCACATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD080180             [                                                                                                                                                                                                                                                                             AAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAA AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTATAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTCTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCGCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGACAGCATTTAATCCCAGCGATTACCTCTGTTGATTNTGATTGTAGATAAAAGTATGCTATTCTGAA ATATATCTCACAATTCATTGTAATGAAATTGGACATCTGTCGATTTTGATTTCATG TTTATGCCAGGTANNCTG ACAGTTATTAAAGGATGCTCATAGATGAAACATTTAATCTTGTCCATATTTCGTAAATTACTCATGAATTGCTATGTTGGTTTCAAGAGGGAATTAGTTCAAATAA]
[+] EMBL CD197072             [                                                                                                                                                                                                                                                                                                       ttAGCTATGCAAAGAACTGTGCCTAGAAAACGTCTTGAATGTTAAAACTCTCGCGAACTCATGAGGAGAGCTGCATCACGAATTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD196396             [                                                                                                                                                                                                                                                                                                               GCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTTTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAAC                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD140648             [                                                                                                                                                                                                                                                                                                               GCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTGTATCTGATGTTGGTGGTCCGCTTGCATCTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAA TATCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD140501             [                                                                                                                                                                                                                                                                                                               GCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCACACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD140561             [                                                                                                                                                                                                                                                                                                               GCGAAGAACTG GCC AGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD197096             [                                                                                                                                                                                                                                                                                                                                                     accCTCGCGAGCTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAGCAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTATATCTGATGTTGGTGGTCCGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD140508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTGACTATACCCCTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAA TATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAGTCCC                                                                                                                                                                                                                                          ]
[-] EMBL CD076318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTA AAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCGCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCCAGTGATTACCTCTGTTGATTTTGTTTGTAGATAAAATAATTTTATTCTGAATATAT TTTCACAATTCATTGTAATGAAATTGGACATCTGTTGATTTTGATTT ATGTTTTATGCCAGGTA GCTGTACAGTTATTAAAGAATGTTCATAGATG                                                                               ]
[-] EMBL CD140562             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCAGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAA TATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTACTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATCTAATCCC                                                                                                                                                                                                                                          ]
[-] EMBL CD140633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGCTATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAA TATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCC                                                                                                                                                                                                                                          ]
[-] EMBL CD197102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATGATAG AAAAAAGTCACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAGAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCGCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCC                                                                                                                                                                                                                                          ]
[-] EMBL CD196492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTTACGCTTACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCGCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCC                                                                                                                                                                                                                                          ]
[-] EMBL CD140573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAA TATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTTTAATCGTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCC                                                                                                                                                                                                                                          ]
[-] EMBL CD140449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTTTCTATGACCCCTGTGTTGGTCTGTTAGAAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAATTCCTGTAAAA TATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGCAACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTCTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCTTGCACTCTTAAAATGAAAGCATTTAATCCC                                                                                                                                                                                                                                          ]
[+] EMBL SMAA69230            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTTAATTCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTACGGCGAGCAACATTTCGTAGAAACCTTGAAGTATGGGACTGTTGCGCATTGTTGTCATTACTCTATTTTAAT                                                                                                                                                                                                                                                                                                                                ]


>consensus_10980#1 CCCCTCGAGGCCATAATTCGGCACGAGGTCTAGGTGCACAATGTCAAATTTCCGCTCATT CTAGAATCTCTGGTCAGATTCGTCTAAGCATTCAAAAAGGTGTAACTGTTAAACTTAGTC TTTTACGAGGTACCCAAACATATTCTTTTCCTTTCATTTTATCTGATCGCCCTGACAGAG TTGCTCTGGGTTACGGTTTGATTTTCCCTATACTTGCATTTTCGGCTATTCGCATGTTGG TCTATGAACCTTATCTATCTCGTCAGTTAAAACTTGCACAAAAGTCCCGAAGAGCTAAGC TACGCGAAGAACTGGCCAGAAAACGTCGTGAAGCCTTGTCCACTCAAGAACTCATGAGGA GAGCTGCATCACGAAGTAAACGAAATGAAATGTCCATTTCTGGTCTTGTCATCGATCAAG CAATATATGGTTGTCTTTCACCGACCTCTGATCCCACTACTTTATCTGATGTTGGTGGTC CGCTTGCATTTGATGTGACTATACCCCTTCAGGCTATGATAGAAAAAAGTCACTTACGCT TACCACCTGGTCGATGGTGTGATATTCAAGGTTTCTATGACCCCTGTGTTGGTCTGTTAG AAAATCCACGTCAACTTCATCTGTCATATACTTTCCATAATTCCTCTCACGAGGTCACTG TCAATGAAAATCAAGGTCTAGCTATCCCAATGTCCAAGCATAAAGTTGAAATTCCTTAAT TCCTGTAAAATTATCTCCGAGTTGTCTTTCAAATTAGTTAACATATTATGTTCGCCGTGC AACATTTCGTAGAAACCTTGAAGTATTTCACTGTTGCACATTGTTGTCATTACTCTATTT TAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTATTAGAACCT TGCACTCTTAAAATGAAAGCATTTAATCCCAGCGATTACCTCTGTTGATTNTGATTGTAG ATAAAAGTATGCTATTCTGAAATATATCTCACAATTCATTGTAATGAAATTGGACATCTG TCGATTTTGATTTCATGTTTATGCCAGGTANNCTGACAGTTATTAAAGGATGCTCATAGA TGAAACATTTAATCTTGTCCATATTTCGTAAATTACTCATGAATTGCTATGTTGGTTTCA AGAGGGAATTAGTTCAAATAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10980#0      CTGAACAACGTGCTATTTATGATAGTTTTGGTTATAAAGGGTTGCAAATGCAAGGGTGGC 60
consensus_10980#1      ---------------------CCCCTCGAGGCCATAATTCGGCACGAG-GTCTAGGTGCA 38
                                                *   **  ****   *   * *  *    ****  

