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Schistosoma mansoni
cluster # 11091 cluster # 11091       Sequences # 32       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11091#0 length = 1353 sequences # 14  
consensus_11091#1 length = 469 sequences # 16  
consensus_11091#2 length = 324 sequences # 1  
consensus_11091#3 length = 239 sequences # 1  

consensusID : consensus_11091#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1353
fasta sequence
                              [AATGACTGCAGATGTTCTAAAAGCATTGCCTCCTGATGTACGCACTTTAAAACTAAGTGGGCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTATTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAAGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAGTCTAAAGTCAATTGA-TTTGGTTGCAATGAAAAAATTGGAGAACAAAGTTAATGTCAT-CCCTGTAATAGCAAAATCAGATACAATAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTGGTAGTGAAACT-AATAGTGT-ATGAATCAACACATCCCATTCGCTGTTGTGGGTAGCTCAGAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTACAAACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGGAACAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTGTTAGTGAAACTAATAGTGNTATGAAATCACACATCCCATTCGCTGTTGTGGGTAGCTCAGAAGAGTTAAAATCATGGAAAACA]

[-] EMBL CD183567             [AATGACTGCAGATGTTCTAAAAGCAAAGCCTCCTGATGTACGCACTTTAAAACTAAGTGGGCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATTCGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD128405             [    ACTGCAGATGTTCTAAAAGCATTGCCTCCTGATGTACGCACTTTAAAACTAAGTGGGCATGTTGGCTTCGACAGTTTGCCAGATCAGTTAGTCAACAAGGCTATCAGCCAAGGATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCAC TTACTGGAGACTCTTTTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI976805             [          GATGTTCTAAAAGCATTGCCTCCTGATGTACGCACTTTAAAACTAAGTGGGCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTATTTAACCAGAAGTTTGATTTCAGTCCATCAAATCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAAGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAGTCTAAAGTCAATTGA TTg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BF936427             [                      GCATTGCCTCCTGATGTACGCACTTTAAAACTAAGTGGGCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTATTTAACCAGAAGTTTGATTTCAGTCCATCAAATCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAAGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAGTCTAAAGTCAATTGATTTTGGTTGCAATGAAAAAATTGGAGAACAAAGTTAATGTCAT CCCTGGTATAGCAAAATCAGATACAATAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAACTtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BF936953             [                                                        GTGGGCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTATTTAACCAGAAGTTTGATTTCAGTCCATCAAATCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAAGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAGTCTAAAGTCAATTGA TTTGGTTGCAATGAAAAAATTGGAGAACAAAGTTAATGTCAT CCCTGTAATAGCAAAATCAGATACAATAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTGGTAGTGAAACTAAATAGTGT ATGAATCAACACATt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD191803             [                                                         TGGGCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTTTTTAACCAGAAGTTTGTTTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGCTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAAGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAGTTTAAAGTCAATTGA TTTGGTTGCAATGAAAAAATTGGAGAACANAGTTAATGTCATCCCCTGTAATAGC AAATCAGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD168479             [                                                                                                                                                       GGAATTGGAAAGTCCACTTTACTGGAGACTCTATTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAATCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD168480             [                                                                                                                                                                                                                       CTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAATCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAAGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAGTCTAAAGTCAATTGA TTTGGTTGCAATGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD187093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAGTCAATTGA TTTGGTTGCAATGAAAAAATTGGAGAACAAAGTTAATGTCAT CCCTGTAATAGCAAAATAAGATACAATAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATACGGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTGTTAGTGAAACT AATAGTGTAATGAATCAACACATCCCATTCGCTGTTGTGGGTAGCTCAGAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD145643             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTATTTACCAGTTTCCTACTGATGATGAAGCTGTTAGTGAAACT AATAGTGTAATGAATCAACACATCCCATTCGCTGTTGTGGGTAGCTCAGAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCCCTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTTGTGATAATGAGAAAATGTCTCTTCAGGAAACCTATGTAAAGCGTCGTGAGCTTCAAAGGAA                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD153218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTACAAACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGGAACAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTGTTAGTGAAACTAATAGTGNTATGAAATCACACATCCCATTCGCTGTTGTGGGTAGCTCAGAAGAGTTAAAATCATGGAAAACA]
[+] EMBL CD131264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTACAAACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGGAACAAGCAAGAcaaggaaa                                                                                                                                           ]
[+] EMBL CD130640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTCCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTACAAACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAGAGAAGAAA                                                                                                                                                                                                                  ]
[+] EMBL CD193254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTACAAACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGC                                                                                                                                                                    ]


