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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11044#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1553 fasta sequence
[TCTTGGTTCCTCCTGTTAGTCTAGTACTTTGCTATATAGAAAACTTCGAACATTGACGTATTACCTTTCTCGAAACTTCGTCTATATTAATCTTCTTCTCAAGATTTGTTTGAAGTGAATATCAGGCTTTCATCAAACAATAAACACTCGATTCACATAATAAAAATGGCGTCAGGTCTTGCTAGATCAAAGCTGATGAATTTTGTTTTTAGGTCTCCGTGGAACCCCGTGTCACTCATCTATCGTCCTGAGTGTTCCTCCGCAAAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTAGATTCCACACCAGCAAATGAAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAGAGTCTTCACCGTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTTATTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAAGCAGTTGCAGTCGGTATTGAAGCTGCTTTACAG-CCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATG-ACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACAAAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAAT-GGCATCGTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAAAAGTTTGTCTCTGTAACTCTT-TATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAG-GAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTTCTAAGGTACGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATTTTATAACTTATATCCTCTAAAATACAAACTTATACTATAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BF936614 [TCTTGGTTCCTCCTGTTAGTCTAGTACTTTGCTATATAGAAAACTTCGAACATTGACGTATTACCTTTCTCGAAACTTCGTCTATATTAATCTTCTTCTCAAGATTTGTTTGAAGTGAATATCAGGCTTTCATCAAACAATAAACACTCGATTCACATAATAAAAATGGCGTCAGGTCTTGCTAGATCAAAGCTGATGAATTTTGTTTTTAGGTCTCCGTGGAACCCCGTGTCACTCATCTATCGTCCTGAGTGTTCCTCCGCAAAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTAGATTCCACACCAGCAAATGAAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAGAGTCTTCACCGTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTTATTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAAGCAGTTGCAGTCGGTATTGAAGCTGCTTTACAG CCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATGAACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGC CAAAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAATGGGCATC ]
[+] EMBL AI975822 [TCTTGGTTCCTCCTGTTAGTCTAGTACTTTGCTATATAGAAAACTTCGAACATTGACGTATTACCTTTCTCGAAACTTCGTCTATATTAATCTTCTTCTCAAGATTTGTTTGAAGTGAATATCAGGCTTTCATCAAACAATAAACACTCGATTCACATAATAAAAATGGCGTCAGGTCTTGCTAGATCAAAGCTGATGAATTTTGTTTTTAGGTCTCCGTGGAACCCCGTGTCACTCATCTATCGTCCTGAGTGTTCCTCCGCAAAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTAGATTCCACACCAGCAAATGAAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAGAGTCTTCACCGTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTTATTCGTGGTTTCTGTCATCTATACTCGGGTCANGGAGCAGTTGCAGTCGGTATTGAAGCTGCTTTACAGCCCAGGCG ]
[-] EMBL CD156236 [ CGTCTATATTAATCTTCTTCTCAAGATTTGTTTGAAGTGACTATCAGGCTTTCATCAAACAATAAACACTCGATTCACATAATAAAAATGGCGTCAGGTCTTGCTAGATCAAAGCTGATGAATTTTGTTTTTAGGTCTCCGTGGAACCCCGTGTCACTCATCTATCGTCCTGAGTGTTCCTCCGCAAAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTAGATTCCACACCAGCAAATGGAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAGAGTCTTC ]
[+] EMBL CD150269 [ CTTTCATCAAACAATAAACACTCGATTCACATAATAAAAATGGCGTCAGGTCTTGCTAGATCAAAGCTGATGAATTTTGTTTTTAGGTCTCCGTGGAACCCCGTGTCGCTCATCTATCGTCCTGAGTGTTCCTCCGCAAAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTAGATTCCACACCAGCAAATGAAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAGAGTCTTCACCGTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTTATTCGCGGTTTCTGTCATCTATACTCGGGTCAGGAAGCAGTTGCAGTCGGTATTGAAGCTGCTTTACAG CCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATG ACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGAC ]
[-] EMBL CD155319 [ AAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTAGATTCCACACCAGCAAATGAAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAGAGTCTTCACCGTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTTATTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAAGCAGTTGCAGTCGGTATTGAAGCTGCTTTACAG CCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATG ACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACAAAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAAT GGCATCGTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAAAAGTTTGTCTCTGTAACTCTT TATGGAGATGGTG ]