consensus_10980#0      AAATAACGAGTTCTCAAAAATCAGCACCTGAACTTCGTCTGGAATATCTTCTTTTGAAAG 120
consensus_10980#1      CAATGTCAAATTTCCGCTCATT----CTAGAATCTCTGGTCAGAT-TCGTCTAAGCATTC 93
                        ***  * * **  *    **     *  ***  **   *   ** ** ***    *   

consensus_10980#0      AAAAAGCTCGAGTTTCAAAGCAACTTCAATTGACACAACCAACCTCAGAATTTTCTCTTG 180
consensus_10980#1      AAAAAGGTGTAACTGTTA---AACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTC 150
                       ****** *  *  *   *   *****    *   ** *   ***  *  ** **** ** 

consensus_10980#0      GCTTAGATTTAACGGATGTTTTTGATCGTTATTTGAAGGAGCCACCAGAAGATCGTTCAT 240
consensus_10980#1      CTTTCATTTTATCTGATCGCCCTGA-CAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCT 209
                         **   **** * ***     *** *    **     * *  **     ***  * * *

consensus_10980#0      -TGATTCCAATTCCATCAATTTATGAGCTT-TCTGTTG-CTCAATCTATCAAT---GCTG 294
consensus_10980#1      ATACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTCGTCAGTTA 269
                        *  ** ** ** *  * ***     * *  *** *   *   *******      * * 

consensus_10980#0      GTATCAGCATAAAAAACTCAGTAAGTTTAGCTGGTCAGGTGACAGCCCACAA--CGGAGT 352
consensus_10980#1      AAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTGGCCAGAAAACGTCGT 329
                         *   *** ****  * *    ** * ****   *     ** * *** **  **  **

consensus_10980#0      AGGAATAGGGACATTTCTTGCTATATGGCGGCATCACTGCTCCAGAAAGTCAATTTTCGG 412
consensus_10980#1      GAAGCCTTGTCCACTCAAGAACTCATGAGGAGA--GCTGCATCACGAAGTAAA------- 380
                               *  ** *         ***  *  *   ****  **  **** **       

consensus_10980#0      CCCAACTACAATCGATACTGAGTTTTCTTACGGTCGTGCTGGTCGTGGATTGAGTACTGG 472
consensus_10980#1      -CGAAATGAAAT----GTCCATTTCTGGTCTTGTCAT--CGATCAAGCAATATATGGTTG 433
                        * ** *  ***        * ** *  *   *** *   * **  * * *   *  * *

consensus_10980#0      TATACGAGCAAGGCGAAATTTCGGACAGCGTTTCCATGGTAGTTTAGGCTTATCTCTAGC 532
consensus_10980#1      TCTTTCACCGACCTCTGATCCC--ACTAC-TTTATCTGATGTTGGTGGTCCGCTTGCATT 490
                       * *   * * *      **  *  **  * ***   ** *  *   **      *  *  

consensus_10980#0      TAGTTTATATGAAAGATCTCCCAAGTCGAGTATAAATCTAATCCCTGGTATTTCTGCTGG 592
consensus_10980#1      TGATGTGACT---ATACCCCTTCAGGCTATGATAGAAAAAAGTC-----ACTTACGCTTA 542
                       *  * *   *   * * * *   ** * *  *** *   **  *     * **  ***  

