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Schistosoma mansoni
cluster # 10997 cluster # 10997       Sequences # 28       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10997#0 length = 1504 sequences # 9  
consensus_10997#1 length = 663 sequences # 4  
consensus_10997#2 length = 570 sequences # 3  
consensus_10997#3 length = 447 sequences # 1  
consensus_10997#4 length = 437 sequences # 9  
consensus_10997#5 length = 412 sequences # 2  

consensusID : consensus_10997#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1504
fasta sequence
                              [GAAAATTATTTATT-GTTGCCTTGATAAAATATACACAACAGCACTTGAAATGCGGGGTGACCTCTTTCATTGAATGTGGTAATTCAGAGGAAGTATATAAAAAAAATACAAGGATGGTCATCGATACTTCACATCTTATAAATTAAGAGTAGTGGTGATATCTGAATGTATGAATATGGATCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACGATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATTAGACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCACTGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTTGTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATAGTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCGAATGTTGATGTAATAATCCCGAGAA-GTGAAGTCTGTACTAGAACGACGAAGAGAAAATCGATCCATAATACGCGATAATTGTACCCGAACGTTGTCGGCAGATTTTAATGAGCGAAAATTTATGAAATTATCGTAACACCACTGTGGATCTTCATGATTTTGTTTGAAGGCATGATATACATTTAACATAGTTAAGTGGTCACCATCAATGTGAGCGAAACGCATTTTGGCTTCGTCTGCGGTTTTCTTGGAGTCGGCAGGGCGTACAAAACATTGAGGTACTGATAACATTGAAGTGATGCTCAGAATTTCATTTGAACAGTTGTAATCGCAAGAGGCAATAACCATTTTGGCTAATTGGGGATCAAGTGGGAACTCAGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTATTATATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAACAATGATTAAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTACACCGAAGCTTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGGTATCATAAAATATGCAGATTTCTAGACTATGTATATTACAATACTAGACTGAGAAGTGTTGGCAAAAATAGACTATAGTGACCAATATTTGTAGAAATCAGTGTACAAAAATTCATTTAGTGTAGTGTTAATAAGTGACATTCTAATTGGACGGACGGTGTACAAGATACAACTCTTATCCCCCATTTTAATTACACTCGTAATCCTTTAATAATTACAAAAATTGATTCATTTTACCTAAATTTTGAGACAAA]

