These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11078#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 2482 fasta sequence [TTGATTATTTGTATCGAAATCAAAGTCTATGTTTGGTGAATTTGTTGAATGAATAGTTCTACGTTCTGGTGTAAGCCTAGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGCCTGGCTAGTTGATGTCCCCATTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTTGTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCATAGCTGAGTTGGAGTACGGTGATGATTTCGTGTTAGCACCCAGACCTTGTGAAGTGATAGGAATGGGTTTTCTCTGGCCGGCAGTAGTTGGACGAACCGTGCTGGTACCTGCATCAATACTTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGACCCAGAAGTGCAAGATGAGGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTGTAGAACGAGTGGCACTTCCAGGATTGACCGTAAATTTCGAGCTTGAATGTGCGTTTTGA-TTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC-GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA-TTAAGGACCAACA-TTTTCTTCAAC-AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTTCAAATAGTTTTACGATGTTTGGATGGTCCAGCAATTTCATCAGTCTAACTTCTCGGAAAAGCTTTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTTGGCCCGTAATAACATGACTAGCTAAT] [+] EMBL CD059335 [TTGATTATTTGTATCGAAATCAAAGTCTATGTTTGGTGAATTTGTTGAATGAATAGTTCTACGTTCTGGTGTAAGCCTAGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGCCTGGCTAGTTGATGTCCCCATTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAA ] [+] EMBL CD189219 [ GTCCCCATTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTGCTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGGGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGg ] [+] EMBL CD147844 [ CTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTTGTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCATAGCTGAGTTGGAGTACGGTGATGATTTCGTGTTA ] [+] EMBL CD123382 [ GTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGC ] [+] EMBL CD123432 [ GTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATTAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGC ] [+] EMBL CD123447 [ GTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATTAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGC ] [-] EMBL CD183356 [ ATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTTGTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCATAGCTGAGTTGGAGTTTGGTGATGATTTCGTGTTAGCACCCAGACCTTGTGAAGTGATAGGAATGGGTTTTCTCTGGCCGGCAGTAGTTGGACGAACCGTGCTGGTACCTGCATCAATACTTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGA ] [-] EMBL CD170145 [ GAACCGTGCTGGTACCTGCATCAATACTTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGACTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCACTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTCGTAGATGCCAAACTGACAGGTGAAATGGGACTTA ] [-] EMBL CD095524 [ TTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATT TTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTG ] [+] EMBL CD189100 [ ATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGACCCAGAAGTGCAAGATGAGGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTGTAGAACGAGTGGCACTTCCAGGATTGACCGTAAATTTCGAGCTTGAATGTGCGTTTTGA TTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCCNGCAGaaa ] [+] EMBL CD097621 [ ATGAAGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGGGGTGTTGTACTTGTAGAACGAGTGGCACTTCCAGGGTTGACgga ] [-] EMBL CD181663 [ GTAAATTTCGAGCTTGAATGTGCG TTTGATTTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTT ] [-] EMBL CD189447 [ CAGCATNTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATNTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAACCACGTTCACGCAATT ] [+] EMBL CD128108 [ AACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGGCCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACAT ] [+] EMBL CD127783 [ tacttTCGTCTGGGCGAATATTTGAGGTCTGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAACCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACAT ] [+] EMBL CD155713 [ CATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCT AGCG ] [+] EMBL CD184880 [ TCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAG ] [+] EMBL CD119998 [ CATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACT AATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATNTTCGGCTTTTAAATCTCTGTGAAT ATATGTTT ] [-] EMBL CD158276 [ ATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTCGTGCCTGGACTAAACTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCA ] [-] EMBL CD120476 [ TCCAACGATCTTTCATCACCATCTCTAAAGTGTATCG TTACTNGGANTTAAGGACC ACATTTTTCTTCANCNAAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGC ATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGGCTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTT ] [-] EMBL CD112417 [ CAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCTACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCA ] [-] EMBL CD120105 [ CAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAGTTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTT ] [+] EMBL CD067585 [ TTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTTCAAATAGTTTTACGATGTTTGGATGGTCCAGCAATTTCATCAGTCTAACTTCTCGGAAAAGCTTTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTTGGCCCGTAATAACATGACTAGCTAAT] [+] EMBL CD067584 [ TTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTATAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGCGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTTCAAATAGTTTTACGATGTTTGGATGGTCCACCAATTTCATCAGTCTAACTTCTCGGAAAAGCATTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTTGGCCCGTAATAACATGACTAGCTAAT] [-] EMBL CD120434 [ GAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAAT ] [-] EMBL CD120144 [ GAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAAT ] consensusID : consensus_11078#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 487 fasta sequence [CATCAGTANAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGGCCCAGAAGTGCAAGCTGACAAAGAGATAAAGGAAGTAGATAACGATTGTATGCTAACAATACATCGATGGTCTATATTATGCAGAATGATATACAGCAATAATGTATCAAATAAATCTAATAAAACTGAAAAAATAATTACATGAAGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTG] [-] EMBL CD097350 [CATCAGTANAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGGCCCAGAAGTGCAAGCTGACAAAGAGATAAAGGAAGTAGATAACGATTGTATGCTAACAATACATCGATGGTCTATATTATGCAGAATGATATACAGCAATAATGTATCAAATAAATCTAATAAAACTGAAAAAATAATTACATGAAGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTG] consensusID : consensus_11078#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 459 fasta sequence [GTCCCCATTCTAAGCGAACTATACGTTAAATCGTTGCGATTGAAAGATGTTACAGCATGATCGTTGACTCCGCTTCGACCGGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGA] [+] EMBL CD188567 [GTCCCCATTCTAAGCGAACTATACGTTAAATCGTTGCGATTGAAAGATGTTACAGCATGATCGTTGACTCCGCTTCGACCGGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAGGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAG ] [-] EMBL CD183548 [ TCCCCATTCTAAGCGAACTATACGTTAAATCGTTGCGATTGAAAGATGTTACAGCATGATCGTTGACTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGT ATTCTCCAGCCCCAACTACATCACCTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGGAGGCGATAAAGCAGATCCACCAGAAAGA] [-] EMBL CD114638 [ TGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTC ] consensusID : consensus_11078#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 293 fasta sequence [AGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGTCTGGCTAGTTGATGTCCCCATTCTGGAATAGAATTAAAAATTTGTTTTCATTAAAGGGTAAACAATAGATTAGGAAATTAAATATATAATTCAGGAAGGTGGTATTCAACTACATTATTGTGTTAAAGATCGGACATCGATAAACCGAAACGAAAACATTCGCACATTGAATAAAA] [+] EMBL CD188909 [AGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGTCTGGCTAGTTGATGTCCCCATTCTGGAATAGAATTAAAAATTTGTTTTCATTAAAGGGTAAACAATAGATTAGGAAATTAAATATATAATTCAGGAAGGTGGTATTCAACTACATTATTGTGTTAAAGATCGGACATCGATAAACCGAAACGAAAACATTCGCACATTGAATAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11078#0 TTGATTATTTGTATCGAAATCAAAGTCTATGTTTGGTGAATTTGTTGAATGAATAGTTCT 60 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 ACGTTCTGGTGTAAGCCTAGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTT 120 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 -----------------------------------------------------CATCAGT 7 consensus_11078#0 AAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGT 180 consensus_11078#2 ---------------------GTCCCCATTC-TAAGCGAACTATACGTTA-AATCGTTGC 37 consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ANAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGC 67 consensus_11078#0 AGTGTGACAACCCGCCTGGCTAGTTGATGTCCCCATTCCGCTTCGACCTGCAATATTGGC 240 consensus_11078#2 GATTGAAAGATGTTACAGCATGATCGTTG-----ACTCCGCTTCGACCGGCAATATTGGC 92 consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGC 127 consensus_11078#0 ACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGA 300 consensus_11078#2 ACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGA 152 consensus_11078#3 -----------------------------------------------------AGGGAAA 7 consensus_11078#1 TTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATA 187 * * * consensus_11078#0 AGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGT 360 consensus_11078#2 AGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGT 212 consensus_11078#3 GGTGTAGTC-TCTAAGATAGTTCCTATACCATTG---TTAAATCCTGAAG-ACGTGTTAT 62 consensus_11078#1 TGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGT 247 * * * * * * * * * * consensus_11078#0 TGCGGATCTTTCCAATAATA-AACCTGCATGATAAGCGCCACCAGTACCACTAGATATAT 419 consensus_11078#2 TGCGGATCTTTCCAATAATA-AACCTGCATGATAAGCGCCACCAGTACCACTAGATATAT 271 consensus_11078#3 TATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGTCTGGC 122 consensus_11078#1 TCCTGAACTTTCCGGCCCAGAAGTGCAAGCTGACAAAGAGATAAAGGAAGTAGATAACGA 307 * * *** * * * consensus_11078#0 TTGCACCATGATG-TACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACA 478 consensus_11078#2 TTGCACCATGATG-TACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACA 330 consensus_11078#3 TAGT----TGATG-TCCCCATTCTG---GAATAGAATTAAAAATT--TGTTTTCATTAAA 172 consensus_11078#1 TTGTATGCTAACAATACATCGATGGTCTATATTATG-CAGAATGATATACAGCAATAATG 366 * * * * * * * * * * * * * consensus_11078#0 TGGCTTCGAA-TTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTT 537 consensus_11078#2 TGGCTTCGAA-TTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTT 389 consensus_11078#3 GGGTAAACAA-TAGATTAGGAAATTAAATATATAATTCAGGAAGGTGGTATTCAACTA-- 229 consensus_11078#1 TATCAAATAAATCTAATAAAACTGAAAAAATA-ATTACATGAAGGAGTGATTATATT--- 422 ** * * * ** * * * * * * * * * consensus_11078#0 AGCACTTCCGCTTGATGACCCAGATGTAGATTTATC-AGATGAAGGCGATAAAGCAGATC 596 consensus_11078#2 AGCACTTCCGCTTGATGACCCAGATGTAGATTTATC-AGATGAAGGCGATAAAGCAGATC 448 consensus_11078#3 --CATTATTGTGTTAAAGATCGGACATCGATAAACCGAAACGAAAACATTC--GCACATT 285 consensus_11078#1 --CACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTT 480 ** * * * ** * * * * consensus_11078#0 CACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAA 656 consensus_11078#2 CACCAGAAAGA------------------------------------------------- 459 consensus_11078#3 GAATAAAA---------------------------------------------------- 293 consensus_11078#1 GTACTTG----------------------------------------------------- 487 consensus_11078#0 ATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTT 716 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCA 776 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TAGCTGAGTTGGAGTACGGTGATGATTTCGTGTTAGCACCCAGACCTTGTGAAGTGATAG 836 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GAATGGGTTTTCTCTGGCCGGCAGTAGTTGGACGAACCGTGCTGGTACCTGCATCAATAC 896 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAG 956 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTAC 1016 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTAC 1076 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTC 1136 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTG 1196 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TACTGGTACCTGTAGTTCCTGAACTTTCCGACCCAGAAGTGCAAGATGAGGGAGTGATTA 1256 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTG 1316 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TTGTACTTGTAGAACGAGTGGCACTTCCAGGATTGACCGTAAATTTCGAGCTTGAATGTG 1376 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CGTTTTGATTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTG 1436 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTG 1496 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GACTAGCCGCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGAC 1556 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAG 1616 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGA 1676 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 AACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTA 1736 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCA 1796 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TCTCTAAAGTGTATCGTTTACTTGGATTAAGGACCAACATTTTCTTCAACAAACTTTCGC 1856 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 AGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATT 1916 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACAC 1976 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGG 2036 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAG 2096 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 AAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTT 2156 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 TTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGAC 2216 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAA 2276 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTT 2336 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 CAAATAGTTTTACGATGTTTGGATGGTCCAGCAATTTCATCAGTCTAACTTCTCGGAAAA 2396 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GCTTTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTT 2456 consensus_11078#2 ------------------------------------------------------------ consensus_11078#3 ------------------------------------------------------------ consensus_11078#1 ------------------------------------------------------------ consensus_11078#0 GGCCCGTAATAACATGACTAGCTAAT 2482 consensus_11078#2 -------------------------- consensus_11078#3 -------------------------- consensus_11078#1 -------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||