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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11032#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1212 fasta sequence
[TCAATTATCAAACAAATTCCAGAAGCTAAAAGTATAGGTTTGTTACAATTGTGTGACTTCATAGAGGATTGTGAACATGTTAAACTAACACAGCGTATACTCCATCTGTTAGGGCGGGAGGGACCTTACCTCAAACGTCCTCGTCAATTTACGCGTTACATTTACAATAGAGTTATGCTCGAGTCAGCTCCCATTAAGTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAATGAGGAATTACTTCCGAGTATTCTTGTACTTCTTAAACGAATTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC-TTTCTA-CCACTATATTTTATCAAATAACCAAGTAGCATTAAAATCTGCTTACCTTTT-AAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCTTTGTTGGATTATGTGCATAACTCCCACACA-GT-TGCTGGTAGTCCTTTCTCTTTGACGACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA-CCTTAGTTCTGCCATTG-AATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGAAACACATCACTTGCTTCTCAG-ATGTCA-GGAAAAC-GTATTCAAGATTCATTTGCTGAGCAGCTGGCATCTATACCCGAATTTTCTGATCTTGGCTCTATATTCAAATCTTCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG-TACCTTGC-AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGACCCTTCGGATCCTGGTTTGCCAGATGAATATCAATT-GGAAGACCTGGTCCTAGGTATCTCAGACCATATTCAACGTGTTTCAAAACAAAACTTTACAGTGGCCTGGCAGGAACTCAGCCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGACACCTGCCTG]
[-] EMBL CD095177 [TCAATTATCAAACAAATTCCAGAAGCTAAAAGTATAGGTTTGTTACAATTGTGTGACTTCATAGAGGATTGTGAACATGTTAAACTAACACAGCGTATACTCCATCTGTTAGGGCGGGAGGGACCTTACCTCAAACGTCCTCGTCAATTTACGCGTTACATTTACAATAGAGTTATGCTCGAGTCAGCTCCCATTAAGTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAATGAGGAATTACTTCCGAGTATTCTTGTACTTCTTAAACGAACTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC TTTCTA CCACTATATTTTATCAAATAACCAAGTAGCATTAAAATCTGCTTACCTTTT AAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCTTTGTTGGATTATGTGCATAACTCCCACACA GT TGCTGGTAGTCCTT ]
[+] EMBL CD159640 [ CTAACACAGCGTATACTCCATCTGTTAGGGCGGGAGGGACCTTACCCCAAACGTCCTCGTCAATTTACGCGTTACATTTACAATAGAGTTATGCTCGAGTCAGCTCCCATTAAGTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAATGAGGAATTACTTCCGAGTATTCTTGTACTTCTTAAACGAATTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC TTTCTA CCACTATATTTTATCAAATAACCAAGTAGCATTAAAATCTGCTTACCTTTT AAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCTTTGTTGGATTATGTGCATAACTCCCACACA GT TGCTGGTAGTCCTTTCTCTTTGACGACCGTCCCAATAGCTGATATTt ]
[+] EMBL CD168942 [ acgtttTCTGTTAGAGCACGAGGGACCTTACCTCAAACGTCCTCGTCAATTTACGCGTTACATTTACAACAGAGTTATGCTCGAGTCAGCTCCCATTAAGTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAATGAGGAATTACTTCCGAGTATTCTTGTACTTCTTAAACGAATTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC TTTCTA CTACTATA ]
[+] EMBL CD169091 [ CTTACCTCAAACGTCCTCGTCAATTTACGCGTTACATTTACAATAGAGTTATGCTCGAGTCAGCTCCCATTAAGTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAATGAGGAATTACTCCCGAGTATTCTTGTACTTCTTAAACGAATTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC TTTCTA CTACTATATTTTATCAAATAACCAAGTAGCATTAAAATCTGCTTACCTTTT AAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCTTTGTTGGATTATGTGCATAACTCCCAC CAGGTGTGCTGGTAGTCCTTTCTCTTTGACGACAGTCCCAATAGCTGATATTGTTCANCCAAATGACCCTTAGTTCTGCCACTGAAATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGT ]
