These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10985#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1120 fasta sequence [CTGAATCAGACAGCGTCTGACACCGTCACCACGAATCTCGAATGTAGTGACATCAGCATAGTAATATTTCAACTGGATTGTTGCACGAATAACCTAAAATGATGCACACATTTGCATGATTGACTCTGTTGGAACATGTATCCAAGTCACATGAGACGAATCAGTTTCATTCAAACTACCAATACAAACCGGATTTGGCTGATTGACGCGAATGATCTGTGAGTAGTAATAATACTGACAATAGGTATGTGTATTAACATCTGACTGATCACTTTCATATCGATATGAATCACTTTCGAGAAATACGCTTTCTTCATTCTCCACATCAGGTTGTTTACAATTGTCATTGCAGTTGAAGAATTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCTATAGACTAGTCGAAAATGTATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGGAAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAAAGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATCATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTATTGATAAACTGGTGATGCTCTATACTTCGATCTTTTGT-ACACAATCATTATGAACTTGTCATTGTANAGTGTGATGACCAAAGTATCGAGAAGAGATTCT] [+] EMBL CD082855 [CTGAATCAGACAGCGTCTGACACCGTCACCACGAATCTCGAATGTAGTGACATCAGCATAGTAATATTTCAACTGGATTGTTGCACGAATAACCTAAAATGATGCACACATTTGCATGATTGACTCTGTTGGAACATGTATCCAAGTCACATGAGACGAATCAGTTTCATTCAAACTACCAATACAAACCGGATTTGGCTGATTGACGCGAATGATCTGTGAGTAGTAATAATACTGACAATAGGTATGTGTATTAACATCTGACTGATCACTTTCATATCGATATGAATCACTTTCGAGAAATACGCTTTCTTCATTCTCCACATCAGGTTGTTTACAATTGTCATTGCAGTTGAAGAATTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCTATAGACTAGTCGAAAATGTATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGGAAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAAAGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGT ] [+] EMBL CD081945 [ GCAGTTGAAGAATTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCGATAGACTAGTCGAAAATGTATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGGAAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAAAGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATCATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTATTGATAAACTGGTGATGCTCTATACTTCGATCTTTTGT ACACAATCATTATGAACTTGTCATTGTANAGTGTGATGACCAAAGTATCGAGAAGAGATTCT] [-] EMBL CD076441 [ GCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATCATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTATTGATAAACTGTTGATGCTCTATACTTCGATC TTTGTAACACAATCATTATGAACTTGTCATTGTAGAGTGTGATGACGAAGTTATCGAGAAGAGATTC ] [-] EMBL CD118931 [ ATTTCGCAAGTACATTTGCTGTCACGTGGTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCATGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACACGAAATATTCCACGCTACAATTGGATTCCAATACTTGAACAGCTACTGTATTCCATATGTATGAAATGACAAACACTTACATTCACATTACTATACACAGTCTCTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACAGTGAACATTTGAACAATTGATGTCCAACAA ] [+] EMBL CD118954 [ aagcacATTTGCTGTCACGTGGTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCATGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATAACAATCCACATCGGTTTAATTCTACTCACACGAAATATTCCACGCTACAATTGGATTCCAATACTTGAACAGCTACTGTATTCCATATGTATGAAATGACAAACACTTACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACAGTGAACATTTGAACAATTGATGTCCAACA ] consensusID : consensus_10985#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 692 fasta sequence [ACGTTTGTTATTTTTAAATGTCATATTGATCATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTGACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC-ACTATTGATAAACTGTTGATTTCCAG-CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG-----TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCATTATTATGACTATG] [+] EMBL CD149354 [ACGTTTGTTATTTTTAAATGTCATATTGATCATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTGACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAA ] [+] EMBL CD149317 [ACCTTTGTTATTTTTAAATGTCATATTGATCATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTGACTTCCATTGATTGTCGCTCATTGTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGCTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATTCACATTACTATACACAGTCTGTAATCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAG ] [-] EMBL CD149590 [ TGTATTGACGTGCTGACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCCTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGATACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATACCAAACAATAACATTCGCATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTAAACAATAGGAGTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCC ] [+] EMBL CD157248 [ ATAGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAAACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATCACTTCATTATTCAAGTCAACAATGTTCTGTAGGTTTGTCTATTTCGGTACACAATAGGACTACAACTATTGATAAACTGTT ] [-] EMBL CD149569 [ GGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTAAACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGctg ] [+] EMBL CD137211 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATNTGCATTATTATTGCTATTATCA ] [+] EMBL CD136742 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCA ] [+] EMBL CD137171 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCGCAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCA ] [+] EMBL CD112403 [ TATCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATCTGTGTAA ] [-] EMBL CD137037 [ ATCAAACACTAACATTCACATTACTATACACAGTTTGAAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAATTCTACAGTGAACATCTGAACAATTGATGTTCAAC ATCAATGATTCGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCAT ] [-] EMBL CD145581 [ CGTATTACTTCATTATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTATATTCACAACATCTCTATCACTGCATG TTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCATTATTATGACTATG] [-] EMBL CD089785 [ CAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAGACGATGTC ] [-] EMBL CD137080 [ TCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGCCAACAGAATTACATTCACAACATCTCTATCACTGCATGTTCCATTCACATGACCG ] [-] EMBL CD137014 [ TCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGT ATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTACATTCACAACATCTCTATCACTGCATGTTCCATTCACATGACCG ] [-] EMBL CD136512 [ TCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTAC ACTATTGATAAACTGTTGATTTCCAG CAATGTCGCACCTCATTCGATTTGTGTAATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGAATTACATTCACAACATCTCTATCACTGCATGTTCTATTCACATGACCGTTTCTTCACTATGATTAACGTTACTTTg ] consensusID : consensus_10985#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 536 fasta sequence [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG-TGTAATCAACTCCACCACCGATTCTCAGTTTACATATTCATCTCC] [+] EMBL CD169342 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAACGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAACTCCACCACCGATTCTCAGTTTACATA ] [+] EMBL CD168917 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCCGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAACTCCACCACCGATTCTCAGTTTACATA ] [+] EMBL CD169512 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTAAACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAACTCCACCACCGATTCTCAGTTTACATA ] [+] EMBL CD169343 [GACTGTTCTATTTGAATTTGAAATTGAACAATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTGACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGAGTCCTGATGACACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGGCGTCAACATTTTCATCATCGAATTACTATGCGAAATTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTC ] [-] EMBL CD168878 [ CATTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTGAATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAATTTTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTG TGTAATCAAGTCCACCACCGATTCTCAGTTTACATAT ] [-] EMBL CD150299 [ CTTGAACAGCTAGTGTATTCCATATGTGTGAAATACCAAACACTAACATTCACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTACGCGAAATTCTACTGTAAACATATGAACAATTGATGTCCAACAATCAAATGATTCGTTCCACTTAATTATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGAGTACTCTATTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTGAGGTAACTATATCCACCACCGATTCTCAGTTTACATATTCATCTCC] consensusID : consensus_10985#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 134 fasta sequence [GACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATTCAATCGAATGGAAATTTGTACGAGGGACGTTATTTGA] [+] EMBL CD195323 [GACACGCGTTGAAGTTGTATGGACGTGCTGACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAAACTCATTCAATCGAATGGAAATTTGTACGAGGGACGTTATTTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10985#0 CTGAATCAGACAGCGTCTGACACCGTCACCACGAATCTCGAATGTAGTGACATCAGCATA 60 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 GTAATATTTCAACTGGATTGTTGCACGAATAACCTAAAATGATGCACACATTTGCATGAT 120 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 TGACTCTGTTGGAACATGTATCCAAGTCACATGAGACGAATCAGTTTCATTCAAACTACC 180 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 AATACAAACCGGATTTGGCTGATTGACGCGAATGATCTGTGAGTAGTAATAATACTGACA 240 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 ATAGGTATGTGTATTAACATCTGACTGATCACTTTCATATCGATATGAATCACTTTCGAG 300 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 AAATACGCTTTCTTCATTCTCCACATCAGGTTGTTTACAATTGTCATTGCAGTTGAAGAA 