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Schistosoma mansoni
cluster # 11112 cluster # 11112       Sequences # 34       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11112#0 length = 1713 sequences # 28  
consensus_11112#1 length = 761 sequences # 2  
consensus_11112#2 length = 485 sequences # 1  
consensus_11112#3 length = 379 sequences # 2  
consensus_11112#4 length = 247 sequences # 1  

consensusID : consensus_11112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 28
consensus length = 1713
fasta sequence
                              [ATTCGTCGAGATTATCACGCGTTCGTAACCATGACCCAGGGTTTTGTTAGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC-GATTT-TGAAACAAATGAGGCTTCTT-CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG-ATGGTA-CCACTTCCGTAGTCGTTCTAGCAGGAAGT-CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC-AAAGTCGTCTCACAAC-ACTCGGATTGCTTAGCACCCA-TAGCCGTAAAATC-TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTTAAAAAGGCTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGACACTGCATTGCATACCAATAGCAAGTCTAGACCATTTCAATCCAGAATATATGGGATCTGCAAGTTTAGTTGAAGAATCGGAGGCAACCGCTCATTGTGTTCACATCACAGGTATTGAGAACAGGGGAAGGACAATGTCAATTTTGGTCCGGGGTTCCAATAAACTTATGTTGGACGAAGCTGAACGTTCATTGCATGATGCCCTTTGTGTTATTCGGTGTTTAGTAAAAAAGAGAGCTATGATCTCAGGTGGTGGTGCACCAGAAATCGAAATTGCCCAAAAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTTCCGTGCTTTTGCTGATGCATTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGGTTCGAGTCCTGTACAAACTGTCACTGAACTACGAGCTTTACATGCTAAAGGAGAGAAAAATGCTGGCATCAATGTTCGAACGGGCGCTGTCGAGATATTTTGGCACAAAACGTGATTCAACCTATGTTGGTCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGTAGTATCCTCAAGATAGATGATGTGATCAATGCAATCAGGAACTAAGCAAGTTTGCATGGCTCCTATACTAAAAATGTGAAACTTGTTATTGCTTTCATGAAATATAACGTTT]

