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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11039#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1566 fasta sequence
[AGCGGTTGTTTCGAACTGCAGGCAACTATTAAGTAATGGATGAAAACGAAAAGAAAGCGAGAGAACTAATTGCTGAGGCACAAAAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAGGTTCGGACAAGACAGATGAAGCAATATCCTTGTATGAAAAAGCGGGAAATTGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA-GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCAGAAAGCGCTCAAAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG-CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA-ACTTATATATGTGCAAT-ACACTATTTTCCTCCA--TCTTGCACTTACA-ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC-ATTTCCGTATTTTCCTCT-TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCTTTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACAATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTCTTCTGACAGTGGATTTAACTTACATAGTAATTGTATGATATCAGCGCTCACTTAACTATACTAAAAAAAACTTGGCCTATACATTTTTTATTGGGTTCTAAATGTTAATGTCCTTATATAGTGTTTGTTGTGTGGAAAGGGCA]
[+] EMBL CD113405 [AGCGGTTGTTTCGAACTGCAGGCAACTATTAAGTAATGGATGAAAACGAAAAGAAAGCGAGAGAACTAATTGCTGAGGCACAAAAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAGGTTCGGACAAGACAGA ]
[+] EMBL CD131552 [ CTATTAAGTAATGGATGAAAACGAAAAGAAAGCGAGAGAACTAATTGCTGAGGCACAAAAAAAGATTAAAAAGGGGTTCTTTTCTTTCGGTTTAGGTTCGGACAAGACAGATGAAGCAATATCCTTGTATGAAAAAGCGGGAAATTGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGA ]
[+] EMBL CD201770 [ AAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAAGTTCGGACAAGACAGATGAAGCAATATCTTTGTATGAAAAAGCGGGAAATTGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGCTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAANGGACATCTT ]
[+] EMBL CD082532 [ aggGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCAGAAAGCGCTCANAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATC ]
[+] EMBL CD190758 [ AGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCT ]
[+] EMBL CD188473 [ GATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCACAAAGCGCTCAAAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTATAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGACAACATTAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTAGTTATTTAAATAAATGAATAATTTAGCACTAACTGTTATCATGTTGAGAACCATGTCAAATAACATTTAGTTGTATCGTATATCTTTTTGAGTTACCATGCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTGCA TCTTGCA ]
[+] EMBL CD132653 [ TCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACGATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCAGAAAGCGCTCAAAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTNTTCTGA ACTTATATATGTGCCAT ACACTATTTTCCTCCA TCTTGCAC ]
[+] EMBL CD136289 [ TGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTCCTGTGTGGATTTAATCAATGGCCA ]
[-] EMBL CD152910 [ TTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTAAAG CTTAAGAAACCAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGAGACTTATATATGTGCAATCACACTATTTTCCTCCATTTCTTGCACTTACAGATCAACCAA ]
[+] EMBL CD152728 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAAAATGTAGAAGCTTTTACAACGGCTGGTCAAGAATATGACAATATAACTCGACTTGGACCATTGATTACATTACTTTTTCTTAAGCCTAAAAAAAACAATAAGTGAAGAAAAGGATATCACTTAATTTTTAAAACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACCTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACACAATTTCCGNATTTTCCTCT TTGGCTAAATGGGTTTGAAAAATAAGTTTATTTTGTTTTACAAG ]
[+] EMBL CD201810 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAG ]
[+] EMBL CD201767 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTGTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTT ]
[+] EMBL CD152675 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT ]
[+] EMBL CD152653 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTCAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTT ]
[+] EMBL CD152750 [ TGATGAAGAAATTATCATAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACACCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAGGAAGAGGATATCACTTAATTTTTAAGACTTGACGCTAT ]
[-] EMBL CD144996 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ]
[-] EMBL CD201801 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCGACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ]
[-] EMBL CD145096 [ GATGAAGAGATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTA TTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ]
[-] EMBL CD152880 [ GATAAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACACGGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCGTTAAG CTTAAGAAAGCAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTAACCATTCATTTTTCTGA ACTTATATATGTGCAAC ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGG ]
[-] EMBL CD201727 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ]
[-] EMBL CD152955 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ACTTCCGTATTTTCCTCTGTTGTga ]
[-] EMBL CD152885 [ GATGAAGAAATTATCAGAGGCTTTGG ACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTTCATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGG ]
[+] EMBL AW016993 [ AGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACA ]
[-] EMBL CD076128 [ GAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCTTTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACAATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTCTTCTGACAGTGGATTTAACTTACATAGTAATTGTATGATATCAGCGCTCACTTAACTATACTAAAAAAAACT ]