[+] EMBL CD074415             [GAAAATTATTTATT GTTGCCTTGATAAAATATACACAACAGCACTTGAAATGCGGGGTGACCTCTTTCATTGAATGTGGTAATTCAGAGGAAGTATATAAAAAAAATACAAGGATGGTCATCGATACTTCACATCTTATAAATTAAGAGTAGTGGTGATATCTGAATGTATGAATATGGATCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACGATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATTAGACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCACTGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTTGTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATAGTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCGAATGTTGATGTAATAATCCCGAGAA GTGAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD073240             [GAAAATTATTTATT GTTGCCTTGATAAAATATACACAACAGCACTTGAAATGCGGGGTGACCTCTTTCATTGAATGTGGTAATTCAGAGGAAGTATATAAAAAAAATACAAGGATGGTCATCGATACTTCACATCTTATAAATTAAGAGTAGTGGTGATATCTGAATGTATGAATATGGATCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACGATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATTAGACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCACTGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTTGTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATAGTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCGAATGTTGATGTAATAATCCCGAGAA GTGAAGTCTGTACTAGAACGACGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD076119             [    ATTATTTATTGGTTGCCTTGATAAAATATACACAACAGCACTTGAAATGCGGGGTGACCTCTTTCATTGAATGTGGTAATTCAGAGGAAGTATATAAAAAAAATACAAGGATGGTCATCGATACTTCACATCTTATAAATTAAGAGTAGTGGTGATATCTGAATGTATGAATATGGATCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACGATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATTAGACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCACTGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTTGTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATAGTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCGAATGTTGATGTAATAATCCCGAGAA GTGAAGTCTGTACTAGAACGACGAAGAGAAAATCGATCCATAATACGCGATAATTGTACCCGAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD142328             [                                                                                                                                                                                  GGATCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACGATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATTAAACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCACTGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD080505             [                                                                                                                                                                                                                                                                                                                                GGAGCGATACGCACAAGCCAATCTGG TTTACTTCAGTCACTGTACGTATATAATTCTNTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTTGTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATAGTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCGAATGTTGATGTAATAATCCCGAGAA GTGAAGTCTGTACTAGAACGACGAAGAGAAAATCGATCCATAATACGCGATAATTGTACCCGAACGTTGTCGGCAGATTTTAATGAGCGAAAATTTATGAAATTATCGTAACACCACTGTGGATCTTCATGATTTTGTTTGAAGGCATGATATACATTTAGCATAGTTAAGTGGTCACCATCAATGTGAGCGAAACGCATTTTGGCTTCGTCTGCGGTTTTCTTGGAGTCGGCAGGGCGTACAAAACATTGAGGTACTGATAACATTGAAGTGATGCTCAGAATTTCATTTGAACAGTTGTAATCGCAAGAGGCAATAACCATTTTGGCTAATTGGGGATCAAGTGGGAACTCAGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD157985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCGAGAATGTGAAGTCTGTACTAGAACGACGATGAGAAAATCGATCCATAATACGCGATAATTGTACCCGAACGCTGTCGGCAGATTTTAATGAGCGAAAATTTATGAAGTTATCGTAACACCACTGTGGATCTTCATGATTTTGTTTGAAGGCATGATATACATTTAACATAGTTAAGTGGTCACCATCAATGTGAGCGAAACGCATTTTGGCTTCGTCTGCGG TTTCTTGGAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD157904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCGAGAG GTGAAGTCTGTACTAGAACGACGAAGAGAAAATCGATCCATAATACGCGATAATTGTACCCGAACGTTGTCGGCAGATTTTAATGAGCGAAATTTTATGAAATTATCGTAACACCACTGTGGATCTTCATGATTTTGTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD078780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTTCATGA TNTGTTNGAAGGCATGATATACATTTAACATAGTTAAGTGGTCACCATCAATGTGAGCGAAACGCATTTTGGCTTCGTCTGCGGTTTTCTTGGAGTCGGCAGGGCGTACAAAACATTGAGGTACTGATAACATTGAAGTGATGCTCAGAATTTCATTTGAACAGTTGTAATCGCAAGAGGCAATAACCATTTTGGCTAATTGGGGATCAAGTGGGAACTCAGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTATTATATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAACAATGATTAAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTACACCGAAGCTTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGGTATCATAAAATATGCAGATTTCTA                                                                                                                                                                                                                                      ]
[-] EMBL CD082524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGCAATAACCATTTTGGCTAA TGGGGATCAAGTGGGAACTCAGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTATTATATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAACAATGATTAAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTACACCGAAGCTTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGGTATCATAAAATATGCAGATTTCTAGACTATGTATATTACAATACTAGACTGAGAAGTGTTGGCAAAAATAGACTATAGTGACCAATATTTGTAGAAATCAGTGTACAAAAATTCATTTAGTGTAGTGTTAATAAGTGACATTCTAATTGGACGGACGGTGTACAAGATACAACTCTTATCCCCCATTTTAATTACACTCGTAATCCTTTAATAATTACAAAAATTGATTCATTTTACCTAAATTTTGAGACAAA]


>consensus_10997#0 GAAAATTATTTATTGTTGCCTTGATAAAATATACACAACAGCACTTGAAATGCGGGGTGA CCTCTTTCATTGAATGTGGTAATTCAGAGGAAGTATATAAAAAAAATACAAGGATGGTCA TCGATACTTCACATCTTATAAATTAAGAGTAGTGGTGATATCTGAATGTATGAATATGGA TCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACG ATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATT AGACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCAC TGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTT GTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATA GTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCG AATGTTGATGTAATAATCCCGAGAAGTGAAGTCTGTACTAGAACGACGAAGAGAAAATCG ATCCATAATACGCGATAATTGTACCCGAACGTTGTCGGCAGATTTTAATGAGCGAAAATT TATGAAATTATCGTAACACCACTGTGGATCTTCATGATTTTGTTTGAAGGCATGATATAC ATTTAACATAGTTAAGTGGTCACCATCAATGTGAGCGAAACGCATTTTGGCTTCGTCTGC GGTTTTCTTGGAGTCGGCAGGGCGTACAAAACATTGAGGTACTGATAACATTGAAGTGAT GCTCAGAATTTCATTTGAACAGTTGTAATCGCAAGAGGCAATAACCATTTTGGCTAATTG GGGATCAAGTGGGAACTCAGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATC AAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTATTAT ATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAACAATGATT AAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTACACCGAAGC TTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCCGGTAAAAC CAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGGTATCATAAAA TATGCAGATTTCTAGACTATGTATATTACAATACTAGACTGAGAAGTGTTGGCAAAAATA GACTATAGTGACCAATATTTGTAGAAATCAGTGTACAAAAATTCATTTAGTGTAGTGTTA ATAAGTGACATTCTAATTGGACGGACGGTGTACAAGATACAACTCTTATCCCCCATTTTA ATTACACTCGTAATCCTTTAATAATTACAAAAATTGATTCATTTTACCTAAATTTTGAGA CAAA