[+] EMBL CD112955             [ATTCGTCGAGATTATCACGCGTTCGTAACCATGACCCAAGGTTTTGTTAGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTGCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI975481             [  TCGTCGAGATTATCACGCGTTCGTAACCATGACCCAGGGTTTTGTTAGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AI975260             [      CGAGATTATCACGCGTTCGTAACCATGACCCAGGGTTTTGTTAGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC  AAGTCGTCTCACAAC ACTCGGATTG TTAGCACCCA TAGCCGTAAAATCTTGTCTTGA TGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD162927             [       GAGATTATCACGCGTTCGTAACCATGACCCAAGGTTTTGTTAGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT T AAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTGCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD156479             [                                      GGGTTTTGTTAGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAGGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAGCCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTANAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD097595             [                                                AGTAATGTTCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCTATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT CGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT TTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI977412             [                                                        TCCTAGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD150258             [                                                                          TAAAGCCGAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD179010             [                                                                                                                     GCCATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTGCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD118738             [                                                                                                                                   CAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD118822             [                                                                                                                                   CAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGGTATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD118804             [                                                                                                                                   CAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTTGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD118743             [                                                                                                                                   CAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTTGCCTGGGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD153629             [                                                                                                                                                                     ATCCGTTCTAGCCTGGGACCCACAGGAGTGGATTGGATGATGCAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCACTGATTTCTGAAACAAATGACGCTTATTGCACCCTGCAGCCAAAATGTAGGCAAAATGATCAAAAGCTCAATACATCGAGGCAGGTG ATGGTG CCACTTCCGTAGTCGTTCTATCACGAAGTGATTCTGGATGCTTGCTCAAAACTTGTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTAGTGATATTCTGGAGGGCATGTCTATCCCTGTATATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCATAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD142425             [                                                                                                                                                                                                            ATACAAGAGGCGAAAGGTGATGTCACAATCACTAATGATGGAGCCAC GATTT TGAAACAAGTGAGGCTTCTT CACCCTGCAGCCAAAATGATGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGATCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAATAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD190473             [                                                                                                                                                                                                                                                              TTT TGAAACAAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTGCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD072721             [                                                                                                                                                                                                                                                                        AAATGAGGCTTCTT CACCCTGCAGCCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTGCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD148634             [                                                                                                                                                                                                                                                                                                 CCAAAATGTTGGTAGAATTATCAAAAGCTCAAGACATCGAGGCAGGTG ATGGTA CCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGACGCTTGCTCAAAACTGCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BF936886             [                                                                                                                                                                                                                                                                                                               GAATTATCAAAAGCTCAAGACATCGAGGCAGGTGAATGGTACCCACTTCCGTAGTCGTTCTAGCAGGAAGT CTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCCAAAAGTCGTCTCACAACAACTCGGATTGCTTAGCACCCATTAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD161174             [                                                                                                                                                                                                                                                                                                                                                                                                                                  CAACATCCATTTCAGATGCTTTCCAAAAAGCCGCACTGAAGGCTTGTGATATTTTGGAGGGCATGTCTATCCCGGTAGATGTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATCGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCATAACTCCGTCTCCTTAGATGATACTTGTGTCGTGAAGAAAGTTGGAGGCACAGTGGAAGACACCAAGTTAGTAGTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD146659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCC AAAGTCGTCTCACAAC ACTCGGATTGCTTAGCACCCA TAGCCGTAAAATC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTTAAAAAGGCTGNGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTNAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD169880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TC TGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD112919             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTTAAAAAGGCTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGACACTGCATTGCATACCAATAGCAAGTCTAGACCATTTCAATCCAGAATATATGGGATCTGCANGTTTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD148913             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTTAAAAAGGCTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTCTCCATTACCTTAATAAAATGAAGATTATGGTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD096866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTTAAAAAGGCTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGACACTGCATTGCATACCAATAGCAAGTCTAGACCATTTCAATCCAGAATATATGGGATCTGCAAGTTTAGTTGAAGAATCGGAGGCAACCGCTCATTGTGTTCACATCACAGGTATTGAGAACAGGGGAAGGACAATGTCAATTTTGGTCCGGGGTTCCAATAAACTTATGTTGGACGAAGCTGAACGTTCATTGCATGATGCCCTTTGTGTTATTCGGTGTTTAGTAAAAAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD194135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAGCGAACAGAAGTAGAATTTATATGCAAGACACTGCATTGCATACCAATAGCAAGTCTAGACCATTTCAATCCAGAATATATGGGATCTGCAAGTTTAGTTGAAGAATCGGAGGCAACCGCTCATTGTGTTCACATCACAGGTATTGAGAACAGGGGAAGGACAATGTCAATTTTGGTCCGGGGTTCCAATAAACTTATGTTGGACGAAGCTGAACGTTCATTGCATGATGCCCTTTGTGTTATTCGGTGTTTAGTAAAAAAGAGAGCTATGATCTCAGGTGGTGGTGCACCAGAAATCGAAATTGCCCAAAAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTTCCGTGCTTTTGC                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD158613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGCGAACAGAAGTAGTATTTATATGCAAGACACTGCATTGCATACCAATAGCAAGTCTAGACCATTTCAATCCAGAATATATGGGATCTGCAAGTTTAGTTGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI975418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATCTCAGGTGGTGGTGCACCAGAAATCGAAATTGCCCAAAAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTTCCGTGCTTTTGCTGATGCATTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGGTTCGAGTCCTGTACAAACTGTCACTGAACTACGAGCTTTACATGCTAAAGGAGAGAAAAATGCTGGCATCAATGTTCGAACGGGCGCTGTCGAGATATTTTGGCACAAAACGTGATTCAACCTATGTTGGTCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGTAGTATCCTCAAGATAGATGATGTGATCAATGCAATCAGGAACTAAGCAAGTTTGCATGGCTCCTATACTAAAAATGTGAAACTTGTTATTGCTTTCATGAAATATAACGTTT]