[+] EMBL CD195561 [ GTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAATGAGGAATTACTTCCGAGTATTCTTGTACTTCTTAAACGAATTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC TTTCTA CCACTATATTTTATCAAATAACCAAGTAGCATTAAAATCTGCTTACCTTTT AAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCTTTGTTGGATTATGTGCATAACTCCCACACA GT TGCTGGTAGTCCTTTCTCTTTGACGAC ]
[-] EMBL CD116050 [ TTCNGAGTATTCTTGTACTTCTTAANCGAATTATGATTGATGAAGACGATGAGGTTCGTGATCGCGCAGC TTTCTA CTACTATA TTTATCAAATANCCAAGTAGCATTAAAATCTGCTTACCTNTT AGTGAAGAAATGCATCTAAGTCCATCTGGTNTAGAGCGTGCTNTGTTGGATTATGTGCATAACTCCCACACA GT TGCTGGTAGTCCTTTCTCTTTGACGACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA CCTTAGTTCTGCCATTG AATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGTAACACATCACTTGCTTCTCAG ATGTCA GGAAAAC GTATTCAAGATTCATTTGCTGAGCAGCTAGCATCTATACCCGAATTTTCTGGTCTTGGCTCTATATTCAAATCTTCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGA ]
[+] EMBL CD112772 [ AGCTTTTCTACCCACTATATTTTATCAAATAACCAAGTAGCATTAAAATCTGCTTACCTTTTAAAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCTTTGTTGGATTATGTGCATAACTCCCACACA GT TGCTGGTAGTCCTTTCTCTTTGACGACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA CCTTAGTT ]
[-] EMBL CD134889 [ GACGACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA CCTTAGTTCTGCCATTG AATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGAAACACATCACT ]
[+] EMBL BF936231 [ GACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA CCTTAGTTCTGCCATTG AATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGAAACACATCACTTGCTTCTCAG ATGTCA GGAAAAC GTATTCAAGATTCATTTGCTGAGCAGCTGGCATCTATACCCGAATTTTCTGATCTTGGCTCTATATTCAAATCTTCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGAT ]
[+] EMBL AI975466 [ GACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA CCTTAGTTCTGCCATTG AATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGAAACACATCACTTGCTTCTCAG ATGTCA GGAAAAC GTATTCAAGATTCATTTGCTGAGCAGCTGGCATCTATACCCGAATTTTCTGATCTTGGCTCTATATTCAAATCTTCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTT ]
[+] EMBL AI975502 [ GACAGTCCCAATAGCTGATATTGTTCAGCCAAATGA CCTTAGTTCTGCCATTG AATCGGATGTTGTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGAAACACATCACTTGCTTCTCAG ATGTCA GGAAAAC GTATTCAAGATTCATTTGCTGAGCAGCTGGCATCTATACCCGAATTTTCTGATCTTGGCTCTATATTCAAATCTTCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATG ]
[+] EMBL CD060883 [ CTCAGCATGTCATGGAAAACTGTATTCAAGATTCATTTGCTGAGCAGCTGGCATCTATACCCGAATTTTCTGATCTTGGCTCTATATTCAAATCTTCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGACCCTTCGGATCCTGGTTTGCCAGATGAATATCAATT GGAAGACCTGGTCCTAGGTATCTCAGACCA ]
[+] EMBL AA999213 [ TAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGACCCTTCGGATCCTGGTTTGCCAGATGAATATCAATTGGGAAGACCTGGCCCTAGGTATCTCAGACCATATTCAACGTGTTTCAAAACA ]