[-] EMBL CD145719 [ GTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTTATTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAAGCAGTTGCAGTCGGTATTGAAGCTGCTTTACAG CCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATG ACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACAAAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAAT GGCATCGTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAAAAGTTTGTCTCTGTAACTCTT TATGGAGAAGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAACGAAGTTAAGGAATCTTCCTGTGATATTCGTTTG ]
[+] EMBL CD080746 [ GTTGCAGTCGGTATTGAAGCTGCTTTACAG CCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATG ACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACAAAAGGTTTAGGGGGCAGTATGCATCTTTACACGAAAGATTTCTATGGAGGTAAT GGCATCGTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAAAAGTTTGTCTCTGTAACTCTT TATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATC ]
[+] EMBL CD131650 [ TACGCGAAAGATTTCTATGGAGGTAAT GGCATCGTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAAAAGTTTGTCTCTGTAACTCTT TATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGAC AAGGACCAAT ]
[+] EMBL CD131579 [ TACGCGAAAGATTTCTATGGAGGTAAT GGCATCGTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAAAAGTTTGTCTCTGTAACTCTT TATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTCACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTT ]
[+] EMBL CD090337 [ TCGTGGGGAAAAGTTCGTCTCTGTAACTCTT TATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCAGTGATTTTCATTTGTGACAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTGGTTACTATACTCGTGGAGATTACATTCCTGGATNGTGGGTTGATGGTATGGATATACTTACTG ]
[-] EMBL CD090406 [ gtGGGAAAAGTTTGTCTCTGT ACTCTTANNTGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTCCCACAGTAATcata ]
[-] EMBL CD074671 [ gTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAG GAGATCGAAAAAAGGGTCAGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTTTTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTTCTAAGGTACGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATGAATAATTTTATAACTTATATCCTCTAAAATACAAAC ]
[-] EMBL CD075077 [ GACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAG GAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTCCTAAGGTACGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATTTTATAACTTATATCCTCTAAAATACAAAC ]
[-] EMBL AI395292 [ ccaGTGGAGGAGTTCCGTCGATGAGGCGTGGACGAGAT CTATCGCTTTATTCCAGAGGAGCATTGTAGACAATGGGCTATGTACACAGGATGA GTTAAGTGAGATCGAAAAAAGAGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTCCTAAGGTACGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATTTTATAACTTATATCCTCTAAAATACAAACTTATACTATAAAAAAAAAAAAAAAAA ]
[-] EMBL AI395033 [ tTAGACAATGGGCTATGTACACAGGATGAGGTTAAG GAGATCGAAAAAAGGGTCTGATGTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTTCTAAGGTACGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATTTTATAACTTATATCCTCTAAAATACAAACTTATACTATAAAAAAAAAAAAAAAA ]
[-] EMBL AI395531 [ ATAATTTTCATGGGATACCCCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTTTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTTCTAAGGTACGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATTTTATAACTTATATCCTCTAAAATACAAACTTATCCTTTTAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11044#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 819 fasta sequence
[CCTCGAGGCCAAAAATTCGGCACGAGGTGTCTCTGTAACTCTTTATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTNTTAGTATTTCCTAAGGTACGAANTATCACANATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATNTTATAAACTATATCCTCTAAAATACA]
[+] EMBL CD081247 [CCTCGAGGCCAAAAATTCGGCACGAGGTGTCTCTGTAACTCTTTATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAAGAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTNTTAGTATTTCCTAAGGTACGAANTATCACANATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATNTTATAAACTATATCCTCTAAAATACA]
[-] EMBL CD149680 [ tgGTCTCTGTAACTCTTTATGAAGATGGTGCAGCTAACAAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAG ]
[+] EMBL CD093992 [ ACTCTTTATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTNTGGAAATATTTATCATGGGATACCTCC ]
[+] EMBL CD170283 [ TCTTTATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGT ]
[-] EMBL CD090407 [ AGATGGTGCAGCTANCCAGGGACAGGTGTTTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGA ]
[+] EMBL CD111143 [ TTGAGGCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCT ]
[-] EMBL CD186581 [ GGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAATATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTGCATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGAGGA ]