consensusID : consensus_10997#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 663
fasta sequence
                              [ATTTTGGCTAATTGGGGATCAAGTGGGAACTCTGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCGGGAGGATCCATAAAGTCAAAATGCACCAAATCATCAATCCCCAGCTTTTTCAACTGGAGGACAACAGTACCCAGGTTTGATCGAAGAATTTCTGGATATGTGTTCTCTTGCATCTCATTTGTATATGCCTTCTCTGTATACAATCTAAAACATTTTCCAGGTCTTGTACGCCCGGCCCTTCCGGCACGTTGTTGTGCAGAAGCCTTGCTGATAGCAGTGACTAAGAGAGATTCAACACGAATACGAGGATTGTAGACTTTTTGCTTTGCGAAACCTGGGTCAATAACAAAAACCACTCCATCAATTGTGAGGGATGTCTCTGCAATATTTGTGGACACCACAACCTTTCGACCGACAGCCCCATTTGCACGTTTTGGAGGAGGAGATTCAAAAATTCTTTGTTGAAGATTTGGTGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCACTACTTCTCTCTGGATNACGTTGCATGCTTTCTCAATCTCCTCTTGTCCCGTCAGAACAGAAA]

[+] EMBL CD140607             [ATTTTGGCTAATTGGGGATCAAGTGGGAACTCTGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCGGGAGGATCCATAAAGTCAAAATGCACCAAATCATCAATCCCCAGCTTTTTCAACTGGAGGACAACAGTACCCAGGTTTGATCGAAGAATTTCTGGATATGTGTTCTCTTGCATCTCATTTGTATATGCCTTCTCTGTATACAATCTAAAACATTTTCCAGGTCTTGTACGCCCGGCCCTTCCGGCACGTTGTTGTGCAGAAGCCTTGCTGATAGCAGTGACTAAGAGAGATTCAACACGAATACGAGGATTGTAGACTTTTTGCTTTGCGAAACCTGGGTCAATAACAAAAAACACTCCATCAATTGTGAG                                                                                                                                                                                                                               ]
[-] EMBL CD140430             [                                                                                                                                GGGAGGATCCATAAAGTCAAAATGCACCAAATCATCAATCCCCAGCTTTTTCAACTGGAGGACAACAGTACCCAGGTTTGATCGAAGAATTTCTGGATATGTGTTCTCTTGCATCTCATTTGTATATGCCTTTTCTGTATACAATCTAAAACATTTTCCAGGTCTTGTACGCCCGGCCCTTCCGGCACGTTGTTGTGCAGAAGCCTTGCTGATAGCAGTGACTAAGAGAGATTCAACACGAATACGAGGATTGTAGACTTTTTGCTTTGCGAAACCTGGGTCAATAACAAAAACCACTCCATCAATTGTGAGGGATGTCTCTGCAATATTTGTGGACACCACAACCTTTCGACCGACAGCCCCATTTGCACGTTTTGGAGGAGGAGATTCAAAAATTCTTTGTTGAAGATTTGGTGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCA                                                               ]
[-] EMBL CD140503             [                                                                                                                                                                CATCAATCCCCAGCTTTTTCAACTGGAGGACAACAGTACCCAGGTTTGATCGAAGAATTTCTGGATATGTGTTCTCTTGCATCTCATTTGTATATGCCTTCTCTGTATACAATCTAAAACATTTTCCAGGTCTTGTACGCCCGGCCCTTCCGGCACGTTGTTGTGCAGAAGCCTTGCTGATAGCAGTGACTAAGAGAGATTCAACACGAATACGAGGATTGTAGACTTTTTGCTTTGCGAAACCTGGGTCAATAACAAAAACCACTCCATCAATTGTGAGGGATGTCTCTGCAATATTTGTGGACACCACAACCTTTCGACCGACAGCCCCATTTGCACGTTTTGGAGGAGGAGATTCAAAAATTCTTTGTTGAAGATTTGGTGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCA                                                               ]
[+] EMBL CD158206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGATATCTCTGCAATATTTGTGGACACCACAACCTTTCGACCGACAGCCCCATTTGCACGTTTTGGAGGAGGAGATTCAAAAATTCTTTGTTGAAGATTTGGTGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACATCTACTTCTCTCTGGATNACGTTGCATGCTTTCTCAATCTCCTCTTGTCCCGTCAGAACAGAAA]