>consensus_11091#0 AATGACTGCAGATGTTCTAAAAGCATTGCCTCCTGATGTACGCACTTTAAAACTAAGTGG GCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATT CGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGAC TCTATTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTT AAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGA GACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTA TATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCA AGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAG TCTAAAGTCAATTGATTTGGTTGCAATGAAAAAATTGGAGAACAAAGTTAATGTCATCCC TGTAATAGCAAAATCAGATACAATAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAAT CCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGC TGGTAGTGAAACTAATAGTGTATGAATCAACACATCCCATTCGCTGTTGTGGGTAGCTCA GAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTT CAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTG AATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAA CGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAA AAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATG TTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTACAA ACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAGAGAAG AAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGGAACAA GCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGAT GATGAAGCTGTTAGTGAAACTAATAGTGNTATGAAATCACACATCCCATTCGCTGTTGTG GGTAGCTCAGAAGAGTTAAAATCATGGAAAACA



consensusID : consensus_11091#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 469
fasta sequence
                              [GCCGAGTTAACAGAAGAAGTTAAAA-TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTANCAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTC]

[+] EMBL CD087366             [GCCGAGTTAATTCGATTATTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATTCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAgcgaaggt                                                                                                                                                                              ]
[+] EMBL CD153483             [          CAGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGCTANCAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTC]
[+] EMBL CD145607             [          CAGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGGGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAG                                                                                                                                                                                                     ]
[+] EMBL CD153046             [          CAGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAG                                                                                                                                                                                                     ]
[+] EMBL CD202276             [          CAGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAG                                                                                                                                                                                                     ]
[-] EMBL CD145678             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTGCACTACGAAACTTATCGACGTCTACGCTTAATCTAAATGGGATTTCGTGATGATGAGAAAATGTCTCTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCTAAGGA                                                                                                                                                                                                   ]
[-] EMBL CD145396             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGG                                                                                                                                                                                                    ]
[-] EMBL CD145402             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGG                                                                                                                                                                                                    ]
[-] EMBL CD145444             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGG                                                                                                                                                                                                    ]
[-] EMBL CD145455             [           AGAAGAAGTTAAAA TCAATGGAAAATCAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAAATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTT                                                                                                                           ]
[-] EMBL CD145660             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCCAGTAGAAAATGAAAATCCCTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGCGTGCACTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCTCTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCTAAGGAA                                                                                                                                                                                                  ]
[-] EMBL CD202477             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCGGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGG                                                                                                                                                                                                    ]
[-] EMBL CD202494             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGCGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGG                                                                                                                                                                                                    ]
[-] EMBL CD202533             [           AGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACATATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAGG                                                                                                                                                                                                    ]
[+] EMBL CD153180             [          cgGAAGAAGTTAAAA TCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACTTATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAGGAAACCTATGAAAAGCGTCGTGAGCTTCAAAG                                                                                                                                                                                                     ]
[+] EMBL CD087364             [                   TTAAAAGTC ATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTGAATATGGAAGATTTACGTGAACGTAC                                                                                                                                                                                                                                                                                                                       ]


>consensus_11091#1 GCCGAGTTAACAGAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCA TGGGGTTCAGTTCAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATG CTATTACGTGTGAATATGGAAGATTTACGTGAACGTACACATGGTGTACATTACGAAACT TATCGACGTCAACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACTTCAG GAAACCTATGAAAAGCGTCGTGAGCTTCAAAGGAAAGAATTACAACAAAAGGAAGAAGAA ATGAGACAAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAG CGTGAGCTANCAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAATCCTCAGTGAAATA CAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGCTC



consensusID : consensus_11091#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 324
fasta sequence
                              [GATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTTTTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAGGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAACTTGGCCTGCCATAAGCTA]

