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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11026#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1955 fasta sequence
[CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA-AACAAA-AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC-GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA-TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA-TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAGTTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGAACCATCAACTCCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAAAGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTCCTTGGTTAGGTCCATTAGAAGCTGTACGTTTAGGATTATTAAATTGGGAAACTGGTGAAGTTGCTGCTGATTGGCCAGCAAGACCAATGTTACGTAGTATGAATTCTACAGGGCATTTATT-AGCAGAAGATTTTATTCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGAAGAAATAGAACCACAACGTTATCTAACAACATCAGGTACACCAAATAAAGAACCAGGATCACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGAACATGATGATATTGAAGANAATTATCATCATCAAACTAATCAATATCATCATGAATTCAATATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTTATATCATCCATTTAATATATTACCTGATACTAGAGTGTATCATGTACTCGATTGATATACATCACATATATATGATATGATATCATAGATCGAGTGCTG]
[+] EMBL CD096324 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGGTTGTGAAT ]
[+] EMBL CD096492 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAta ]
[+] EMBL CD096366 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCA ]
[+] EMBL CD096470 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATANAAGTGAAGATATATCTGTGTCANAATATAGGTCTCACCAACTG ]
[-] EMBL CD156279 [ TAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAANAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTGGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGACTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCT ]
[+] EMBL CD166876 [ GATTTGATGGTTTGTGAA TGGGTGTGCTAACAGATCCGTTCTATGATCAACAATACTTTATCAAGAACAAAGAGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGG ]
[+] EMBL CD167468 [ AA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAG TCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCGGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGGTTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAG ]
[+] EMBL AI067925 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATT ]
[+] EMBL AI068213 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTACAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAA ]
[+] EMBL AI068280 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAA TTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAA CCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAAT ]
[+] EMBL AI067415 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATACGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTACAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGATCAACTACGTCAACGAACATTACAATATGAATTACTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACATGA TTATTTGCACCAGTTGCAA ]
[+] EMBL AI068043 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTG ]
[+] EMBL AI068229 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTAT ]
[+] EMBL AI067496 [ cAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAA TTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAA TTGGTATGCTTACAGAAGAAA CCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCA ]
[+] EMBL AI068234 [ TGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAA ]
[+] EMBL AI067453 [ TGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGGACACAAGCAATTCCTATAGAATCAGATCTCGGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAG ]
[+] EMBL AI067327 [ TGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCACGAACAGGATTTATTTGCA CAGTT ]
[+] EMBL AI068272 [ TGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAAGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGA GATGGATTCGACTTGGTGAAGTCAATGAATATGTGGATTTCAATGAC ]
[+] EMBL AI067844 [ TGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTCNGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATG ]
[+] EMBL AI067954 [ TGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACAGAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGA ]
[+] EMBL CD096657 [ TCCAAGAACAGGA TTATTTGCACCAGTTGCAAAGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGG ]
[+] EMBL AI976782 [ TGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAGTTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGAACCATCAACTCCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAAAGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTC ]
[+] EMBL AW017428 [ GGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAGTTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGAACCATCAACTTCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTA ]
[+] EMBL AI976851 [ GAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAAAGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTCCTTGGTTAGGTCCATTAGAAGCTGTACGTTTAGGATTATTAAATTGGGAAACTGGTGAAGTTGCTGCTGATTGGCCAGCAAGACCAATGTTACGTAGTATGAATTCTACAGGGCATTTATT AGCAGAAGATTTTATTCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGAAGAAATAGAACCACAACGTTATCTAACAACATCAGGTACACCAAATAAAGAACCAGGATCACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGAACATGATGATATTGAAGANAATTATCATCATCAAACTAATCAATATCATCATGAATTCAATATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTTATATCATCCAT ]
[+] EMBL CD080287 [ gAGGCCAAAAATTCGGCACGAG GTTTATTCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGAAGAAATAGAACCACAACGTTATCTAACAACATCATGTACACCAAATAAAGAACCAGGATCACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGAACATGATGATATTGAAGAAAATTATCATCATCAAACTAATCAATATCATCATGAATCCAATATACCNAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTTATATCATCCATTTAATATAT ]
[+] EMBL SMAA69037 [ ATATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTAC TCTAATTTATATCATCCATTTAATATATTACCTGATACTAGAGTGTATCATGTACTCGATTGATATACATCACATATATATGATATGATATCATAGATCGAGTGCTG]
consensusID : consensus_11026#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 579 fasta sequence
[CGACGGCTCACGGAACTTTATCAAAACAAAAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGACCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTAAACAATGGAATAATATCCGTGGGCTGCTATGAATTGGG]
[+] EMBL CD167319 [CGACGGCTCACGGAACTTTATCAAAACAAAAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGACCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAG ]
[-] EMBL CD062803 [ cacggACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTAAACAATGGAATAATATCCGTGGGCTGCTATGAATTGGG]