[-] EMBL CD130764 [ CATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGAGATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTATATTCCAGAAGAGCATCGTAGACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTC ]
[+] EMBL CD131389 [ GTATGGATATACTTACTGTTAGAGAAGCCACACGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGAACCAATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTT ]
[+] EMBL CD146404 [ AATACTGTTAGAAACAGAGACTTATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAA ]
[-] EMBL CD168435 [ GACCCAGGCATTAGTTATCGTACACGTGAAGAAGTTCAGTCGATGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAGACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAGAA ]
[-] EMBL CD094008 [ ATGAGCGACTCAGAACCACCACTAGAGACGATGTTTGGAAATATTTATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAACTTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTC ]
consensusID : consensus_11044#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 377 fasta sequence
[AAAGTTTTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAGCAGTTGCAGTCGGTATTGAAGTGCTTTACAGCCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTAACAATGACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACAAAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAATGGCATCGTTGGCGCCCAGGTATATTTGTTTGTTTACCGTATAATATTTTGACTTCATGATTTCAATTAGGGATTCTTCATACACAACTTCTCAGCATTAATTTTCAGATTAAATGTATTTACGTTATGTAAAAAAAAAAA]
[-] EMBL AI395607 [AAAGTTTTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAGCAGTTGCAGTCGGTATTGAAGTGCTTTACAGCCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTAACAATGACTCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACAAAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAATGGCATCGTTGGCGCCCAGGTATATTTGTTTGTTTACCGTATAATATTTTGACTTCATGATTTCAATTAGGGATTCTTCATACACAACTTCTCAGCATTAATTTTCAGATTAAATGTATTTACGTTATGTAAAAAAAAAAA]
consensusID : consensus_11044#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 296 fasta sequence
[TGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAAACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATNAAGAAGTAGAGAAGGCGATGAGCGACTCATTANCCNCCNCTAGAGACGATGTTTGGAAATATTTATCATGGGATNCCTCCAAACTACANNATTCGAGGTTGCGATCTAAAAACTTGGGGTTCNCCNNTTGTCACTNAGTGGTGAGGTAACCTCNCGTTTTCTGANTTTTGACTAAANCTGGT]
[+] EMBL AA559468 [TGAGGCGTGGACGAGATCCTATCGCTTTATTCCAGAAGAGCATTGTAAACAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGTAGATNAAGAAGTAGAGAAGGCGATGAGCGACTCATTANCCNCCNCTAGAGACGATGTTTGGAAATATTTATCATGGGATNCCTCCAAACTACANNATTCGAGGTTGCGATCTAAAAACTTGGGGTTCNCCNNTTGTCACTNAGTGGTGAGGTAACCTCNCGTTTTCTGANTTTTGACTAAANCTGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 TCTTGGTTCCTCCTGTTAGTCTAGTACTTTGCTATATAGAAAACTTCGAACATTGACGTA 60
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 TTACCTTTCTCGAAACTTCGTCTATATTAATCTTCTTCTCAAGATTTGTTTGAAGTGAAT 120
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 ATCAGGCTTTCATCAAACAATAAACACTCGATTCACATAATAAAAATGGCGTCAGGTCTT 180
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 GCTAGATCAAAGCTGATGAATTTTGTTTTTAGGTCTCCGTGGAACCCCGTGTCACTCATC 240
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 TATCGTCCTGAGTGTTCCTCCGCAAAATTTAGTCTTTCTGACTACAAGTCTTTTAAGTTA 300
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 GATTCCACACCAGCAAATGAAACTGAATGCAGTCGTGATGATGCACTTAGATACCTCGAG 360
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 AGTCTTCACCGTATTCGTAGAATGGAAACGGCATTAGGTAACATGTATAAAGAAAAGCTT 420
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 ATTCGTGGTTTCTGTCATCTATACTCGGGTCAGGAAGCAGTTGCAGTCGGTATTGAAGCT 480
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 GCTTTACAGCCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTTACAATGACT 540
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 CGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAAGACTGGATGCACA 600
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 ------------------------------------------------------------
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 AAAGGTTTAGGGGGCAGTATGCATCTTTACGCGAAAGATTTCTATGGAGGTAATGGCATC 660
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 --------------------------------------CCTCGAGGCCAAAAATTCGGCA 22
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 GTTGGCGCCCAGGTTCCTTTGGGTGTTGGAATAGCATTACGTATGAAACATCGTGGGGAA 720
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 CGAGGTGTCTCTGTAACTCTTTATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAG 82