[-] EMBL CD152643 [ AGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACGCTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTCGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCGTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTAATACTACAACATAAAATTCATTATATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTCCAAGG ]
[+] EMBL AW018279 [ TCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCTTTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACAATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTCTTCTGACAGTGGATTTAACTTACATAGTAATTGTATGGTATCCGCGCTCACTTAACTATACTAAAAAAACTTTGGCCTATACATTTTTTATTGGGTTCTAAATGTTAATGTCCTTATATAGTGTTTGTTGTGTGGAAAGGGCA]
[-] EMBL CD152856 [ GCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCTTGTGTATTAACTTACAGTTTCCTCGTGAGGTTAAGCTTTACAAACTACTACTACAACGTAAAATTCATTCTATTATCATTTACAC ATTTC ]
[-] EMBL CD152755 [ TCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ]
consensusID : consensus_11039#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 289 fasta sequence
[NGCCGTGGCNCAACTCGCCTGTTCAGTTGGGAACAATGCGATAAGGCTGCTAACTTGTTTGAAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGAATTTAATCAATGGTCAGAAAAGCGCTCAAAACCTATGAAANAAATGTTATCCTATGTTTTGGCTGAACTCCAGAANAGTGTGCTTTGAATGAAANAAAATTATCAGAGGGCTTTGGAAACAAGAAGAATGTTA]
[+] EMBL AA559362 [NGCCGTGGCNCAACTCGCCTGTTCAGTTGGGAACAATGCGATAAGGCTGCTAACTTGTTTGAAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGAATTTAATCAATGGTCAGAAAAGCGCTCAAAACCTATGAAANAAATGTTATCCTATGTTTTGGCTGAACTCCAGAANAGTGTGCTTTGAATGAAANAAAATTATCAGAGGGCTTTGGAAACAAGAAGAATGTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11039#0 AGCGGTTGTTTCGAACTGCAGGCAACTATTAAGTAATGGATGAAAACGAAAAGAAAGCGA 60
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 GAGAACTAATTGCTGAGGCACAAAAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAG 120
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 GTTCGGACAAGACAGATGAAGCAATATCCTTGTATGAAAAAGCGGGAAATTGTTTTAAGA 180
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 TGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGA 240
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 GCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGA 300
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 AGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGA 360
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 TGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGG 420
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 ACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGG 480
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 GTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGT- 539
consensus_11039#1 -------------------------------------NGCCGTGGCNCAACTCGCCTGTT 23
******** ************
consensus_11039#0 CAGTTGGGA-CAATGCGATAAGGCTGCTAACTTGTTTGAA-GAGGCTGGTAAAGCGTCAA 597
consensus_11039#1 CAGTTGGGAACAATGCGATAAGGCTGCTAACTTGTTTGAAAGAGGCTGGTAAAGCGTCAA 83
********* ****************************** *******************
consensus_11039#0 TGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTC 657
consensus_11039#1 TGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTC 143
************************************************************
consensus_11039#0 ATTTCTGTGTGGA-TTTAATCAATGGTCAGAAA-GCGCTCAAAACCTATGAAGAA--TGT 713
consensus_11039#1 ATTTCTGTGTGGAATTTAATCAATGGTCAGAAAAGCGCTCAAAACCTATGAAANAAATGT 203
************* ******************* ****************** * ***
consensus_11039#0 TATCCTATGTTT--GCTGA-CTCCAGA-GAGTGTGCTTTGAT---GAAGAAATTATCAGA 766
consensus_11039#1 TATCCTATGTTTTGGCTGAACTCCAGAANAGTGTGCTTTGAATGAAANAAAATTATCAGA 263
************ ***** ******* ************ * ***********
consensus_11039#0 GG-CTTTGGAA-CAAGA-GAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAA 823
consensus_11039#1 GGGCTTTGGAAACAAGAAGAATGTTA---------------------------------- 289
** ******** ***** ******
consensus_11039#0 TATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAGCTTAAGAAAACAATAAG 883
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 TGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAAT 943
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 AATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGT 1003
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 CTATTTTTTTGAGTTACCATTCATTTTTCTGAACTTATATATGTGCAATACACTATTTTC 1063
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 CTCCATCTTGCACTTACAATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCT 1123
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 TGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC 1183
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 ATTTCCGTATTTTCCTCTTTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACA 1243
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 AGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCT 1303
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 TTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACA 1363
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 ATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTC 1423
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 TTCTGACAGTGGATTTAACTTACATAGTAATTGTATGATATCAGCGCTCACTTAACTATA 1483
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 CTAAAAAAAACTTGGCCTATACATTTTTTATTGGGTTCTAAATGTTAATGTCCTTATATA 1543
consensus_11039#1 ------------------------------------------------------------
consensus_11039#0 GTGTTTGTTGTGTGGAAAGGGCA 1566
consensus_11039#1 -----------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||