>consensus_10997#1 ATTTTGGCTAATTGGGGATCAAGTGGGAACTCTGCCATCATACTTCCTAGATCGGTTAGG TTACCATCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTT TCCGGAGCGGGAGGATCCATAAAGTCAAAATGCACCAAATCATCAATCCCCAGCTTTTTC AACTGGAGGACAACAGTACCCAGGTTTGATCGAAGAATTTCTGGATATGTGTTCTCTTGC ATCTCATTTGTATATGCCTTCTCTGTATACAATCTAAAACATTTTCCAGGTCTTGTACGC CCGGCCCTTCCGGCACGTTGTTGTGCAGAAGCCTTGCTGATAGCAGTGACTAAGAGAGAT TCAACACGAATACGAGGATTGTAGACTTTTTGCTTTGCGAAACCTGGGTCAATAACAAAA ACCACTCCATCAATTGTGAGGGATGTCTCTGCAATATTTGTGGACACCACAACCTTTCGA CCGACAGCCCCATTTGCACGTTTTGGAGGAGGAGATTCAAAAATTCTTTGTTGAAGATTT GGTGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCA CTACTTCTCTCTGGATNACGTTGCATGCTTTCTCAATCTCCTCTTGTCCCGTCAGAACAG AAA



consensusID : consensus_10997#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 570
fasta sequence
                              [AATTGATATCGGTGAATCTAAGCCCAGACGGTCAAGGTTTTCTGATGGACCAGGTAATCACTCACGTGATCGCTCGCGCTCCCCAGATAATCAGGTCAAACCTAAACAGAATGCTTCAAATAAGTCTCCAATCGCAGCACAAACAAATCCTTACAACGGCAAATCGTTTAGTGCCAAATACTTCGAACTTCTCAGGAAGCGTATCAAATTGCCTGTTTGGGAATACAAAGAGAATTTTTTTCAAACATTATCGGAGAACCAAGTCACCGTTTTAGTTGGTGAGACAGGTTCTGGAAAAACGACCCAAATTCCTCAATGGTGCCTGGAATGGGTAACTGGACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTAT]

[+] EMBL CD098369             [AATTGATATCGGTGAATCTAAGCCCAGACGGTCAAGGTTTTCTGATGGACCAGGTAATCACTCACGTGATCGCTCGCGCTCCCCAGATAATCAGGTCAAACCTAAACAGAATGCTTCAAATAAGTCTCCAATCGCAGCACAAACAAATCCTTACAACGGCAAATCGTTTAGTGCCAAATACTTCGAACTTCTCAGGAAGCGTATCAAATTGCCTGTTTGGGAATACAAAGAGAATTTTTTTCAAACATTATCGGAGAACCAAGTCACCGTTTTAGTTGGTGAGACAGGTTCTGGAAAAACGACCCAAATTCCTCAATGGTGCCTGGAA                                                                                                                                                                                                                                                  ]
[+] EMBL CD119583             [                           ACCGTCTAGGTTTTCTGATGGACCAGGTAATCACTCACGTGATCGCTCGCGCTCCCCAGATAATCAGGTCAAACCTAAACAGAATGCTTCAAATAAGTCTCCATTCGCAGCACAAACAAATCCTTACAACGGCAAATCGTTTAGTGCCAAATACTTCGAACTTCTCAGGAAGCGTATCAAATTGCCTGTTTGGGAATACAAAGAGAATTTTTTTCAAACATTATCGGAGAACCAAGTCACCGTTTTAGTTGGTGAGACAGGTTCTGGAAAAACGACCCAAATTCCTCAATGGTGCCTGG                                                                                                                                                                                                                                                    ]
[+] EMBL CD118528             [                                                                                                                                CACTCGCAGCACAAACAAATCCTTACAACGGCAAATCGTTTAGTGCCAAATACTTCGAACTTCTCAGGAAGCGTATCAAATTGCCTGTTTGGGAATACAAAGAGAATTTTTTTCAAACATTATCGGATAACCAAGTCACCGTTTTAGTTGGTGAGACAGGTTCTGGAAAAACGACCCAAATTCCTCAATGGTGCCTGGAATGGGTAACTGGACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTAT]


>consensus_10997#2 AATTGATATCGGTGAATCTAAGCCCAGACGGTCAAGGTTTTCTGATGGACCAGGTAATCA CTCACGTGATCGCTCGCGCTCCCCAGATAATCAGGTCAAACCTAAACAGAATGCTTCAAA TAAGTCTCCAATCGCAGCACAAACAAATCCTTACAACGGCAAATCGTTTAGTGCCAAATA CTTCGAACTTCTCAGGAAGCGTATCAAATTGCCTGTTTGGGAATACAAAGAGAATTTTTT TCAAACATTATCGGAGAACCAAGTCACCGTTTTAGTTGGTGAGACAGGTTCTGGAAAAAC GACCCAAATTCCTCAATGGTGCCTGGAATGGGTAACTGGACGGTATCCGACCAAAAAGGC AGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGA GGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCAC GTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTC TGATCCTTTGCTCGAGGCATACGGTGTTAT



consensusID : consensus_10997#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence
                              [TCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTATTATATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAACAATGATTAAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTACACCGAAGCTTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGCTCTGGAGTATAAAATATCTCCACTGGATGAGTTCTACCGGGCACGGTCATAAGAGGTGCTTTGTGAAAGTAATCCTGGGTCATTTCGAAAAGGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCA]