[+] EMBL CD061141 [ GTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTATAATATTGTCTGCACAGATACCTTGCAAAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGACCCTTCGCATCCTGGTTTGCCAGATGAATATCAATT GGAAGACCTGGTCCTAGGTATCTCAGACCATATTCAACGTGTTTCAAAACAAAACTTTACAGTGGCCTGGCAGGAACTCAGCCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAAT ]
[+] EMBL CD061114 [ ATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGACCCTTCGGACCCTGGTTTGCCAGATGAATATCAATT GGAAGACCTGGTCCTAGGTATCTCAGACCATATTCAACGTGTTTCAAAACAAAACTTTACAGTGGCCTGGCAGGAACTCAGCCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAAT ]
[-] EMBL CD061173 [ TGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAG TACCTTGC AAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGACCCTTCGGACCCTGGTTTGCCAGATGAATATCAATT GGAAGACCTGGTCCTAGGTATCTCAGACCATATTCAACGTGTTTCAAAACAAAACTTTACAGTGGCCTGGCAGGAACTCAGCCCTGAAAGTGAAGTAGAAGAGGCGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGACACCTGCCTG]
consensusID : consensus_11032#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 521 fasta sequence
[TCGCATGGCTCCCGNGCCGCCATGGGGCGGCCGCGGNGAATTCGATTACTTCGACGGGCCTGGCAGGAACTCAGCCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGTGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAATAATAGCTGATGCCAGGGGTTGAGTTGTCATACTGAAAGACTTCCTTATTACTATATGACATATCCTACTTATGTATTGTATTAATTCTTTGTTTCTTACATTGGACTAATGGTAATCACTTTGTTTACAAATTTAATCAAACTACAAAGC]
[+] EMBL CD162392 [TCGCATGGCTCCCGNGCCGCCATGGGGCGGCCGCGGNGAATTCGATTACTTCGACGGGCCTGGCAGGAACTCAGCCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAGCTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGCGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAATAATAGCTGATGCCAGG ]
[+] EMBL CD158446 [ CCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGCGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTCGTTAGCCGAA ]
[+] EMBL CD158401 [ CCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGCGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAA ]
[+] EMBL CD120579 [ CCCTGAAAGTGCAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGTGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAA ]
[+] EMBL CD158340 [ CCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAGGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGTGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAA ]
[+] EMBL CD158383 [ CCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCGAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGCGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGCTGTTAGCCGAA ]
[+] EMBL CD158428 [ CCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGTGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAA ]
[+] EMBL CD158403 [ CCCTGAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGCACAAGACTATTAAAGAAACGATGCGTCAAATTATCGAACACCTTGGACTTCAGCCTTGTGATCAAACTGATCATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCTGTCCGGGGTATATCGTGGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGTGTAGCTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAA ]