>consensus_11112#0 ATTCGTCGAGATTATCACGCGTTCGTAACCATGACCCAGGGTTTTGTTAGTAATGTTCCT AGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCC ATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTG GGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAAT GATGGAGCCACGATTTTGAAACAAATGAGGCTTCTTCACCCTGCAGCCAAAATGTTGGTA GAATTATCAAAAGCTCAAGACATCGAGGCAGGTGATGGTACCACTTCCGTAGTCGTTCTA GCAGGAAGTCTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCC ATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCT ATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAAT TCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTG AGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAG AAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGT GCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTT TGTATTTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAG ATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTTAAA AAGGCTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAA TTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACA GAAGTAGAATTTATATGCAAGACACTGCATTGCATACCAATAGCAAGTCTAGACCATTTC AATCCAGAATATATGGGATCTGCAAGTTTAGTTGAAGAATCGGAGGCAACCGCTCATTGT GTTCACATCACAGGTATTGAGAACAGGGGAAGGACAATGTCAATTTTGGTCCGGGGTTCC AATAAACTTATGTTGGACGAAGCTGAACGTTCATTGCATGATGCCCTTTGTGTTATTCGG TGTTTAGTAAAAAAGAGAGCTATGATCTCAGGTGGTGGTGCACCAGAAATCGAAATTGCC CAAAAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTTCCGTGCT TTTGCTGATGCATTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGGTTCGAGTCCT GTACAAACTGTCACTGAACTACGAGCTTTACATGCTAAAGGAGAGAAAAATGCTGGCATC AATGTTCGAACGGGCGCTGTCGAGATATTTTGGCACAAAACGTGATTCAACCTATGTTGG TCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGTAGTATCCTCAAGATAGATG ATGTGATCAATGCAATCAGGAACTAAGCAAGTTTGCATGGCTCCTATACTAAAAATGTGA AACTTGTTATTGCTTTCATGAAATATAACGTTT



consensusID : consensus_11112#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 761
fasta sequence
                              [GATGGTACCACTTCCGTAGTCGTTCTAGCAGGAAGTCTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGGTGAGCTGGTTCTGTTTTGAATTAGGAAAATGATGGTTCATTGGTTCTTTATTGCTCCTTTAAGTTATATGCAAAGAAGTTGATCAGTTTACTCGGGTTTAGAATCCAGATAATTTCTTTTAACTTGCTTTCCTCTAATCATTCCATTTATAACCAAGTTAGCTAACAATCTGAGGTTTTCAAATAGAAAATTACTCAATTCCCAGTAAATTATTTTAAGGTGTATTTGTCTAAGCTGTATGTAGATCGATAAAATTCAACAGTCCACAATGGTCATTAACGTTTGTAAAAGCATCTCGAGAAGAATTTTTGTGCAACATTTTTTCATGCTTTTCTGATAGACACTGCATTGCATACCAA]

[+] EMBL CD136433             [GATGGTACCACTTCCGTAGTCGTTCTAGCAGGAAGTCTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD090296             [                                                                                                                                                                                                                                                                                           GATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGTATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGGTGAGCTGGTTCTGTTTTGAATTAGGAAAATGATGGTTCATTGGTTCTTTATTGCTCCTTTAAGTTATATGCAAAGAAGTTGATCAGTTTACTCGGGTTTAGAATCCAGATAATTTCTTTTAACTTGCTTTCCTCTAATCATTCCATTTATAACCAAGTTAGCTAACAATCTGAGGTTTTCAAATAGAAAATTACTCAATTCCCAGTAAATTATTTTAAGGTGTATTTGTCTAAGCTGTATGTAGATCGATAAAATTCAACAGTCCACAATGGTCATTAACGTTTGTAAAAGCATCTCGAGAAGAATTTTTGTGCAACATTTTTTCATGCTTTTCTGATAGACACTGCATTGCATACCAA]