[-] EMBL CD140618             [TCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTATTATATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAACAATGATTAAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTACACCGAAGCTTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGCTCTGGAGTATAAAATATCTCCACTGGATGAGTTCTACCGGGCACGGTCATAAGAGGTGCTTTGTGAAAGTAATCCTGGGTCATTTCGAAAAGGGAAGGGTAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCA]


>consensus_10997#3 TCATCATCAAGGGCTGCCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGA GCTATTATATTCAACAAAAACTCATGATAAGAAAAATGGCATTGTAAACTTTTGGTGAAA CAATGATTAAATTAGCGACAGAAAAGAGCTGAGTCTTTCTGTTTCACAACTGTTATTTAC ACCGAAGCTTCTAAATACTAAGTGGAAAGAGAAATTTTATTAGCAAAACTCTATAACGCC GGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGTAGCGCAAAATCTACCTTCTGGCTC TGGAGTATAAAATATCTCCACTGGATGAGTTCTACCGGGCACGGTCATAAGAGGTGCTTT GTGAAAGTAATCCTGGGTCATTTCGAAAAGGGAAGGGTAGAGTAGAGAGGAATGCAACGG AGTTCACCAACGTCCGGGCCCAAACCA



consensusID : consensus_10997#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 437
fasta sequence
                              [ACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGTTGTCATGAGTGCGACTTTGGACGCTGGAAAATTTCAAATCTTAAAAGTATTTGTTTAGTTAAATGTATCCTAGTTGTATCACATTTTATTTGGAGTTGGATGAAGCCATC]

[+] EMBL CD198544             [ACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGTTGTCATGAGTGCGACTTTGGACGCTGGAAAATTTCAAATCTTAAAAGTATTTGTTTAGTTAAATGTATCCTAGTTGTATCACATTTTATTTGGAGTTGGATGAAGCCATC]
[+] EMBL CD198561             [ACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGTTGTCATGAGTGCGACTTTGGACGCTGGAAAATTTCCAATCTTAAAAGTATTTGTTTAGTT                                                  ]
[+] EMBL CD198529             [ACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAGATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGTTGTCATGAGTGCGACTTTGGACGCTGGAAAATTT                                                                            ]
[-] EMBL CD199431             [                                            GGGTCGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGCATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATGCGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGT                                                                                                              ]
[-] EMBL CD199440             [                                            ggtncGCAGCTATGTCTGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTTGAGGATTGCACGTCCTCAAGGACCGTGATGAAATATATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGT                                                                                                              ]
[+] EMBL CD096500             [                                                             GTTGCTCAACGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAATGGGACACACTATTCGATTCTAGGATTGCACGTCCTCAAGGACCGCGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGGTATTCTTTTGGACGAACCCCACGAAAGAACCTTGGGTACTGATATTTTAATGGGGCTACTTAAAGAAATCACAAAGCACAGATTAGATTTAAAAATAG                                                                                                               ]
[-] EMBL CD147249             [                                                              TTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAGATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGT                                                                                                              ]
[-] EMBL CD199388             [                                                              tcGCTCAGCGTGTATCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATGCGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGT                                                                                                              ]
[-] EMBL CD199447             [                                                              tgaCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAGTATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTATGCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATGCGGTGTTATTCTTTTGGACGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGT                                                                                                              ]


>consensus_10997#4 ACGGTATCCGACCAAAAAGGCAGTGGCTTGCACTCAGCCTAGACGGGTAGCAGCTATGTC TGTTGCTCAGCGTGTTTCCGAGGAAATGGATGTTGAACTTGGTCAAGAAGTGGGATACAG TATTCGATTCGAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACTGATGGTAT GCTTTTACGTGAAGGCATGTCTGATCCTTTGCTCGAGGCATACGGTGTTATTCTTTTGGA CGAAGCCCACGAAAGAACCTTGGCTACTGATATTTTAATGGGTCTACTTAAAGAAATCAC AAAGCAAAGATTAGATTTAAAAATAGTTGTCATGAGTGCGACTTTGGACGCTGGAAAATT TCAAATCTTAAAAGTATTTGTTTAGTTAAATGTATCCTAGTTGTATCACATTTTATTTGG AGTTGGATGAAGCCATC



consensusID : consensus_10997#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 412
fasta sequence
                              [TCACCAACGTCCGGGCCC-AACCATCTACTTCTCTCTGGATACGTTTGCATGCTTCTTCAATCTCCTCTTGTCCCGTCAGAAACAGTAATATGTCACCCTCGATCTCTTCGCACATATGAATCTGGATT-ACAGTACGGATAGCCGCTTCGAGATAATCACGTTCTGGCTCTGGAGTATAAAATATCTCCACTGGATGAGTTCTACCGGGCACGGTCATAAGAGGTGCTTTGTGAAAGTAATCTTGAAATTTTCCAGCGTCCAAAGTCGCACTCATGACAACTATTTTTAAATCTAATCTTTGCTTTGTGATTTCTTTAAGTAGACCCATTAAAATATCAGTAGCCAAGGTTCTTTCGTGGGCTTCGTCCAAAAGAATAACACCGTATGCCTCGAGCAAAGGATCAGACATGCC]

