These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11083#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1684 fasta sequence [CAGACTCATACAATATCAGTCCAAGCAAAGATTGCCATCCTACAACAAATAACACTGGATCACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATACTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTACAAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGGCAGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC-AAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA-TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC-AGGAAAATA-CTCCCGTGAATATTTTGATAAACG-AGCTTGTTTACGTCATATACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC-AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA-GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTACCAGATCTCAGTCC] [+] EMBL CD192244 [CAGACTCATACAATATCAGTCCAAGCAAAGATTGCCATCCTACAACAAATAACACTGGATCACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATACTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTACAAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGGCAGCAGCTG ] [+] EMBL CD120631 [ ATTGCCATCCTACAACAAATAACACTGGATCACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATACTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTACAAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGC ] [+] EMBL CD195766 [ CAGAAGAAAGTGATCAATTTGTACAAAAGGACAGTGAAAGTGGCAGTGGACTGGCTGTTCGCCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAA ] [+] EMBL CD195654 [ GCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAGATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCACAGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGGCGGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTn ] [+] EMBL CD197443 [ ATCATTCAACCAGATGGGCTTTTGGCAGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGACTAAATCAACTCTGACAGCAAAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTG ] [+] EMBL CD192858 [ CAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAAACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC AAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGG ] [+] EMBL CD194235 [ GAATTTCACGAACTCAAGGTCAAATGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC AAACAGTACCGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCA ] [-] EMBL CD171089 [ GTCAAAGGGAACTGAAGGAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGC AAACAGTACTGGTGAAGGTAGCTCCAAACGGTCGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCAC ] [-] EMBL CD155042 [ GACAGC AAACAGTACTGGTGAAGGTAGCTCCAAACGGTTGAGTTTGGTTGCACCATCTAATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATC ] [+] EMBL CD128115 [ AATAACAATTCAGCTTCTGGTCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACA ] [-] EMBL CD195985 [ ACTGTGATACATGANCCTGATGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTA TCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATCTTGATAAACG AGCTTGTTTACGTCATATACATCG ] [-] EMBL CD063471 [ GTGATACATGAACCTGATGCTAGTAAAGAGCCATGTAATATTGAAGTGAAAATCGCCGATTTGGGTAATGCATGCTGGACTTATCGTCATTTTACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTTCTCATTGGCTCCGAATATGGACCACCCGCAGATATTTGGAGTACGGCTTGTATGGCTTTTGAATTGGCTACGGGTGATTATTCTTTTCGAAC ] [-] EMBL CD195649 [ TTTCGAACCTCATTCTGGCGAAGATTATACACGAGATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATCG ] [-] EMBL CD137462 [ ATA TGCTCCTTCAAGGAAAATACCTCCCGTGAATATTTTGAT TACGAAGCTTGTNTACGTCATATACATCGCTTGAAACC TGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGga ] [+] EMBL CD137488 [ TTGCTCTTTC AGGAAAATA CTCCCGTGAATATTTTGATAAACG AGCTTGTTTACGTCATATACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC AATGCTCGCCTATGATCCTGATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATA ] [+] EMBL CD115310 [ ACATCGCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTGAAGCGGCTCTTTTCACCAGTTTTTTGGAACC AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTTCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATAT ] [+] EMBL CD068164 [ gaTGGCCACCAAG GAAGCGGCTCTTTTCACCAG TTTTTGGAACC AATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATT ] [-] EMBL CD182463 [ ACCAAATGCTCGCTTATGATCCTAATAAAAGAGCTTCCGCGTGGGATTGTTTACAACATTCCTGGATAACTGGTCAACCGTATTCCCCATCAGTTGA GGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTC ] [-] EMBL CD120178 [ gTGANGGAAGGCCTACCAAATCATATCCCATTNGGAGTGAATATGCCAGATCCATTGATGGGTGACGTCTTATCTAATCCTAGTACATATTACCATCCACATATCAATCAACCAAATGTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATAT ] [+] EMBL CD192206 [ GTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTACCAGATCTCAGTCC] [+] EMBL CD192264 [ GTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAACAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTACCAGATCTCAGTCC] [+] EMBL CD166488 [ acACAATAT CGACAG TCA TGCGTTGCTCCACAATCCAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTCTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAATAAAATTG ] [-] EMBL CD181935 [ CCGACAGTTCANTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTACATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTATGGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGATTCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGCAATGTGGATGGTACAA ] consensusID : consensus_11083#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 999 fasta sequence [GCCTAACCATGTAGGATTTCGCTCGTCGTTTTGAATGGACGACATCTTAGTAGGGTTATTAATGGGAGCTGTTTTGTCCTCCAAAATACTGCTGCAAGCCTTGAATGGAATGGAGATTGCGTAGCCTAACACCGAGACAACAGCACGCGCAGTATCCATAAACACTGAACCAACAGTGTTATTTGTTGTAGGATGGCAATCTTTGCTTGGACTGATATTGTATGAGTCTGTTGTTGGGGGAGTAGTATTAACCTCATTCGAGTATGACTGTTCTGGGGATATTTCTGAATCCCTTTTAGGTTTTTCATCCACTTGTTCTGGCTCTTCATGGTTTTGTTCACTGTCAGCAGGAATCAGTCCCATATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTGTTCTAAAAGTGCTTGTTGTTTTCTTTGTTGCTTTTTTAGACGGCGCTTGCGACTTTTTGTCATCTTCGTGTTATCTTGTTTTTCTTTGGGTGCAGTGCTCACTGCAGAACCTGACAGCTGTACACCTCGCCTTTGAGCATCGAGGGCCTCCGCTGCCATCCTACGAATTTGAGAATCAGAAATACAAACCAAAATGTTTTCCGGTTTGATATCTGTATGAATAATGTGACACTTTGTGTGCAAGTAGTGAAGTCCTTGAAGGGTTTGTTTAATAATAGAACGAACATTTTCGAGCGGAATGCCTCGGTACTGAGACCTGATTATAAGCTTTAATAAATTATGGCCAAGAACCTCAAATATCATACAGACATGGTTCCCATTTACACCAGACACTCTGAAATCATCTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCACGGACGCATGACAGCAGCTTGATTTCATCAAGAGCTGTTTCTGTGTAGTGCGGAGCACTCTTGACTACTTTCATTGCAACGAAACGTTTTGAACATAAATCCCAGCATAACCACACAGTGGA] [+] EMBL CD119168 [GCCTAACCATGTAGGATTTCGCTCGTCGTTTTGAATGGACGACATCTTAGTAGGGTTATTAATGGGAGCTGTTTTGTCCTCCAAAATACTGCTGCAAGCCTTGAATGGAATGGAGATTGCGTAGCCTAACACCGAGACAACAGCACGCGCAGTATCCATAAACACTGAACCAACAGTGTTATTTGTTGTAGGATGGCAATCTTTGCTTGGACTGATATTGTATGAGTCTGTTGTTGGGGGAGTAGTATTAACCTCATTCGAGTATGACTGTTCTGGGGATATTTCTGAATCCCTTTTAGGTTTTTCATCCACTTGTTCTGGCTCTTCATGGTTTTGTTCACTGTCAGCAGGAATCAGTCCCATATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTGTTCTAAAAGTGCTTGTTGTTTTCTTTGTTGCTTTTTTA ] [-] EMBL CD192043 [ TATTAATGGGAGCTGTTTTGTCCTCCAAAATACTGCTGCAAGCCTTGAATGGAATGGAGGTTGCGTAGCCTAACACCGAGACAACAGCACGCGCAGTATCCATAAACACTGAACTAACAGTGTTATTTGTTGTAGGATGGCAATCTTTGCTTGGACTGATATTGTATGAGTCTG ] [-] EMBL CD188488 [ agCCACTTGGTAGGGTTTGTCATGGTTTTGTTCACTGTCAGCAGGAATCAGTCCCATATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTGTTCTAAAAGTGCTTGTTGTTTTCTTTGTTGCTTTTTTAGACGGCGCTTGCGACTTTTTGTCATCTTCGTGTTATCTTGTTTTTCTTTGGGTGCAGTGCTCACTGCAGAACCTGACAGCTGTACACCTCGCCTTTGAGCATCGAGGGCCTCCGCTGCCATCCTACGAATTTGAGAATCAGAAATACAAACCAAAATGTTTTCCGGTTTGATATCTGTATGAATAATGTGA ] [-] EMBL CD186648 [ AATCAGAAATACAAACCAAAATGTTTTCCGGTTTGAAATCTGTATGAATAATGTGACACTTTGTGTGCAAGTAGTGAAGTCCTTGAAGGGTTTGTTTAATAATAGAACGAACATTTTCGAGCGGAATGCCTCGGTACTGAGACCTGATTATAAGCTTTAATAAATTATGGCCAAGAACCTCAAATATCATACAGACATGGTTCCCATTTACACCAGACACTCTGAAATCATCTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCACGGACGCATGACAGCAGCTTGATTTCATCAAGAGCTGTTTCTGTGTAGTGCGGAGCACTCTTGACTACTTTCATTGCAACGAAACGTTTTGAACATAAATCCCAGCATAACCACACAGTGGA] [-] EMBL CD166436 [ CCTTGAAGGGTTTGTTTAATAATAGAACGAACATTTTCGAGCGGAATGCCTCGGTACTGAGACCTGATTATAAGCTTTAATAAATTATGGCCAAGAACCTCAAATATCATACAGACATGGTTCCCATTTACACCAGACACTCTGAAATCATCTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCGCGGACGCATGACAGCAGCTTGATTTCATCAAGAGCTGTTTCTGTGTAGTTCGGAGCACTCTTGA ] consensusID : consensus_11083#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 678 fasta sequence [CGATGAGCAAGAAGACCCTCGGGACTACTGTATAGGTGGATACCATCCTGTTAAGATCGGGCAGGTATATAATTCGCGTTACCACGTCGTCCGTAAACTTGGTTGGGGGCACTTTTCCACTGTGTGGTTATGCTGGGATTTATGTTCAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATTGCTAAGATGATTTCAGAGTGTCTGGTGTAAATGGGAACCGTATCCTTTTATCCTATTGTTCATTTACTCGTACCCATCGAGTTTTCTAATTACGTCATTCTGGTATGTATTTTCACCATCTTTATCATCGTAGTGAGATTCCCTGGCCATGCACAGTCATACCCTTAGACGTCGAAACTGGGTCCACCCAGTAATTTTCGCTACAATCTGCCGGTGTATGGGATTCTATGCGTAAAATCACCATGGTACCAAACAGCAGGAATATCTTGGCAGCTCTTGAGAATATCTGGCTTGTTGCGTACTTTCTGCGACGTATATCTCTAATTTGCTTTGGCAAACTACTTGCCATTAAAATCTCCATAATTCATTTCGCCGGTTACATATACCTTACGCGCA] [+] EMBL CD186003 [CGATGAGCAAGAAGACCCTCGGGACTACTGTATAGGTGGATACCATCCTGTTAAGATCGGGCAGGTATATAATTCGCGTTACCACGTCGTCCGTAAACTTGGTTGGGGGCACTTTTCCACTGTGTGGTTATGCTGGGATTTATGTTCAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATT ] [+] EMBL CD069416 [ GATTTATGTTCAAAACGTATCGTTGCAATGAAAGTAGTCCAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATTGCTAAGATGATTTCAGAGTGTCTGGTGTAAATGGGAAC ] [+] EMBL CD071689 [ CAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGCTCCGCACTACACAGAAACAGCTCTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCG ] [+] EMBL CD123336 [ CTTGATGAAATCAAGCTGCTGTCATGCGTCCGCGAATCTGCCCCAGATGATCCATTCCGGAAGAAAACAGTTCAATTGCT