>consensus_11112#1 GATGGTACCACTTCCGTAGTCGTTCTAGCAGGAAGTCTTCTCGATGCTTGCTCAAAACTT CTAGATAAAGGTATCCACCCAACCTCCATCTCAGATGCTTTCCAAAAAGCTGCACTGAAG GCTTGTGATATTCTGGAGGGCATGTCTATCCCTGTAGATCTAGGAAACAACGAAGAACTT ATCAAGGTGGCTACAACCTCACTTAATTCCAAAGTCGTCTCACAACACTCGGATTGCTTA GCACCCATAGCCGTAAAATCTGTCTTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTT TGCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTG TCAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGGTGAGCTGGTTCTGTTTTG AATTAGGAAAATGATGGTTCATTGGTTCTTTATTGCTCCTTTAAGTTATATGCAAAGAAG TTGATCAGTTTACTCGGGTTTAGAATCCAGATAATTTCTTTTAACTTGCTTTCCTCTAAT CATTCCATTTATAACCAAGTTAGCTAACAATCTGAGGTTTTCAAATAGAAAATTACTCAA TTCCCAGTAAATTATTTTAAGGTGTATTTGTCTAAGCTGTATGTAGATCGATAAAATTCA ACAGTCCACAATGGTCATTAACGTTTGTAAAAGCATCTCGAGAAGAATTTTTGTGCAACA TTTTTTCATGCTTTTCTGATAGACACTGCATTGCATACCAA



consensusID : consensus_11112#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence
                              [ACGTTATTTTCATGAAACAATAACAAGTTCCCATTTTTAGAATAGGAGCATGTCAAACCTNCTAGTACATGAAGCATGCCTCCAGCCCAAGAATTCAGCACGAGGCGTACAGTCTCNGTAGCTAAAGTAACAGCGCTGTAACTGANCACNATAGGTTGAATCACGTGGTGCACCAGAAATCGAAATTGCGCAACAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTCGCGTGCTTTTGCTGATGCGTTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGGTTTGAGTCCTGTACAAACTGTCACTGAGCTACGAGCTTTACATGCTAAAGGAGAGAAAAATGCTGGCATCAATGTTCGAACGGGCGCTGTCGTGGATATTTTGGCACAAAACGTGATTCAACCTATGTTGGTCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGCCTCGTGCCGAATT]

[-] EMBL CD077428             [ACGTTATTTTCATGAAACAATAACAAGTTCCCATTTTTAGAATAGGAGCATGTCAAACCTNCTAGTACATGAAGCATGCCTCCAGCCCAAGAATTCAGCACGAGGCGTACAGTCTCNGTAGCTAAAGTAACAGCGCTGTAACTGANCACNATAGGTTGAATCACGTGGTGCACCAGAAATCGAAATTGCGCAACAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTCGCGTGCTTTTGCTGATGCGTTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGGTTTGAGTCCTGTACAAACTGTCACTGAGCTACGAGCTTTACATGCTAAAGGAGAGAAAAATGCTGGCATCAATGTTCGAACGGGCGCTGTCGTGGATATTTTGGCACAAAACGTGATTCAACCTATGTTGGTCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGCCTCGTGCCGAATT]


>consensus_11112#2 ACGTTATTTTCATGAAACAATAACAAGTTCCCATTTTTAGAATAGGAGCATGTCAAACCT NCTAGTACATGAAGCATGCCTCCAGCCCAAGAATTCAGCACGAGGCGTACAGTCTCNGTA GCTAAAGTAACAGCGCTGTAACTGANCACNATAGGTTGAATCACGTGGTGCACCAGAAAT CGAAATTGCGCAACAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTG TTCGCGTGCTTTTGCTGATGCGTTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGG TTTGAGTCCTGTACAAACTGTCACTGAGCTACGAGCTTTACATGCTAAAGGAGAGAAAAA TGCTGGCATCAATGTTCGAACGGGCGCTGTCGTGGATATTTTGGCACAAAACGTGATTCA ACCTATGTTGGTCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGCCTCGTGCC GAATT



consensusID : consensus_11112#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 379
fasta sequence
                              [GAAGGCTTGTGATATTCTGGAGGGCATGTCAATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGCCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATGTAAGTTGTCTTAATATGCAAAAT]

[-] EMBL CD184782             [GAAGGCTTGTGATATTCTGGAGGGCATGTCAATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAATTCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGCCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATGTAAGTTGTCTTAATATGCAAAAT]
[+] EMBL CD157828             [                                                                                   CACTTAATCCCAAAGTCGTCTCATAACACTCGGATTGCTTATCACCCATAGCCGTAAAATCTGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATTTTCGTGTCGTGAAGAAACTTGGAGGCNCAGTCGAAGACACCAAG                                                                                                                                          ]