[+] EMBL CD198500             [TCACCAACGTCCGGGCCC AACCATCTACTTCTCTCTGGATACGTTTGCATGCTTCTTCAATCTCCTCTTGTCCCGTCAGAAACAGTAATATGTCACCCTCGATCTCTTCGCACATATGAATCTGGATT ACAGTACGGATAGCCGCTTCGAGATAATCACGTTCTGGCTCTGGAGTATAAAATATCTCCACTGGATGAGTTCTACCGGGCACGGTCATAAGAGGTGCTTTGTGAAAGTAATCTTGAAATTTTCCAGCGTCCAAAGTCGCACTCATGACAACTATTTTTAAATCTAATCTTTGCTTTGTGATTTCTTTAAGTAGACCCATTAAAATATCAGTAGCCAAGGTTCTTTCGTGGGCTTCGTCCAAAAGAATAACACCGTATGCCTCGAGCAAAGGATCAGACATGCC]
[+] EMBL CD142393             [TCACCAACGTCCGGGCCCAAACCATCTACTTCTCTCCGGATACGTTTGCATGCTTCTTCAATCTCCTCTTGGCCCGTCAGAAACAGCAATATGTCACCCTCGATCTCTTCGCACATATGAATCTGGATTGACAGTACGGATAGCCGCTTCGAGATAATCACGTTCTGACTCTGGAGTAT AAATATCTCCACTGG                                                                                                                                                                                                                           ]


>consensus_10997#5 TCACCAACGTCCGGGCCCAACCATCTACTTCTCTCTGGATACGTTTGCATGCTTCTTCAA TCTCCTCTTGTCCCGTCAGAAACAGTAATATGTCACCCTCGATCTCTTCGCACATATGAA TCTGGATTACAGTACGGATAGCCGCTTCGAGATAATCACGTTCTGGCTCTGGAGTATAAA ATATCTCCACTGGATGAGTTCTACCGGGCACGGTCATAAGAGGTGCTTTGTGAAAGTAAT CTTGAAATTTTCCAGCGTCCAAAGTCGCACTCATGACAACTATTTTTAAATCTAATCTTT GCTTTGTGATTTCTTTAAGTAGACCCATTAAAATATCAGTAGCCAAGGTTCTTTCGTGGG CTTCGTCCAAAAGAATAACACCGTATGCCTCGAGCAAAGGATCAGACATGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10997#0      GAAAATTATTTATTGTTGCCTTGATAAAATATACACAACAGCACTTGAAATGCGGGGTGA 60
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      CCTCTTTCATTGAATGTGGTAATTCAGAGGAAGTATATAAAAAAAATACAAGGATGGTCA 120
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      TCGATACTTCACATCTTATAAATTAAGAGTAGTGGTGATATCTGAATGTATGAATATGGA 180
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      TCAAGTTTGTGCTTGTAATTTCGGCTCTTGGTTTTGTTTTTGCTCTTGTTGAAGTTTACG 240
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      ATTTTGAATCCTGTGAACAATTCGTTCAAGTATCCGTCGAGCATCACAATCAGGGAAATT 300
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      AGACATATCATAATATTGAGGAGCGATACGCACAAGCCAATCTGGTTTTACTTCAGTCAC 360
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      TGTACGTATATAATTCTTTGTTGTAAGGACGAACTCATTGTATAACACCCATTCCGGTTT 420
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      GTGATCCATTACTGTAGAGGGGTGAAGCTGGACCACTTGATTGTCTTTTACAGTTAAATA 480
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      GTGTCCAGTACGTTCAAGATGAGCAACCTGCATGAAAAAACCAGATACTAAAGCTTTTCG 540
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      AATGTTGATGTAATAATCCCGAGAAGTGAAGTCTGTACTAGAACGACGAAGAGAAAATCG 600
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      ATCCATAATACGCGATAATTGTACCCGAACGTTGTCGGCAGATTTTAATGAGCGAAAATT 660
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      TATGAAATTATCGTAACACCACTGTGGATCTTCATGATTTTGTTTGAAGGCATGATATAC 720
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      -------------------------------------------------------AATTG 5
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      ATTTAACATAGTTAAGTGGTCACCATCAATGTGAGCGAAACGCATTTTGGCTTCGTCTGC 780
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      ATATCGGTGAATCTAAGCCCAGACGGTCAAGGTTTTCTGATGGACCAGGTAATCACTCAC 65
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      GGTTTTCTTGGAGTCGGCAGGGCGTACAAAACATTGAGGTACTGATAACATTGAAGTGAT 840
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      GTGATCGCTCGCGCTCCCCAGATAATCAGGTCAAACCTAAACAGAATGCTTCAAATAAGT 125
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ------------------------------------------------------------
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      GCTCAGAATTTCATTTGAACAGTTGTAATCGCAAGAGGCAATAACCATTTTGGCTAATTG 900
consensus_10997#3      ------------------------------------------------------------
consensus_10997#2      CTCCAATCGCAGCACAAACAAATCCTTACAACGGCAAATCGTTTAGTGCCAAATACTTCG 185
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      ----------------------------------------------ATTTTGGCTAATTG 14
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      GGGATCAAGTGGGAACTCAGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATC 960
consensus_10997#3      ----------------------------------------------------TCATCATC 8
consensus_10997#2      AACTTCTCAGGAAGCGTATCAAATTGCCTGTTTGGGAATACAAAGAGAATTTTTTTCAAA 245
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      GGGATCAAGTGGGAACTCTGCCATCATACTTCCTAGATCGGTTAGGTTACCATCATCATC 74
consensus_10997#5      -------------------------------------------------------TCACC 5
                                                                                   