[-] EMBL CD061163             [GATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGACTCTTTTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAGGCTTAAGTTAACGGTAGTAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAACTTGGCCTGCCATAAGCTA]


>consensus_11091#2 GATTCGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGG AGACTCTTTTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCA AGTTAAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAGGCTTAAGTTAACGGTAG TAGAGACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTG ATTATATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTA TGCAACTTGGCCTGCCATAAGCTA



consensusID : consensus_11091#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 239
fasta sequence
                              [GAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGGAACAAGCAAGACAAGGAAATCTGACTATGAAAAAAAGGAAATAAACTATTTGACGAGAGTACAGCTAGTCTTCACATTACTTAATAATTCACTTTAGCACTATGATTTCCGTTTATTGCTTTTGTTAATCTCACTTCTCTTTTATAGATTAGTTCAATTTTTTTCCTG]

[+] EMBL CD169829             [GAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGGAACAAGCAAGACAAGGAAATCTGACTATGAAAAAAAGGAAATAAACTATTTGACGAGAGTACAGCTAGTCTTCACATTACTTAATAATTCACTTTAGCACTATGATTTCCGTTTATTGCTTTTGTTAATCTCACTTCTCTTTTATAGATTAGTTCAATTTTTTTCCTG]


>consensus_11091#3 GAAACTTGAAGAGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAA GCAGCTTGCGGAACAAGCAAGACAAGGAAATCTGACTATGAAAAAAAGGAAATAAACTAT TTGACGAGAGTACAGCTAGTCTTCACATTACTTAATAATTCACTTTAGCACTATGATTTC CGTTTATTGCTTTTGTTAATCTCACTTCTCTTTTATAGATTAGTTCAATTTTTTTCCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11091#0      AATGACTGCAGATGTTCTAAAAGCATTGCCTCCTGATGTACGCACTTTAAAACTAAGTGG 60
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      GCATGTTGGCTTCGACAGTTTGCCAGATCAATTAGTCAACAAGGCTATCAGCCAAGGATT 120
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      CGTGTTTAATATACTATGTGTCGGTGAGACTGGAATTGGAAAGTCCACTTTACTGGAGAC 180
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      TCTATTTAACCAGAAGTTTGATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTT 240
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      AAAAGCTGTGACATATGATCTCAAAGAAGCTAATGTTAAGCTTAAGTTAACGGTAGTAGA 300
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      GACTTGTGGGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTA 360
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      TATCGATAACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCA 420
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      AGCATTTCATGACACCAGGGTTCATGTCTGTCTTTATTTTATCGCACCTACTGGACACAG 480
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      TCTAAAGTCAATTGATTTGGTTGCAATGAAAAAATTGGAGAACAAAGTTAATGTCATCCC 540
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      TGTAATAGCAAAATCAGATACAATAACCAAATCTGAATTACAAAAGTTTAAAGCAAGAAT 600
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      CCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTACTGATGATGAAGC 660
consensus_11091#1      ------------------------------------------------------------
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      TGGTAGTGAAACTAATAGTGTATGAATCAACACATCCCATTCGCTGTTGTGGGTAGCTCA 720
consensus_11091#1      ------------------------------------------------GCCGAGTTAACA 12
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      GAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTT 780
consensus_11091#1      GAAGAAGTTAAAATCAATGGAAAAACAGTACGTGTTCGACAGTATCCATGGGGTTCAGTT 72
consensus_11091#2      --------------------------GATTCGTGTTTAATA-TA-CTATGTG--TCGGTG 30
consensus_11091#3      -----------------------------------------------------------G 1
                                                                                   

consensus_11091#0      CAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTG 840
consensus_11091#1      CAAGTAGAAAATGAAAATCACTGTGACTTTGTCAGACTTCGAGAGATGCTATTACGTGTG 132
consensus_11091#2      AGACTGGAATTGGAAAGTCC-----ACTTTACTGGA-------GACTCTTTTTAACCAGA 78
consensus_11091#3      AAACTTGAAGAGAAGAAACGCT----TTTTGGAAGAGGA-AATAGCCGCTTTCGAACGTC 56
                         * * ***    * *  *        ***    **             * *        