consensusID : consensus_11026#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence
[GGGTGTTGGTGATGCTGGAAATGTACTAAAATGTATCTATTTTTTTCTTTTTTAATTCTAAGATAAAGAAATCATGATTGTAAACTATAAAAAGAGTGTAATTTCTCTTTTCGATTTATTGATGACCTCTTGCATTATCAGGTGAAATAGTTCTTGATGAAGTCTCTTGATATTCTTCCCATATTTGTGTTTCACTTGTCCATGAATGTTCATCATTTTCATGTCTTACTTGCATACGTGATGGAATTAATTTATAATCATTATATAATGGTGATGTTATATCAGTTCGAGTACATGATACACTTCTAGTATCAGGTAATATATTAAATGGATGATATAAATTAGATGTACTCAAATCTCTAGGTGTAAAA]
[+] EMBL CD193004 [GGGTGTTGGTGATGCTGGAAATGTACTAAAATGTATCTATTTTTTTCTTTTTTAATTCTAAGATAAAGAAATCATGATTGTAAACTATAAAAAGAGTGTAATTTCTCTTTTCGATTTATTGATGACCTCTTGCATTATCAGGTGAAATAGTTCTTGATGAAGTCTCTTGATATTCTTCCCATATTTGTGTTTCACTTGTCCATGAATGTTCATCATTTTCATGTCTTACTTGCATACGTGATGGAATTAATTTATAATCATTATATAATGGTGATGTTATATCAGTTCGAGTACATGATACACTTCTAGTATCAGGTAATATATTAAATGGATGATATAAATTAGATGTACTCAAATCTCTAGGTGTAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11026#0 CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAA 60
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 AGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGAT 120
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 CAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAA 180
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 CAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAA 240
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 AGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTG 300
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAAA 360
consensus_11026#1 -----------------------------------CGACGGCTCACGGAACTTTATCAAA 25
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ACAAAAGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACT 420
consensus_11026#1 ACAAAA--AAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACT 83
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ACGGGTATTCAGACATCAGTAATTCACCTGG-CCAGTATTATCTCTTCAGGTGACTTAGA 479
consensus_11026#1 ACGGGTATTCAGACATCAGTAATTCACCTGGACCAGTATTATCTCTTCAGGTGACTTAGA 143
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGA 539
consensus_11026#1 ATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGA 203
consensus_11026#2 ---GGGTGTTGGTGATGCTGGAAATGTACTAAA---ATGTATCTATTTTTTTCTTTTTTA 54
** ** ** *** * * *** * ** * * *** ** ** * * *
consensus_11026#0 TGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTG 599
consensus_11026#1 TGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTG 263
consensus_11026#2 ATTCTAAGATAAAGAAATCATGATTGTAA-ACTATAAAAAGAGTGTAATTTCTCTTTTCG 113
* * * *** ** *** * *** * * * * ** *
consensus_11026#0 CTCTA--GATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCA 657
consensus_11026#1 CTCTA--GATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCA 321
consensus_11026#2 ATTTATTGATGACCTCTTGCATTATCAGGTGAAATAGTTCTTGATGAAGTCTCTTGA-TA 172
* ** *** *** ** * * * * ** * * * * * * *
consensus_11026#0 ATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATC 717
consensus_11026#1 ATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATC 381
consensus_11026#2 TTCTTCCCATATTTGTGTTTC----ACTTGTCCATGAATGTTCATCATTTTC---ATGTC 225
* * * * * ** * ** * *** * * ** * ** **
consensus_11026#0 TCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATG 777
consensus_11026#1 TCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATG 441
consensus_11026#2 TTACTT-----GCATACGTGATGGAATTAATTTATAATCATTATATAA--TGGTGATGTT 278
* * ** * * * * *** * ** ** ** * ** * *
consensus_11026#0 CTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTA 837
consensus_11026#1 CTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTA 501
consensus_11026#2 ATATCAGTTCGAGTACATGATACACTTCTAGTATCAGGTAATATAT-TAAATGGATGATA 337
* *** * ** * * * * * ** * * ** * ** * * **
consensus_11026#0 CAATATGAAT-TATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCG 896
consensus_11026#1 CAATATGAAT-TATTTGAATCTCAATATTCAACATCATGTAAACAATGGAATAATATCCG 560
consensus_11026#2 TAAATTAGATGTACTCAAATCTCTAGGTGTAAAA-------------------------- 371
** * ** ** * ****** * * ** *
consensus_11026#0 TGAAGTGGCTAGTCCAAGAACAGGATTATTTGCACCAGTTGCAATGGCAATAAGAAGAGG 956
consensus_11026#1 TGGGCTG------CTATGAATTGGG----------------------------------- 579
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ATGGATTCGACTTGGTGAAGTCAATGAATATGTGGATCCAATGACCGGAGTTGCTATTCC 1016
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGA 1076
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 TAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTG 1136
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 GTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAA 1196
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 TTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAG 1256
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 TTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGA 1316
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ACCATCAACTCCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAA 1376
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 AGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTCCTTGGTTAGGTCCATT 1436
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 AGAAGCTGTACGTTTAGGATTATTAAATTGGGAAACTGGTGAAGTTGCTGCTGATTGGCC 1496
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 AGCAAGACCAATGTTACGTAGTATGAATTCTACAGGGCATTTATTAGCAGAAGATTTTAT 1556
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 TCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGA 1616
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 AGAAATAGAACCACAACGTTATCTAACAACATCAGGTACACCAAATAAAGAACCAGGATC 1676
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGA 1736
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ACATGATGATATTGAAGANAATTATCATCATCAAACTAATCAATATCATCATGAATTCAA 1796
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 TATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTT 1856
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ATATCATCCATTTAATATATTACCTGATACTAGAGTGTATCATGTACTCGATTGATATAC 1916
consensus_11026#1 ------------------------------------------------------------
consensus_11026#2 ------------------------------------------------------------
consensus_11026#0 ATCACATATATATGATATGATATCATAGATCGAGTGCTG 1955
consensus_11026#1 ---------------------------------------
consensus_11026#2 ---------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||