consensus_10997#0      AAGGGCTG--CCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTA-- 1016
consensus_10997#3      AAGGGCTG--CCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCTA-- 64
consensus_10997#2      CATTATCG--GAGAACCAAGTCACCGTTTTAGTTGGTGAGACAGGTTCTGGAAAAACGAC 303
consensus_10997#4      ------------------------------------------------------------
consensus_10997#1      AAGGGCTG--CCAAATAATTCAATAACTCTAGAGCACGCATCAGAGTTTCCGGAGCGGGA 132
consensus_10997#5      AACGTCCGGGCCCAACCATCTACTTCTCTCTGGATACGTTTGCATGCTTCTTCAATCTCC 65
                                                                                   

consensus_10997#0      TTAT--ATTCAACAAAAACTCATGATAAGAAAAAT----GGCATTGTAAACTTTTGGTGA 1070
consensus_10997#3      TTAT--ATTCAACAAAAACTCATGATAAGAAAAAT----GGCATTGTAAACTTTTGGTGA 118
consensus_10997#2      CCAA--ATTCCTCAATGGTGCCTGGAATGGGTAAC----TGGACGGTATCCGACCAAAAA 357
consensus_10997#4      ------------------------------------------ACGGTATCCGACCAAAAA 18
consensus_10997#1      GGATCCATAAAGTCAAAATGCACCAAATCATCAATCCCCAGCTTTTTCAACTGGAGG-AC 191
consensus_10997#5      TCTT--GTCCCGTCAGAAACAGTAATATG-TCACCCTCGATCTCTTCGCACATATGAATC 122
                                                                         *         

consensus_10997#0      AACAATGA-TTAAATTAGCGACAGAAA----AGAGCTGAGTCTTTCTGTTTCACAACTGT 1125
consensus_10997#3      AACAATGA-TTAAATTAGCGACAGAAA----AGAGCTGAGTCTTTCTGTTTCACAACTGT 173
consensus_10997#2      GGCAGTGGCTTGCACTCAGCCTAGACG----GGTAGCAGCTATGTCTGTTGCTCAGCG-- 411
consensus_10997#4      GGCAGTGGCTTGCACTCAGCCTAGACG----GGTAGCAGCTATGTCTGTTGCTCAGCG-- 72
consensus_10997#1      AACAGTACCCAGGTTTGATCGAAGAATTTCTGGATATGTGTTCTCTTGCATCTCATTTGT 251
consensus_10997#5      TGGATTAC--AGTACGGATAGCCGCTT--CGAGATAATCACGTTCTGGCTCTGGAGTATA 178
                          * *                 *        *              *      *     

consensus_10997#0      ---TATTTACACCGAAGCT--TCTAAA-----TACTAAGT--GGAAAGAGAAATTTTATT 1173
consensus_10997#3      ---TATTTACACCGAAGCT--TCTAAA-----TACTAAGT--GGAAAGAGAAATTTTATT 221
consensus_10997#2      ---TGTTTCCGAGGAAA------TGGA-----TGTTGAAC--TTGGTCAAGAAGTGGGAT 455
consensus_10997#4      ---TGTTTCCGAGGAAA------TGGA-----TGTTGAAC--TTGGTCAAGAAGTGGGAT 116
consensus_10997#1      ATATGCCTTCTCTGTATACAATCTAAAACATTTTCCAGGTCTTGTACGCCCGGCCCTTCC 311
consensus_10997#5      AAATATCTCCACTGGATGAGTTCTACCG----GGCACGGT--CATAAGAGGTGCTTTGTG 232
                          *   * *   * *       *                                    

