These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11011#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 27 consensus length = 1230 fasta sequence [GCAATGCAGTGCATGCATCCACTCCCAAGGATGATGTATTTGCTGAGCCTGAACCAACAAAATCGCAAGACAGTCCAAACGTCGAAGGCCCTGGAACTGTTGAGAACATTCACAATAAAGCCCATGACATATTCCCCGTGCCTTTTGAGGGTGGTAGATTAGTTGTCAATAAAGGACTTTCCCCCAACTTCCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA-GC-GGAGTTCGAATCTAATTATCA--ACAACAATCAAATA-CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT-TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT-GGTTGGTTAGGATTTTATGT-TCTTGTTTTGTGCATATGCCCGGCTTTCCCCCTCTGAATGCACAATCTAGCTACTAGATAATCTTCAATTTTATGTGACCTTGCTGATCGTTTTTGTAAATAGTCGATTATTTATTCTAATCTGTAATCATTAGCTTGTAATACAAGCCTTGATTTTGCAGCGGTGTTCCTGAGTGAGATCATGCTTGTCATAATTCACATTAGTCAGCCAGTCATGTATTATGAATAAAATTAATATCTTTGTAAGTAAAAAAAAAAAAAAAAAAA] [+] EMBL AI977686 [GCAATGCAGTGCATGCATCCACTCCCAAGGATGATGTATTTGCTGAGCCTGAACCAACAAAATCGCAAGACAGTCCAAACGTCGAAGGCCCTGGAACTGTTGAGAACATTCACAATAAAGCCCATGACATATTCCCCGTGCCTTTTGAGGGTGGTAGATTAGTTGTCAATAAAGGACTTTCCCCCAACTTCCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACG ] [+] EMBL AI976634 [ AATGCAGTGCATGCATCCACTCCCAAGGATGATGTATTTGCTGAGCCTGAACCAACAAAATCGCAAGACAGTCCAAACGTCGAAGGCCCTGGAACTGTTGAGAACATTCACAATAAAGCCCATGACATATTCCCCGTGCCTTTTGAGGGTGGTAGATTAGTTGTCAATAAAGGACTTTCCCCCAACTTCCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGC ] [-] EMBL CD140502 [ AACATTCACAATAAAGCCCATGACATATTCCCCGTGCCTTTTGAGGGTGGTAGATTAGTTGTCAATAAAGGACTTTCCCCCAACTTCCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGCAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGCCAAATCACGA ] [+] EMBL CD202081 [ CCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGAACATCTCCAGTTGGCA GC GGAGTTCGAA ] [+] EMBL CD202069 [ CCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAGAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAGTCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GCGGGAG TCGAATCTAATTATCANNAC AC ATCANAT ] [+] EMBL CD201899 [ GTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCATCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATCAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAANAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCCAGTAAA GCCAAATACTCTTTTGGCATTGGACTTATGGGTTGGTAAGGNTTTTATGTNTCTTNGTTTGTGCAT ] [-] EMBL CD145215 [ AAAGTTCAAACGTCTTTACTTCTTATCAATCCTGATGTTGGTCGTGGTCAGCGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD196570 [ ATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATCAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTT ] [-] EMBL CD145264 [ TCAGTGTATGGTTGCGCTAGATGTAATGCGTTAAATCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCGACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GATTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD145186 [ AGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCAC AATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTAGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD202113 [ TGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAAGTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGATGGCATGC GGAGTTCGAATCTAATTATCA ACAACAATCGAATA CTGCCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAGCGGGAACATAGATTCCTCT TTCGAAAATAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCAGTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [+] EMBL CD148379 [ CCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCTGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCA TTCCTTTCACATTTTTTCTTTGTGCAATGGGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGGTGGTTAAGATTTTATGG TCTTGGTTTGT ] [+] EMBL CD148361 [ CCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCTATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGC TCTTGTTTTGT ] [-] EMBL CD148291 [ CCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACGATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GATTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD148320 [ CCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTCGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD148376 [ CCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATGTTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTGCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD148359 [ CCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCNNNNGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD148324 [ CCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD148343 [ CCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATGTACGACAATCTCCAGTTGGCA GC GGAGTTCGAATCTAATTATCA ACAACAATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD148342 [ caCCAACTGCCTGCAGGGCAATGCGGCGTTTTTAGCTTTGGTGCGAAGTCCACATGTTCACATTGGCAAGGTGTTGCAACTATCCGAGCATGGCAGAATTCCCTTCACGGTAGTTTCCATATTCAAATTGAGGACAATCTCCAGTTGTCATGC GGAGTTCGAATCTAATTATCA TCATCAATCAAATATCTACCACTTTAGGTTACAAATATGATATTCTCAAGGCGAATTTCACCTTCAAAGCACAAATAGTCTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACGTAT GGTTGGTTAGGATTATATGT TCTTGTTTTGTG ] [-] EMBL CD120531 [ atTCT ATTATCA ACAACAATCAAATA CTACCAC GTAGGTTACAAATATGATATTCCCAAGGCGAATTTCTCCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTAGAAAAAAAATTAACGCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAAT CTTTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTT ] [-] EMBL CD097690 [ ATCAAATA CTACCACTTTAGGTTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAGATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD201889 [ TTACAAATATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGGCTCCAACGGGAACATAGCTTCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTG ] [-] EMBL CD132408 [ CACCTTCAAAGCACAAATAGACTCCAACGGGAACATAGCATCCTCT TTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTG ] [-] EMBL AI395134 [ AATTAGACTCCAACGGGAACATAGCTT CTCTGTTCGAAAACAAATTAACTCCATTT CTTTCACATTTTCTCTTTGTGCAATGTGCAACCAAGTAAAGGCCAAATACTCTTTTGGCATTGGACTTAT GGTTGGTTAGGATTTTATGT TCTTGTTTTGTGCATATGCCCGGCTTTCCCCCTCTGAATGCACAATCTAGCTACTAGATAATCTTCAATTTTATGTGACCTTGCTGATCGTTTTTGTAAATAGTCGATTATTTATTCTAATCTGTAATCATTAGCTTGTAATACAAGCCTTGATTTTGCAGCGGTGTTCCTGAGTGAGATCATGCTTGTCATAATTCACATTAGTCAGCCAGTCATGTATTATGAATAAAATTAATATCTTTGTAAGTAAAAAAAAAAAAAAAAAAA] [+] EMBL CD137964 [ AGGATTTTATGT TCTTGTTTTGTGCATATGCCCGGCTTTCCCCCTCTGAATGCACAATCTAGCTACTAGATAATCTTCAATTTTACGTGACCTTGCTGATCGTTTTTGTAAATAGTCGATTATTTATTCTAATCTGTAATCATTAGCTTGTAATACAAGCCTTGATTTTGCAGCGGTGTTCCTGAGTGAGATC ] [+] EMBL CD138073 [ AGGATTTTATGT TCTTGTTTTGTGCATATGCCCGGCTTTCCCCCTCTGAATGCACAATCTAGCTACTAGATAATCTTCAATTTTATGTGACCTTGCTGATCGTTTTTGTAAATAGTCGATTATTTATTCTAATCTGTAATCATTAGCTTGTAATACAAGCCTTGATTTTGCAGCGGTGTTCCTGAGTGAGATC ] consensusID : consensus_11011#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 781 fasta sequence [CAACTAATCTACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCNAATTGACGACAATCTCCAGTTGGCAGCGGAGTTCGAATCTAATTATCAACCACAATCAAATACTACCACTTTTAGGTACAAATATGATATTCCCTAAGCGAATTTCACCTTCAAAGCAAAATAGACTTCAACGGGGACATAGCTCCCTCTTTCGAAAAAAATTAACTCCTTTCCTTTCAAATTTTCTCTTTGTGCATGTGCCACCAAGTAAAAGGCAAATTACTTTTTTGGCATTGAAACTAAGGTGGGATAGGAATTATGGTCTTGTTTGG] [+] EMBL CD202129 [CAACTAATCTACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATCGTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTTTGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTCCTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAGCTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATGTTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAGCTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCGTTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGACCATGGCAGAATTCACTTCACGGTAGTTTCCATATTCNAATTGACGACAATCTCCAGTTGGCAGCGGAGTTCGAATCTAATTATCAACCACAATCAAATACTACCACTTTTAGGTACAAATATGATATTCCCTAAGCGAATTTCACCTTCAAAGCAAAATAGACTTCAACGGGGACATAGCTCCCTCTTTCGAAAAAAATTAACTCCTTTCCTTTCAAATTTTCTCTTTGTGCATGTGCCACCAAGTAAAAGGCAAATTACTTTTTTGGCATTGAAACTAAGGTGGGATAGGAATTATGGTCTTGTTTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11011#0 GCAATGCAGTGCATGCATCCACTCCCAAGGATGATGTATTTGCTGAGCCTGAACCAACAA 60 consensus_11011#1 ------------------------------------------------------------ consensus_11011#0 AATCGCAAGACAGTCCAAACGTCGAAGGCCCTGGAACTGTTGAGAACATTCACAATAAAG 