[-] EMBL CD114486 [ TTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGATGCATCCCCTCATTCAAACGAACAGGGTGTAACTTTCCAAATCACAGTACGTTCATCTGATCCCGTTGTTAGCCGAATAATAGCTGATGCCATCGGTTGAGTTGTCATACTGAAAGACTTCCTTATTACTATATGACATATCCTACTTATGTATTGTATTAATTCTTTGTTTCTTACATTGGACTAATGGTAATCACTTTGTTTACAAATTTAATCAAACTACAAAGC]
consensusID : consensus_11032#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[GGCTCCCGNGCCGCCATGGGGCGGCCGCGGGNAATTCGATTTAGGGCTCCAGTACTGATAGCCGATTTCAAATGTGTAAGAGTTTGGCTTAAGTAAGTTTCTTTATGATTACTATTGTTAGTATTACTATTGTTTACAAAATTGACTAGGTTAGAACAGTTGATTTGTGTTCCACCATTCATGAGTGGTACACCAATGATTCCATTAGATTGAATGTTTGATAAGGCTGAATGTGTTTTCTGTCCAGATGGTGAACACTGTAATAGTGTTACATTATGACAAATCTGAACCATTTCAGATGGAGATGCTTTAAATAGTTCTACATATCTATCACCTAAATAATCTTTATGACGTATTAATGCTTTAGTTGCTATATGATCATTACAAAATAGAATAAATGCATCACCAGTTGGTCGTTGATCTGGATAAACAACTAAATATACTCCTTGTTCATTGAACATAATTGGTGCTAGTACAGCATTGAAAAATTCAATAATTTGTTTT]
[+] EMBL CD119688 [GGCTCCCGNGCCGCCATGGGGCGGCCGCGGGNAATTCGATTTAGGGCTCCAGTACTGATAGCCGATTTCAAATGTGTAAGAGTTTGGCTTAAGTAAGTTTCTTTATGATTACTATTGTTAGTATTACTATTGTTTACAAAATTGACTAGGTTAGAACAGTTGATTTGTGTTCCACCATTCATGAGTGGTACACCAATGATTCCATTAGATTGAATGTTTGATAAGGCTGAATGTGTTTTCTGTCCAGATGGTGAACACTGTAATAGTGTTACATTATGACAAATCTGAACCATTTCAGATGGAGATGCTTTAAATAGTTCTACATATCTATCACCTAAATAATCTTTATGACGTATTAATGCTTTAGTTGCTATATGATCATTACAAAATAGAATAAATGCATCACCAGTTGGTCGTTGATCTGGATAAACAACTAAATATACTCCTTGTTCATTGAACATAATTGGTGCTAGTACAGCATTGAAAAATTCAATAATTTGTTTT]
consensusID : consensus_11032#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 303 fasta sequence
[ACCCGGGTATGGCGCACCATTTTCAAATCTTGCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAGTACCTTGCAAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTT]
[+] EMBL CD126993 [ACCCGGGTATGGCGCACCATTTTCAAATCTTGCCTCCCCGGTAGAATTAACTGAATCTGACACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCTTGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTCTCGTGCGAGCCGGACGACTCCCTGTTTAATATTGTCTGCACAGTACCTTGCAAAAGCTTAAAGTATAATTCTCCCGCTGTGACGTATGTTCTAGTTGAGTTGCCGGAGGATCTGGAATGTCATTCTGCTACTTT]
consensusID : consensus_11032#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 289 fasta sequence
[GCCTCCCGNGCCGCCATGGGGCGGCCGCGGGNAATTCGATTACTTCGACGGGCCTGGCACGAGCATTTGGCGCTGGGGGCGGCGATGGCCATTGAGCGCGCACTGCCGTTTGCGCGTTGAACCATCAATCCAGCTTCAGTCCCACCTGCGCGCGCTTGGGCAATTTGCTTACCACCAACTGGTGCGAGCGCTGCAACAGGCCACGCAGTTCCTCGGCGCCCAGCGGGTAGGGCGTGTTCATGATCACCCACTGCGCCCGCGCCAGGTACGGTGCGGGGTGGATGCCAGG]
[+] EMBL CD162353 [GCCTCCCGNGCCGCCATGGGGCGGCCGCGGGNAATTCGATTACTTCGACGGGCCTGGCACGAGCATTTGGCGCTGGGGGCGGCGATGGCCATTGAGCGCGCACTGCCGTTTGCGCGTTGAACCATCAATCCAGCTTCAGTCCCACCTGCGCGCGCTTGGGCAATTTGCTTACCACCAACTGGTGCGAGCGCTGCAACAGGCCACGCAGTTCCTCGGCGCCCAGCGGGTAGGGCGTGTTCATGATCACCCACTGCGCCCGCGCCAGGTACGGTGCGGGGTGGATGCCAGG]