consensus_11091#0      AATATGGAAGATTTACGTGAACGTACACATGGTGT-ACATTACGAAACTTATCGACGTCA 899
consensus_11091#1      AATATGGAAGATTTACGTGAACGTACACATGGTGT-ACATTACGAAACTTATCGACGTCA 191
consensus_11091#2      AGTTTG----ATTTCAGTCCATCAACTCATGATCTTACAGATCCCAAGTTAAAAGCTGTG 134
consensus_11091#3      GGAA-GCAGCTTGCGGAACAAGCAAGACAAGGAAATCTGACTATGAAAAAAAGGAAATAA 115
                            *     *        *   *  ** *              **   *         

consensus_11091#0      ACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACT-TCAGGAAACCTATG 958
consensus_11091#1      ACGCTTAATCGAAATGGGATTTCGTGATGATGAGAAAATGTCACT-TCAGGAAACCTATG 250
consensus_11091#2      ACATATGATCTCAA-AGAAGCTAATGTTAGGCTTAAGTTAACGGT-AGTAGAGACTTGTG 192
consensus_11091#3      ACTATTTGACGAGAGTACAGCTAGTCTTCACATTACTTAATAATTCACTTTAGCACTATG 175
                       **   *   *   *    *  *  *  *      *         *      *    * **

consensus_11091#0      AAAAGCGTCGTGAGCTTCA-AAGGAAAGAATTACAACAAAAG--GAAGAAGAAATGAGAC 1015
consensus_11091#1      AAAAGCGTCGTGAGCTTCA-AAGGAAAGAATTACAACAAAAG--GAAGAAGAAATGAGAC 307
consensus_11091#2      GGTACGGTGATCAGATTAATAAGGAAAATAATATAAAACCTGTTGTTGATTATATCGATA 252
consensus_11091#3      ATTTCCGTTTATTGCTTTT----GTTAATCTCACTTCTCTTTT-ATAGATTAGTTCAATT 230
                             **     * **      *  *     *              **  *  *     

consensus_11091#0      AAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGC 1075
consensus_11091#1      AAATGTTTGTTCAGCGTGTTAAAGAAAAAGAACAAGTTTTAAAAGAAGCAGAGCGTGAGC 367
consensus_11091#2      ACCAGTTTGAAAACTATCTACAAGAAGAACTGAAAATGAAAAGGTCTATGCAACTTGGCC 312
consensus_11091#3      TTTTTCCTG--------------------------------------------------- 239
                              **                                                   

consensus_11091#0      TACAAACCAAATTTGAAAGTCTAAAGAAAACGCACGCCGAGGAAAAGAAGAAACTTGAAG 1135
consensus_11091#1      TANCAACCAAATCTGAA------------------------------------------- 384
consensus_11091#2      TGCCAT---AAGCTA--------------------------------------------- 324
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      AGAAGAAACGCTTTTTGGAAGAGGAAATAGCCGCTTTCGAACGTCGGAAGCAGCTTGCGG 1195
consensus_11091#1      ----------------------------------TTACAAA----------AGTTTA--- 397
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      AACAAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTA 1255
consensus_11091#1      ---AAGCAAGAATCCTCAGTGAAATACAGTCTAATGAAATCGGTATTTACCAGTTTCCTA 454
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      CTGATGATGAAGCTGTTAGTGAAACTAATAGTGNTATGAAATCACACATCCCATTCGCTG 1315
consensus_11091#1      CTGATGATGAAGCTC--------------------------------------------- 469
consensus_11091#2      ------------------------------------------------------------
consensus_11091#3      ------------------------------------------------------------
                                                                                   

consensus_11091#0      TTGTGGGTAGCTCAGAAGAGTTAAAATCATGGAAAACA 1353
consensus_11091#1      --------------------------------------
consensus_11091#2      --------------------------------------
consensus_11091#3      --------------------------------------
                                                             




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)