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 AAGTTTGTCTCTGTAACTCTTTATGGAGATGGTGCAGCTAACCAGGGACAGGTGTTTGAG 780
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 GCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAA 142
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 GCCTTTAATATAGCGAAGTTATGGAATCTTCCTGTGATTTTCATTTGTGAAAACAATAAA 840
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 TATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGA 202
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 TATGGTATGGGTACATCTGTGCAGCGCTCTTCGGCCAATACTAGTTACTATACTCGTGGA 900
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 GATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACA 262
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 GATTACATTCCTGGATTGTGGGTTGATGGTATGGATATACTTACTGTTAGAGAAGCCACA 960
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 CGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACT 322
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 CGTTTTGCTGCTGATTGGTGTCGTTCTGACAAAGGACCAATACTGTTAGAAACAGAGACT 1020
consensus_11044#2 -------------------------------------------------------AAAGT 5
consensus_11044#1 TATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAA 382
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 TATCGTTACCATGGTCATAGTATGAGCGACCCAGGCACTAGTTATCGTACACGTGAAGAA 1080
consensus_11044#2 TTTCGTGGTTTCTGTCATC-TATACTCGGGTCAGGAGC-AGTTGCAGTCGGTATTGAAGT 63
consensus_11044#1 GTTCAGTCGATGAGGCGTGGACGAGATC-CTATCGCTTTATTCCAGAAGAGCATTGTAGA 441
consensus_11044#3 ----------TGAGGCGTGGACGAGATC-CTATCGCTTTATTCCAGAAGAGCATTGTAAA 49
consensus_11044#0 GTTCAGTCGATGAGGCGTGGACGAGATC-CTATCGCTTTATTCCAGAAGAGCATTGTAGA 1139
consensus_11044#2 GCTTTA-CAGCCAGGCGATACTATTATCACTGCTTATCGCTGCCATGGCTTAACAATGAC 122
***** *** ** * * *** * *
consensus_11044#1 CAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGT 501
consensus_11044#3 CAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGT 109
consensus_11044#0 CAATGGGCTATGTACACAGGATGAGGTTAAGGAGATCGAAAAAAGGGTCCGAATTGAAGT 1199
consensus_11044#2 TCGCGGTGTTCCTATCCACAATATAGTTGCAGAACTCGCAGGAAGGAA--GACTGGATGC 180
** * ** ** ** *** ** *** * **** ** * ** *
consensus_11044#1 AGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAG-AACCACCACTAGAGACGATGTTTG 560
consensus_11044#3 AGATNAAGAAGTAGAGAAGGCGATGAGCGACTCATTANCCNCCNCTAGAGACGATGTTTG 169
consensus_11044#0 AGATAAAGAAGTAGAGAAGGCGATGAGCGACTCAG-AACCACCACTAGAGACGATGTTTG 1258
consensus_11044#2 A---CAAAAGGTTTAGGGGGCAGTATGCATCTTTA-------CGCGAAAGATT-TCTATG 229
* ** * ** ** *** * ** ** * * * *** * * **
consensus_11044#1 GAAATATT--TATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAAC 618
consensus_11044#3 GAAATATT--TATCATGGGATNCCTCCAAACTACANNATTCGAGGTTGCGATCTAAAAAC 227
consensus_11044#0 GAAATATT--TATCATGGGATACCTCCAAACTACAAGATTCGAGGTTGCGATCTAAAAAC 1316
consensus_11044#2 GAGGTAATGGCATCGTTGGCGCCCAGGTATATTTGTTTGTTTACCGTATAATATTTTGAC 289
** ** * *** * ** ** * * * * * ** * **
consensus_11044#1 TTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAA- 677
consensus_11044#3 TTGGGGTTCNCCNNTTGTCACTNAGTGGTGAGGTAACCTCNCGTTTTCTGANTTTTGACT 287
consensus_11044#0 TTGGGGTTCACCATTTGTCACTAAGTGGTGAGGTAGCTTCACGTTTTCTGAATTTTGAA- 1375
consensus_11044#2 TTCATGATTTCAATTAGGGATTCTTCAT--ACACAACTTCTCAGCATTAATTTTCAGATT 347
** * * * * * * * * * * ** * * ** **
consensus_11044#1 GAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTNTTAGTATTTCCTAAGGTA 737
consensus_11044#3 AAANCTGGT--------------------------------------------------- 296
consensus_11044#0 GAAGCTGGTTATTATATACTATCTAATTTATTAGTCAGGCTTTTAGTATTTTCTAAGGTA 1435
consensus_11044#2 AAATGTATTTACGTTATGTAAAAAAAAAAA------------------------------ 377
** * *
consensus_11044#1 CGAANTATCACANATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATNTTAT 797
consensus_11044#3 ------------------------------------------------------------
consensus_11044#0 CGAATAATCACAAATATTTGATCCTTTCATAACAGCCTGTGTACCTATAAATAATTTTAT 1495
consensus_11044#2 ------------------------------------------------------------
consensus_11044#1 AAACTATATCCTCTAAAATACA------------------------------------ 819
consensus_11044#3 ----------------------------------------------------------
consensus_11044#0 AACTTATATCCTCTAAAATACAAACTTATACTATAAAAAAAAAAAAAAAAAAAAAAAA 1553
consensus_11044#2 ----------------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||