[+] EMBL CD120595 [ GGCGCTGTGGGCGGCGATGGCCATTGAGCGCGCACTGCCGTTTGCGCGTTGAACCATCAATCCAGCTTCAGTCCCACCTGCGCGCGCTTGGGCAATTTGCTTACCACCAACTGGTGCGAGCGCTGCAACAGGCCACGCAGTTCCTCGGCGCCCAGCGGGTAGGGCGTGTTCATGATCACCCACTGCGCCCGCGCCAGGTACGGc ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11032#0 TCAATTATCAAACAAATTCCAGAAGCTAAAAGTATAGGTTTGTTACAATTGTGTGACTTC 60
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 ATAGAGGATTGTGAACATGTTAAACTAACACAGCGTATACTCCATCTGTTAGGGCGGGAG 120
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 GGACCTTACCTCAAACGTCCTCGTCAATTTACGCGTTACATTTACAATAGAGTTATGCTC 180
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 GAGTCAGCTCCCATTAAGTGCACAGCTACAACAGCTCTGGCGAGATTTGCTGCACACAAT 240
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 GAGGAATTACTTCCGAGTATTCTTGTACTTCTTAAACGAATTATGATTGATGAAGACGAT 300
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 GAGGTTCGTGATCGCGCAGCTTTCTACCACTATATTTTATCAAATAACCAAGTAGCATTA 360
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 AAATCTGCTTACCTTTTAAGTGAAGAAATGCATCTAAGTCCATCTGGTTTAGAGCGTGCT 420
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 TTGTTGGATTATGTGCATAACTCCCACACAGTTGCTGGTAGTCCTTTCTCTTTGACGACA 480
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 GTCCCAATAGCTGATATTGTTCAGCCAAATGACCTTAGTTCTGCCATTGAATCGGATGTT 540
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 GTAAAGATTAAAGCTAAACCTAATGCGATGGCTGGTGAAGGTCGAAACACATCACTTGCT 600
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ------------------------------------------------------------
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 ------------------------------------------------------------
consensus_11032#0 TCTCAGATGTCAGGAAAACGTATTCAAGATTCATTTGCTGAGCAGCTGGCATCTATACCC 660
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 ---------------------------------------------------TCGCATGGC 9
consensus_11032#4 ---------------------------------------------------------GCC 3
consensus_11032#2 ---------------------------------------------------------GGC 3
consensus_11032#0 GAATTTTCTGATCTTG-GCTCTATATTCAAATCTT-CCTCCCCGGTAGAATTAACTGAAT 718
consensus_11032#3 ----ACCCGGGTATGGCGCACCATTTTCAAATCTTGCCTCCCCGGTAGAATTAACTGAAT 56
consensus_11032#1 TCCCGNGCCGCCATGGGGCGGCCGCGGNGAATTCGATTACTTCGACGGGCCTGGCAGGAA 69
consensus_11032#4 TCCCGNGCCGCCATGGGGCGGCCGCGGGNAATTCGATTACTTCGACGGGCCTGGCACGAG 63
consensus_11032#2 TCCCGNGCCGCCATGGGGCGGCCGCGGGNAATTCGATTT-----AGGGCTCCAGTACTGA 58
* * * * ** *** *
consensus_11032#0 C--TGA-CACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCT 775
consensus_11032#3 C--TGA-CACTGAATATGTAGTAACATGCATAAAACATTTATTCTCAAGGCATTTAGTCT 113
consensus_11032#1 C--TCAGCCCTGAAAGTGAAGTAGAA-----GAGACGTATATGCTGGTGAAGCACAAGAC 122
consensus_11032#4 CATTTGGCGCTGGGGGCGGCGATGGCCATTGAGCGCGCAC-TGCCGTTTGCGCGTTGAAC 122
consensus_11032#2 TAGCCGATTTCAAATGTGTAAGAGTTTGGCTTAAGTAAGT---TTCTTTATGATTACTAT 115
*
consensus_11032#0 TGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTC-TCG 834