360 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 TTTGTAGGGCCAAACGAAGATCAGATAGATTGATATCCAGCTATAGACTAGTCGAAAATG 420 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 TATATCTCGAATGGTTGAAATGAACAAAACACAGTTATCTCATCTCATTCAATCGAATGG 480 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 AAATTTGTACGACACACTTATTTGATGTATAGTGTTACTAGATAATCACCTGTTAAGGAA 540 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ------------------------------------------------------------ consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 AGAGGCGACACACAGTCAGAGGAATGCCTACGTCTGTTCTTTCTGAATGTGTAATTGATC 600 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 -----------------------------ACGTTTGTTATTTTTAAATGTCATATTGATC 31 consensus_10985#2 -------------------------------GACTGTTCTATTTGAATTTGAAATTGAAC 29 consensus_10985#0 ATTTGTGAGGATTTTGCAAGTGGATTTGTTGACACGCGTTGAAGTTGTATGGACGTGCTG 660 consensus_10985#3 ------------------------------GACACGCGTTGAAGTTGTATGGACGTGCTG 30 consensus_10985#1 ATTTGTGAAGATCCTGCTAGTGGATTTGTTGTCACTTGGTGTAGTTGTATTGACGTGCTG 91 consensus_10985#2 AATTGTGAGGAATCTGCTCGTGGATTGGTTATCATGTGGTGAAGTTGTATTGACGTACTG 89 ** * ** ******** ***** *** consensus_10985#0 ACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAA 720 consensus_10985#3 ACTTCCATTGATTGTTGTTTATTTTCCTTGATAACTCTTGCCACACAGTGTCCTGATTAA 90 consensus_10985#1 ACTTCCATTGATTGTCGTTCATTTTCCATGATAACTCTTGCCACACATTGTCCTGATCAA 151 consensus_10985#2 ACTTCCATTGATTGTCGTTCATTTTCCAAGATAATTCATGTCAGA----GTCCTGATGAC 145 *************** *** ******* ***** ** ** ** * ******** * consensus_10985#0 ACTCATAACAATCCACATCGGTTTAATTCTACTCACATGAAATATTCCACGCTACAAGTG 780 consensus_10985#3 ACTCATT-CAATCGAATGGAAATTTGTACGAGGGACGT----TATTTGA----------- 134 consensus_10985#1 ACTCATAACAATCCACACTGGTTCACTTCAACTCACATGAAATATTCCACGCTACAAGTG 211 consensus_10985#2 ACTCATATCAATCCACACCGGTTCATTTCAACTCACATGAAATATTCCACGCTACAAGTG 205 ****** ***** * * * * * ** * **** * consensus_10985#0 AATTCCAATACTTGAACAGCTGCTGTATTCCATATGTGTGAAATGACAAACACTTACATT 840 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 AATTCCAATACTTGAACAGCTACTGTATCCCATATGTGTGAAATATCAAACACTAACATT 271 consensus_10985#2 AATTCCAATACTTGAACAGCTACTGTATTCCATATGTGTGAAATACCAAACACTAACATT 265 consensus_10985#0 CACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAA 900 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 CACATTACTATACACAGTCTGTAGTCGTCAACATTTTCACCATTGAATTATTATGCGAAA 331 consensus_10985#2 CACATTACTATACACAGTCTGTAGTCGTCAACATTTTCATCATCGAATTACTATGCGAAA 325 consensus_10985#0 TTCTACTATGAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTGTTAATTAAT 960 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 TTCTACAGTGAACATCTGAACAATTGATGTTCAACAATCAA-TGATTCGTATTACTTCAT 390 consensus_10985#2 TTCTACTGTAAACATCTGAACAATTGATGTCCAACAATCAAATGATTCGTTCTACTTAAT 385 consensus_10985#0 TATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAACCGGACTACACTA 1020 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 TATTCAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACACTA 450 consensus_10985#2 TATTGAAATCAACAATGTTCTGTTGGTTTGTCTATTTCGGTACACAATAGGACTACTCTA 445 consensus_10985#0 TTGATAAACTGGTGATGCTCTATACT-TCGATCTTTTGTACACAATCATTATGAACTTGT 1079 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 TTGATAAACTGTTGATTTCCAGCAATGTCGCACCTCATTCGATTTGTGTAATTAACTCCA 510 consensus_10985#2 TTGATAAAATGTTGATTTTCAGCAATGTCGCACCTCATTCGATTTGTGTAATCAACTCCA 505 consensus_10985#0 CATTGTANAGTGTGATGACCAAAGTATCGAGAAGAGATTCT------------------- 1120 consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 CCACCGATTCTCAGTTTACATATTCATCTCCCTCTCAATCCACATTCACTTGTCAACAGA 570 consensus_10985#2 CCACCGATTCTCAGTTTACATATTCATCTCC----------------------------- 536 consensus_10985#0 ------------------------------------------------------------ consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ATTATATTCACAACATCTCTATCACTGCATGTTCACATGACCGTTTCTTCACTATGATTA 630 consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 ------------------------------------------------------------ consensus_10985#3 ------------------------------------------------------------ consensus_10985#1 ACGTTACTTTTAATACCATTCGTATTTGCATTATTATTGCTATTATCATTATTATGACTA 690 consensus_10985#2 ------------------------------------------------------------ consensus_10985#0 -- consensus_10985#3 -- consensus_10985#1 TG 692 consensus_10985#2 -- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||