AGATGATTTCAGAGTGTCTGGTGTAAATGGGAACCGTATCCTTTTATCCTATTGTTCATTTACTCGTACCCATCGAGTTTTCTAATTACGTCATTCTGGTATGTATTTTCACCATCTTTATCATCGTAGTGAGATTCCCTGGCCATGCACAGTCATACCCTTAGACGTCGAAACTGGGTCCACCCAGTAATTTTCGCTACAATCTGCCGGTGTATGGGATTCTATGCGTAAAATCACCATGGTACCAAACAGCAGGAATATCTTGGCAGCTCTTGAGAATATCTGGCTTGTTGCGTACTTTCTGCGACGTATATCTCTAATTTGCTTTGGCAAACTACTTGCCATTAAAATCTCCATAATTCATTTCGCCGGTTACATATACCTTACGCGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11083#0 CAGACTCATACAATATCAGTCCAAGCAAAGATTGCCATCCTACAACAAATAACACTGGAT 60 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 CACCCAACGCCTCTACAATGCCACAGTGTAAAAGTGACACAGAAGAGTCAAAAGATCATA 120 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 CTAAACATGAACAGAATAAGGGTCCAACTGACTTGTCAGAAGAAAGTGATCAATTTGTAC 180 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 AAAAGGACAATGAAAGTGGCAGTGGACTGGCTGTTCGTCGTCGAGTTAAAAAGCTTCCAG 240 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 ATCATTCTGGTGCTGCCGATGACAAGGCTGATATTCCACTGGCTTCTGTGACTGAACCAC 300 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 AGAAAACGTCAAATACTGGTGATCGTAGGTCCGTAATCATTCAACCAGATGGGCTTTTGG 360 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 CAGCAGCTGCAGCATCAGTGATGTCTAGTACTTCTCATTCTCCACCGGAATCCTCAGCAA 420 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 ACGATGGCCGAGCTCAGGTCAAATCGAATTTCACGAACTCAAGGTCAAATGGAACTGAAG 480 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 GAAATGAAAAGAAACTTAATTCTGAGTCTAAATCAACTCTGACAGCAAACAGTACTGGTG 540 consensus_11083#1 ------------------------------------GCCTAACCATGTAGGATTTCGCTC 24 consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 AAGGTAGCTCCAAACGGTTGAG--TTTGGTTGCACCATCTAATAACAATTCAGCTTCTGG 598 consensus_11083#1 ---GTCGTTTTGAATGGACGACATCTTAGTAGGGTTAT-TAATGGGAGCTGTTTTGTCCT 80 consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 TCAAAGTGCTTCAAACAAACGTCGGTCACTGCTTTTCGAGACTGTGATACATGAACCTGA 658 consensus_11083#1 CCAAAATACTGCTG-CAAGCCTTGAATGGAA----TGGAGATTGCGTAGCCTAACACCGA 135 consensus_11083#2 --------------------------------------CGATGAGCAAGAAGACCCTCGG 22 ** * consensus_11083#0 TGCTAGTAAAGAGCCATGTGATATTGAAGTGAAAATCGCCGAT-TTGGGTAATGCATGCT 717 consensus_11083#1 GAC-AACAGCACGCGCAGTATCCATAAACACTGAACCAACAGTGTTATTTGTTGTAGGAT 194 consensus_11083#2 GACTACTGTATAGGTGGATACCATCCTGTTAAGATCGGGCAGG--TATATAATTCGCGTT 80 * * * * * * * * * * * consensus_11083#0 GGACTTATCGTCATTTT-ACTGAGGATATTCAGACTAGACAGTATCGAGCCCTGGAGGTT 776 consensus_11083#1 GG--CAATCTTTGCTTGGACTGATATTGTATGAGTCTGTTGTTGGGGG-----AGTAGTA 247 consensus_11083#2 AC-CACGTCGTC-CGTAAACTTGGTTGGGGGCACTTTTCCACTGTGTGGTTATGCTGGGA 138 ** * * *** * * consensus_11083#0 CTCATTGGCTCCGAATATGGACCACCCGCAGATATTTG-GAGTACGGCTTGTATGGCTTT 835 consensus_11083#1 TTAACCTCATTCGAGTATGACTGTTCTGGGGATATTTCTGAATCCCTTTTAGGTTTTTCA 307 consensus_11083#2 TTTATGTTCAAAACGTTTCGTTGCAATGAAAGTAGTCAAGAGTGC--TCCGCACTACACA 196 * * * * * ** * ** * * consensus_11083#0 TGAATTGGCTACGG-GTGATTATCTTTTCGAACCTCATTCTGGCGAAGATTATACACGAG 894 consensus_11083#1 TCCACTTGTTCTGG-CTCTTCATGGTTTTG---TTCACTGTCAGCAGGAATCAGTCCCAT 363 consensus_11083#2 GAAACAGCTCTTGATGAAATCAAGCTGCTG----TCA-TGCGTCCGCGAATCTGCCCCAG 251 * * * * * * *** * ** * * * consensus_11083#0 ATGAAGACCACCTAGCACATATCATTGAATTATTAGGCCCCATACCTAGAAATATTGCTC 954 consensus_11083#1 ATCCAACAAACGACGTTCATGCTCCTGTGATTCCAATTCCTCTAATTCATCAAGTTCCTG 423 consensus_11083#2 ATGATCCATTCCGGAAGAAAACAGTTCAATTGCTAAG----ATGATTT-CAGAGTGTCTG 