consensus_11032#3 TGCAGTTTGATTGTATCAATACAATGGCAGACCAAGTCTTGGAGAATGTCTATGTC-TCG 172
consensus_11032#1 TATTAAAGAAACGATGCGTCAAATTATCGAAC---ACCTTGGACTTCAGCCTTGTGATCA 179
consensus_11032#4 CATCAATCCAGC-TTCAGTCCCACCTGCGCGC----GCTTGGGCAATTTGCTTACCACCA 177
consensus_11032#2 TGTTAGTATTACTATTGTTTACAAAATTGACT--AGGTTAGAACAGTTGATTTGTGTTCC 173
* * * * *
consensus_11032#0 TGCGAGC-CGGACGACTCCCTGTTTAATATTGTCTGCACAGTACCTTGCAAAAGCTTAAA 893
consensus_11032#3 TGCGAGC-CGGACGACTCCCTGTTTAATATTGTCTGCACAGTACCTTGCAAAAGCTTAAA 231
consensus_11032#1 AACTGAT-CATATGCCTCATGAAGGAAAGTCATCTCATCAGCTCCTTCT----GTCCGGG 234
consensus_11032#4 ACTGGTG-CGAGCGCTGCAACAGGCCACG-CAGTTCCTCGGCGCCCAGC----GGGTAGG 231
consensus_11032#2 ACCATTCATGAGTGGTACACCAA-TGATTCCATTAGATTGAATGTTTGATAAGGCTGAAT 232
* * * *
consensus_11032#0 GTATAATTC-TCCCGCTGTGACGTAT--GTTCTA-GTTGAGTTGCCGGAGGATC-TGGAA 948
consensus_11032#3 GTATAATTC-TCCCGCTGTGACGTAT--GTTCTA-GTTGAGTTGCCGGAGGATC-TGGAA 286
consensus_11032#1 GTATATCGT-GGTGGATACCAAGTTTTGGCCTTATGTAAACTTGCTAAAGTATTGTCTGA 293
consensus_11032#4 GCGTGTTCA-TGATCACCCACTGCGCCCGCGCCAGGTACGGT-GCGGGGTGGATGCCAGG 289
consensus_11032#2 GTGTTTTCTGTCCAGATGGTGAACACTGTAATAGTGTTACATTATGACAAATCTGAACCA 292
* * ** *
consensus_11032#0 TGTCATTCTGCTACTTTTATCAACACATTGAAATTTACTATCAAAGATACTGACTCTGAC 1008
consensus_11032#3 TGTCATTCTGCTACTTT------------------------------------------- 303
consensus_11032#1 TG-CATCCCCTCATTCAAACGAACAGGGTGTAACTTTCCA--AATCACAGTACGTTCATC 350
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 TTTCAGATGGAGATGCTTTAAATAGTTCTACATATCTATCACCTAAATAATCTTTATGAC 352
consensus_11032#0 CCTTCGGATCCTGGTTTGCCAGATGAATATCAATTGGAAGACCTGGTCCTAGGTATCTCA 1068
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 TGATC---CCGTTGTTAGCCGAATAATAGCTGATGCCAGGGGTTGAGTTGTCATACTGAA 407
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 GTATTAATGCTTTAGTTGCTATATGATCATTACAAAATAGAATAAATGCATCAC-CAGTT 411
consensus_11032#0 GACCATATTCAACGTGTTTCAAAACAAAACTTTACAGTGGCCTGGCAGGAACTCAGCCCT 1128
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 AGACTTCCTTATTACTATATGACATATCCTACTTATGTATTGTATTAATTCTTTGTTTCT 467
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 GGTCGTTGATCTGGATAAACAACTAAATATACTCCTTGTTCATTGAACATAATTGGTGCT 471
consensus_11032#0 GAAAGTGAAGTAGAAGAGACGTATATGCTGGTGAAGC--ACAAGACTATTAAAGAAACGA 1186
consensus_11032#3 ------------------------------------------------------------
consensus_11032#1 TACATTGGACTAATGGTAATCACTTTGTTTACAAATTTAATCAAACTACAAAGC------ 521
consensus_11032#4 ------------------------------------------------------------
consensus_11032#2 AGTACAGCATTGAAAAATTCAATAATTTGTTTT--------------------------- 504
consensus_11032#0 TGCGTCAAATTATCGACACCTGCCTG 1212
consensus_11032#3 --------------------------
consensus_11032#1 --------------------------
consensus_11032#4 --------------------------
consensus_11032#2 --------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||