>consensus_11112#3 GAAGGCTTGTGATATTCTGGAGGGCATGTCAATCCCTGTAGATCTAGGAAACAACGAAGA ACTTATCAAGGTGGCTACAACCTCACTTAATTCCAAAGTCGTCTCACAACACTCGGATTG CTTAGCACCCATAGCCGTAAAATCTGTCTTGAGTGTTATAGACCCAGCCTATCCTAACTC CGTCTCCCTCGATGATATTCGTGTCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAA GTTAGTCGACGGCCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGT AGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACAGATGTAAG TTGTCTTAATATGCAAAAT



consensusID : consensus_11112#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 247
fasta sequence
                              [CTTTTGCACAGGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTAATTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTGCAAAA]

[+] EMBL CD114269             [CTTTTGCACAGGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTCAGTTTTGTAATTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATACGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTGTGCAAAA]


>consensus_11112#4 CTTTTGCACAGGGAGGCACAGTCGAAGACACCAAGTTAGTCGACGGTCTTATACTCAACC AACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAAAATAGCTCTTATTC AGTTTTGTAATTCTCCTCCAAAAACAGATATGGAAAATAATGTCGTCATTACAGATTATA CGCAGATGGATAGAATTATGAAAGAAGAAAGACAATATATTCTCAACATCATCAAAGCTG TGCAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11112#0      ATTCGTCGAGATTATCACGCGTTCGTAACCATGACCCAGGGTTTTGTTAGTAATGTTCCT 60
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AGTGGATCTAACGCTAAAGCCAAGGAAGGTCAGTATGAGGATAAAGGGAAACCTGCTGCC 120
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      ATCAGGTCAAGCAACATAGTTGCTGCAAAAGCTGTCGCCGACGCAATTCGTACTAGCCTG 180
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GGACCCAAAGGAATGGATAAGATGATACAAGAGGCGAAAGGTGATGTCACAATCACTAAT 240
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GATGGAGCCACGATTTTGAAACAAATGAGGCTTCTTCACCCTGCAGCCAAAATGTTGGTA 300
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GAATTATCAAAAGCTCAAGACATCGAGGCAGGTGATGGTACCACTTCCGTAGTCGTTCTA 360
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ---------------------------------GATGGTACCACTTCCGTAGTCGTTCTA 27
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GCAGGAAGTCTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCC 420
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      GCAGGAAGTCTTCTCGATGCTTGCTCAAAACTTCTAGATAAAGGTATCCACCCAACCTCC 87
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      ATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCT 480
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      -----------------------------GAAGGCTTGTGATATTCTGGAGGGCATGTCA 31
consensus_11112#1      ATCTCAGATGCTTTCCAAAAAGCTGCACTGAAGGCTTGTGATATTCTGGAGGGCATGTCT 147
consensus_11112#2      -----------------------------------ACGTTATTTTCATGAAACAATAACA 25
                                                                                   

consensus_11112#0      ATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAAT 540
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAAT 91
consensus_11112#1      ATCCCTGTAGATCTAGGAAACAACGAAGAACTTATCAAGGTGGCTACAACCTCACTTAAT 207
consensus_11112#2      AGTTCCCATTTTTAGAATAGGAGCATGTCAAACCTNCTAGTACATGAAGCATGCCTCCAG 85
                                                                                   

consensus_11112#0      TCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTG 600
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      TCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTG 151
consensus_11112#1      TCCAAAGTCGTCTCACAACACTCGGATTGCTTAGCACCCATAGCCGTAAAATCTGTCTTG 267
consensus_11112#2      CCCAAGAATTCAGCACGAGGCGTACAGT-CTCNGTAGCTAAAGTAACAGCGCTGTAACTG 144
                                                                                   

consensus_11112#0      AGTGTTATA--------GACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTG 652
consensus_11112#4      -----------------------------------------------------------C 1
consensus_11112#3      AGTGTTATA--------GACCCAGCCTATCCTAACTCCGTCTCCCTCGATGATATTCGTG 203
consensus_11112#1      GGTGTAATGTTTTGTTGATTCAGAAAAGTATTTTGCGAGATGCTGTAAATGAATTAGCTC 327
consensus_11112#2      ANCACNATA-------GGTTGAATCACGTGGTGCACCAGAAATCGAAATTGCGCAACAGT 197
                                                                                   