120 consensus_11011#1 ------------------------------------------------------------ consensus_11011#0 CCCATGACATATTCCCCGTGCCTTTTGAGGGTGGTAGATTAGTTGTCAATAAAGGACTTT 180 consensus_11011#1 ------------------------------------------------------------ consensus_11011#0 CCCCCAACTTCCAAGTTAACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATC 240 consensus_11011#1 ----CAACT----AATCTACCACTCTCTTTCACTAAATTCCGATGAACAATCTGGTTATC 52 ***** * * ****************************************** consensus_11011#0 GTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTT 300 consensus_11011#1 GTTTCGGTGTTACGTATGTCGGGCACAACAAAGTTTCAGACACGGAAAGTTATCCGGTTT 112 ************************************************************ consensus_11011#0 TGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTC 360 consensus_11011#1 TGATGGGTGAACTTCAGCCCAGTGGAAATATGCAGGCTCAAATAATTCACCGAATGTTTC 172 ************************************************************ consensus_11011#0 CTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAG 420 consensus_11011#1 CTTCAGTATATGTTCGCTATATTGCTCAGCTTCAACGTCACCGCTTCGGTGGACAACAAG 232 ************************************************************ consensus_11011#0 CTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATG 480 consensus_11011#1 CTTGTGTAGAGTATCGTAAGCCAAAAGTTCAAACGTCTTTAACTCTTATCAATCCTGATG 292 ************************************************************ consensus_11011#0 TTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAG 540 consensus_11011#1 TTGGTCGTGGTCAGTGTATGGTTGCGCTAGATGTAATGCGTCAAATCACGAAACGATTAG 352 ************************************************************ consensus_11011#0 CTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCG 600 consensus_11011#1 CTCTTGGAAGTGCTTTCTTTTATCAATGCTCTCCCCAGCTGCCTGCAGGGCAAGACGGCG 412 ************************************************************ consensus_11011#0 TTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGAC 660 consensus_11011#1 TTTTTAGCTTTGGTGCGAAGTACACATCTTCACATTGGCAAGGTGCTGCAACTATCCGAC 472 ************************************************************ consensus_11011#0 CATGGCAGAATTCACTTCACGGTAGTTTCCATATTCAAATTGACGACAATCTCCAGTTGG 720 consensus_11011#1 CATGGCAGAATTCACTTCACGGTAGTTTCCATATTCNAATTGACGACAATCTCCAGTTGG 532 ************************************ *********************** consensus_11011#0 CAGCGGAGTTCGAATCTAATTATCAACAACAATCAAATACTACCACTTTAGGTTACAAAT 780 consensus_11011#1 CAGCGGAGTTCGAATCTAATTATCAACCACAATCAAATACTACCACTTTTAGGTACAAAT 592 *************************** ********************* * ******* consensus_11011#0 ATGATATTCCCAAGGCGAATTTCACCTTCAAAGCACAAATAGACTCCAACGGGAACATAG 840 consensus_11011#1 ATGATATTCCCTAAGCGAATTTCACCTTCAAAGCA-AAATAGACTTCAACGGGGACATAG 651 *********** * ********************* ********* ******* ****** consensus_11011#0 CTTCCTCTTTCGAAAAAAAATTAACTCCATTTCCTTTCACATTTTCTCTTTGTGCAATGT 900 consensus_11011#1 CTCCCTCTTTCGAAAAAAA-TTAACTCC-TTTCCTTTCAAATTTTCTCTTTGTGCA-TGT 708 ** **************** ******** ********** **************** *** consensus_11011#0 GCAACCAAGTAAAGGCCAAAT-ACTCTTTTGGCATTGGACTTATGGTTGGTTAGGATTTT 959 consensus_11011#1 GCCACCAAGTAAAAGGCAAATTACTTTTTTGGCATTGAAACTAAGGTGGGATAGGAATT- 767 ** ********** * ***** *** *********** * ** *** ** ***** ** consensus_11011#0 ATGTTCTTGTTTTGTGCATATGCCCGGCTTTCCCCCTCTGAATGCACAATCTAGCTACTA 1019 consensus_11011#1 ATGGTCTTGTTTGG---------------------------------------------- 781 *** ******** * consensus_11011#0 GATAATCTTCAATTTTATGTGACCTTGCTGATCGTTTTTGTAAATAGTCGATTATTTATT 1079 consensus_11011#1 ------------------------------------------------------------ consensus_11011#0 CTAATCTGTAATCATTAGCTTGTAATACAAGCCTTGATTTTGCAGCGGTGTTCCTGAGTG 1139 consensus_11011#1 ------------------------------------------------------------ consensus_11011#0 AGATCATGCTTGTCATAATTCACATTAGTCAGCCAGTCATGTATTATGAATAAAATTAAT 1199 consensus_11011#1 ------------------------------------------------------------ consensus_11011#0 ATCTTTGTAAGTAAAAAAAAAAAAAAAAAAA 1230 consensus_11011#1 ------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||