consensus_10997#0      AGCAAAACTCTAT-----AACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGT 1228
consensus_10997#3      AGCAAAACTCTAT-----AACGCCGGTAAAACCAAAGATTTTGAAATGGTAAACCTTAGT 276
consensus_10997#2      A-CAGTATTCGATTC---GAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACT 511
consensus_10997#4      A-CAGTATTCGATTC---GAGGATTGCACGTCCTCAAGGACCGTGATGAAATACATGACT 172
consensus_10997#1      GGCACGTTGTTGTGCAGAAGCCTTGCTGATAGCAGTGACTAAGAGAGATTCAACACGAAT 371
consensus_10997#5      AAAGTAATCTTGA-----AATTTTCCAGCGTCCAAAGTCGCACTCATGACAACTATTTTT 287
                                                       *            *             *

consensus_10997#0      A-GCGCAAAATCTACCTTCTGGGTATC-----ATAAAATATGCAG-ATTTCTAGACTATG 1281
consensus_10997#3      A-GCGCAAAATCTACCTTCTGGCT--------CTGGAGTATAAAATATCTCCACTGGATG 327
consensus_10997#2      G-ATG----GTATGCTTTTACGTG----------AAGGCATGTCTGATCCTT--TGCTCG 554
consensus_10997#4      G-ATG----GTATGCTTTTACGTG----------AAGGCATGTCTGATCCTT--TGCTCG 215
consensus_10997#1      ACGAGGATTGTAGACTTTTTGCTTTGCGAAACCTGGGTCAATAACAAAAACCACTCCATC 431
consensus_10997#5      AAATCTAATCTTTGCTTTGTGATTTCTTTAA-GTAGACCCATTAAAATATCAGTAGCCAA 346
                                 *   * **                            *             

consensus_10997#0      TATATTACAATACTAGAC--TGAGAA--GTG-TTGGCAAAAATAGACTATAGTGACCAAT 1336
consensus_10997#3      AGTTCTACCGGGCACGGTCATAAGAG--GTGCTTTGTGAAAGTAATCCTGGGTCATTTCG 385
consensus_10997#2      AGGCATACGGTGTTAT-------------------------------------------- 570
consensus_10997#4      AGGCATACGGTGTTATTCTTTTGGAC--GAAGCCCACGAAAG--AACCTTGGCTACTGAT 271
consensus_10997#1      AATTGTGAGGGATGTCTCTGCAATATTTGTGGACACCACAACCTTTCGACCGACAGCCCC 491
consensus_10997#5      GGTTCTTTCGTGGGCTTCGTCCAAAAGAATA-ACACCGTATGCCTCGAGCAAAGGATCAG 405
                            *                                                      

consensus_10997#0      ATTTGTAGAAATCAGTGTACAAAAATTCATTTAGTGTAGTGTTAATAAGTGACATTCTAA 1396
consensus_10997#3      AAAAGGGAAGGGTAGAGTAGAGAGG-------AATGCAACGGAGTTCACCAACGTCCGGG 438
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ATTTTAATGGGTCTACTTAAAGAAATCACAAAGCAAAGATTAGATTTAAAAATAGTTGTC 331
consensus_10997#1      ATTTGCACGTTTTGGAGGAG-GAGATTCAAAAATTCTTTGTTGAAGATTTGGTGGAAGGG 550
consensus_10997#5      ACATGCC----------------------------------------------------- 412
                                                                                   

consensus_10997#0      TTGGACGGACGGTGTACAAGATACAACTCTTATCCCCCATTTTAATTACACTCGTAATCC 1456
consensus_10997#3      CCCAAACCA--------------------------------------------------- 447
consensus_10997#2      ------------------------------------------------------------
consensus_10997#4      ATGAGTGCGACTTTGGACGCTGGAAAATTTCAAATCTTAAAAGTATTTGTTTAGTTAAAT 391
consensus_10997#1      TAGAGTAGAGAGGAATGCAACGGAGTTCACCAACGTCCGGGCCCAAACCACTACTTCTCT 610
consensus_10997#5      ------------------------------------------------------------
                                                                                   

consensus_10997#0      TTTAATAATTACAAAAATTGATTCATTTTACCTAAATTTTGAGACAAA----- 1504
consensus_10997#3      -----------------------------------------------------
consensus_10997#2      -----------------------------------------------------
consensus_10997#4      GTATCCTAGTTGTATCACATTTTATTTGGAGTTGGATGAAGCCATC------- 437
consensus_10997#1      CTGGATNACGTTGCATGCTTTCTCAATCTCCTCTTGTCCCGTCAGAACAGAAA 663
consensus_10997#5      -----------------------------------------------------
                                                                            




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)