306 ** * * * * * * * * ** consensus_11083#0 TTTCAGGAAAATACTCCCGTGAATATTTTGATAAACGAGCTTGTTTACGTCATATACATC 1014 consensus_11083#1 TTCTA--AAAGTGCTTGT-----TGTTTTC---------TTTGTTGCTTTTTTAGACGGC 467 consensus_11083#2 GTGTAA-ATGGGAACCGT----ATCCTTTTAT-------CCTATTGTTCATTTACTCGTA 354 * * * * *** * ** ** * consensus_11083#0 GCTTGAAACCTTGGAATTTATTTAATGTCCTCACTGAGAAATATGATTGGCCACCAAGTG 1074 consensus_11083#1 GCTTGCGACTTT------------TTGTCATCTTCGTGTTATCTTGTTTTTCTTTGGGTG 515 consensus_11083#2 CCCATCGAGTTT--------TCTAATTACGTCATTCTGGTATGTA--TTTTCACCATCTT 404 * * ** * * ** * ** * * * * consensus_11083#0 AAGCGGCTCTTTTCACCAGTTTTTTGGAACCAATGCTCGCTTATGATCCTAATAAAAGAG 1134 consensus_11083#1 CAGTG-CTCACTGCAG-AACCTGACAGCTGTACACCTCGCCTTTGAGCATCG----AGGG 569 consensus_11083#2 TATCATCGTAGTGAGATTCCCTGGCCATGCACAGTCATACCCTTAGACGTCGAAACTGGG 464 * * * * * * * * * * * consensus_11083#0 CTTCCGCG-TGGGATTGTTTACAACATTCCTGGATAACTGGTC--AACCGTATTCCCCAT 1191 consensus_11083#1 CCTCCGC--TGCCAT--CCTACGA-ATTTGAGAATCAGAAATACAAACCAAAATGTTTTC 624 consensus_11083#2 TCCACCCAGTAATTTTCGCTACAATCTGCCGGTGTATGGGATTCTATGCGTAAAATCACC 524 * * * * *** * * * * * * * * consensus_11083#0 CAGTTGAGGAAGGCCTACCAAATCATATCCCATTTGGAGTGAATATGCCAGATCCATTGA 1251 consensus_11083#1 CGGTTT--GATATCTGTATGAATAATGTGACACTTTGTGTGCAAGTAGTGAAGTCCTTGA 682 consensus_11083#2 ATGGTA--CCAAACAGCAGGAATATCTTGGCAGCTC--TTGAGAATATCTGGCTTGTTGC 580 * * * *** * ** * ** * *** consensus_11083#0 TGGGTGACGTCTTATCTAATC-CTAGTACATATTACCATCCACATATCAATCAACCAAAT 1310 consensus_11083#1 AGGGT------TTGTTTAATA-ATAGAACGAA----CATTTTCGAGCGGAATGCCTCGGT 731 consensus_11083#2 GTACT------TTCTGCGACGTATATCTCTAAT-----TTGCTTTGGCAAACTACTTGCC 629 * ** * * ** * * * * * consensus_11083#0 GTTGTAGACCCCGCAAACACTGCTGGCTTGTGTTACAGTCAACACCCACACTTAAACAAA 1370 consensus_11083#1 ACTG-AGACCTGATTATAA--GCTTTAATAAATTATGGCCAAGAACCTCA---------- 778 consensus_11083#2 ATTAAAATCTCCATAATTC---ATTTCGCCGGTTACATATACCTTACGCGCA-------- 678 * * * * * *** * * * consensus_11083#0 CAATATCCGACAGTTCATTGCGTTGCTCCACAATCTAGAAACAGTCGTTCTGTCAACTAC 1430 consensus_11083#1 -AATATCATACAG------ACATGGTTCC--CATTTACAC-CAGACACTCTGA-AATCAT 827 consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 ATACCACCTGAACTATCTTTCAGTGGAAATGTCAATCCATCTGAATATCACTTATCCTAT 1490 consensus_11083#1 CTAGCAATTGAACTGTTTTCTTCCGGAATGGATCATCTGGGGCAGATTCACGGA-CGCAT 886 consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 GGTTCCGAAATGGTTGTGGGTGGGGAGAATATGCCGAATCGTAGTATGTGTGTACCGGAT 1550 consensus_11083#1 GACAGCAGCTTGATTTCA--TCAAGAGCTGTTTCTGTGTAGTGCGGAGCAC-TCTTGACT 943 consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 TCTCACTTTCAACCATGGTCTTCAAAACTTATGGGCTCAAAACGACTAGATGTTGTTGGC 1610 consensus_11083#1 ACTTTCATTGCAACGAAACGTTTTGAACATA-AATCCCAGCATAACCACACAGTGGA--- 999 consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 AATGTGGATGGTACAATAAAATTGGATCCTGTTCATGTTGGGAATTTCATACACAGTCTA 1670 consensus_11083#1 ------------------------------------------------------------ consensus_11083#2 ------------------------------------------------------------ consensus_11083#0 CCAGATCTCAGTCC 1684 consensus_11083#1 -------------- consensus_11083#2 -------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||