consensus_10980#0      TGTAAATATCCAGTTGTTATCTCATGTACATGCACACTTGGAGTTACGTTGTCTCATGAA 652
consensus_10980#1      C-----CACCTGGTCGATG----GTGTG-----ATATTCAAGGTTTCTATGACCCCTGTG 588
                              * *  ** * *      ***      * * *    *** *  ** * * **  

consensus_10980#0      CCCAGGTATATCGAGTGAATTGTTCTTTGCTTCTGCTGACGGTGAGTATAATGCACGGAT 712
consensus_10980#1      TT--GGTCTGTT-AGAAAATCCACGTCAACTTCATCTGTC-----ATATACTTTCCATAA 640
                           *** * *  **  ***     *   ****  *** *      **** *   *  * 

consensus_10980#0      TTCAAGTAAACTTAACGCATCTGGTTATGCAAGCCTTTCCCTGATACTGGAAAAGTCCGT 772
consensus_10980#1      TTCCTCT---CACGAGGTCACTGTCAATGAAAATCAAGGTCTAGCTATCCCAATGTCC-- 695
                       ***   *   *   * *   ***   *** **  *     **     *   ** ****  

consensus_10980#0      CTCATGGACTTGGTTGAATCCACCTCGAGGATCTGGTGTAATTGATAAGGAAAATGTTCC 832
consensus_10980#1      ---AAGCATAAAGTTGAAATTCCTT---AATTCCTGTAAAATT-ATCTCCGAGTTGTCTT 748
                          * * *    ******    * *      **  **  **** **     *  ***   

consensus_10980#0      TCAACCTGATTGTGAATGGGCTGATTCTGATAATTGTGATTTGGAACAACAGCGACGCAG 892
consensus_10980#1      TCAAATTAGTTA-------ACATATTATGTTCGCCGTG--------CAACATTT-CGTAG 792
                       ****  *  **         *  *** ** *    ***        *****    ** **

consensus_10980#0      TAAAGGCAATATATCATGCACCATCGGTGTTAACACAACAGACATTGGTGAATTCACTCT 952
consensus_10980#1      AAACCTTGAAGTATT--------TCACTGTTGC--------ACATTGTTGTCATTACTCT 836
                        **     *  ***         **  ****          ****** **   * *****

consensus_10980#0      AGGTGCACAATGTCAAATTTCCGCTCATTCTAGAATCTCTGGTCAGATTCGTCTAAGCAT 1012
consensus_10980#1      ATTTTAATCCTACCGTTTTTTCATTTTGTTTGGAAATTGAGCTCAACACTGTCTA----- 891
                       *  *  *   *  *   *** *  *   * * ***  *  * ***     *****     

consensus_10980#0      TCAAAAAGGTGTAACTGTTAAACTTAGTCTTTTACGAGGTACCCAAACATATTCTTTTCC 1072
consensus_10980#1      TTAGAACCTTGCACTCTTAAAATGAAAGCATTTA------ATCCCAGCGATTACCTCTG- 944
                       * * **   ** *    * ***   *  * ****      * ** * *   * * * *  

consensus_10980#0      TTTCATTTTATCTGATCGCCCTGACAGAGTTGCTCTGGGTTACGGTTTGATTTTCCCTAT 1132
consensus_10980#1      -TTGATTNTGATTG-TAGATAAAAGTATGCTATTCTGAAATATATCTCACAATTCATTGT 1002
                        ** *** *   ** * *     *    * *  ****   **    *     ***  * *

consensus_10980#0      ACTTGCATTTTCGGCTATTCGCATGTTGGTCTATGAACCTTATCTATCTC--GTCAGTTA 1190
consensus_10980#1      AATGAAATT---GGACATC----TGTCGATTTTGATTTCATGTTTATGCCAGGTANNCTG 1055
                       * *   ***   **  **     *** * * *      * * * ***  *  **    * 

consensus_10980#0      AAACTTGCACAAAAGTCCCGAAGAGCTAAGCTACGCGAAGAACTGGCCAGAAAACGTCGT 1250
consensus_10980#1      ACAGTTATTAAAGGATGCTCATAGATGAA---ACATTTAATCTTGTCCATA---TTTCGT 1109
                       * * **    **   * *  *      **   **    *    ** *** *     ****

consensus_10980#0      GAAGCCTTGTCCACTCAAGAACTCATGAGGAGAGCTGCATCACGAAGTAAACGAAATGAA 1310
consensus_10980#1      AAA-------TTACTCATGAATTGCTATGTTGGTTTCAAGAGGGAATTAGTTCAAATAA- 1161
                        **         ***** *** *  *  *  *   *  *    *** **    **** * 

consensus_10980#0      ATGTCCATTTCTGGTCTTGTCATCGATCAAGCAA 1344
consensus_10980#1      ----------------------------------
                                                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)