consensus_11112#0      TCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGA-CGGTCTTATACTC 711
consensus_11112#4      TTTTGCACAG----GGAGGCACAGTCGAAGACACCAAGTTAGTCGA-CGGTCTTATACTC 56
consensus_11112#3      TCGTGAAGAAACTTGGAGGCACAGTCGAAGACACCAAGTTAGTCGA-CGGCCTTATACTC 262
consensus_11112#1      TCCATTACTTTAATAAAATGAAGATTATGGTTGTCAAGGATATCGAGCGAACAGAAGTAG 387
consensus_11112#2      TAGCTGCATTCGCTAACACTACACCTGGTCTTGATCAGTATTGTTCGCGTGCTTTTGCTG 257
                       *                   *               **         **  *        

consensus_11112#0      A-ACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAA----AATAG 766
consensus_11112#4      A-ACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAA----AATAG 111
consensus_11112#3      A-ACCAACGTGCTGAGTCTGCTTGTGGCGTTAAAAGAGTAGAGAAAGCGAA----AATAG 317
consensus_11112#1      A-ATTTATATGCAAGGTGAGCTGGTTCTGTTTTGAATTAGGAAAATGATGGTT-CATTGG 445
consensus_11112#2      ATGCGTTTGAAGTTATTCCGTATACATTAGCAGAAAATGCTGGTTTGAGTCCTGTACAAA 317
                       *               *  *              *           *        *    

consensus_11112#0      CTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACA--GATATGGAAAATAATGTCGTCAT 824
consensus_11112#4      CTCTTATTCAGTTTTGTAATTCTCCTCCAAAAACA--GATATGGAAAATAATGTCGTCAT 169
consensus_11112#3      CTCTTATTCAGTTTTGTATTTCTCCTCCAAAAACA--GATGT---AAGTTGTCTTAATAT 372
consensus_11112#1      TTCTTTATTGCTCCTTTAAGTTATATGCAAAGAAGTTGATCAGTTTACTCGGGTTTAGAA 505
consensus_11112#2      CTGTCACTGAGCTACGAGCTTTACATGCTAAAGGA--GAGAAAAATGCTGGCATCAATGT 375
                        * *   *            *    * * **      **         *    *      

consensus_11112#0      TACAGATTATACGCAGATGGATAGAATTATGAAAGAAG---AAAGACAATATATTCTCAA 881
consensus_11112#4      TACAGATTATACGCAGATGGATAGAATTATGAAAGAAG---AAAGACAATATATTCTCAA 226
consensus_11112#3      GCAAAAT----------------------------------------------------- 379
consensus_11112#1      TCCAGATAATTTCTTTTAACTTGCTTTCCTCTAATCATTCCATTTATAACCAAGTTAGCT 565
consensus_11112#2      TCGAACGGGCGCTGTCGTGGATATTTTGGCACAAAACGT---GATTCAACCTATGTTGGT 432
                          *                                                        

consensus_11112#0      CATCATCAAAGCTGTTAAAAAGGCTGGGTGTAATGTTTTGTTGATTCAGAAAAGTATTTT 941
consensus_11112#4      CATCATCAAAGCTGTGCAAAA--------------------------------------- 247
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      AACAATCTGAGGTTTTCAAATAGAAAATTACTCAATTCCCAGTAAATTATTTTAAGGTGT 625
consensus_11112#2      CAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGCCTCGTGCCGAATT------- 485
                                                                                   

consensus_11112#0      GCGAGATGCTGTAAATGAATTAGCTCTCCATTACTTTAATAAAATGAAGATTATGGTTGT 1001
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ATTTGTCTAAGCTGTATGTAGATCGATAAAATTCAACAGTCCACAATGGTCATTAACGTT 685
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      CAAGGATATCGAGCGAACAGAAGTAGAATTTATATGCAAGACACTGCATTGCATACCAAT 1061
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      TGTAAAAGCATCTCGAGAAGAATTTTTGTGCAACATTTTTTCATGCTTTTCTGATAGACA 745
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AGCAAGTCTAGACCATTTCAATCCAGAATATATGGGATCTGCAAGTTTAGTTGAAGAATC 1121
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      CTGCATTGCATACCAA-------------------------------------------- 761
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GGAGGCAACCGCTCATTGTGTTCACATCACAGGTATTGAGAACAGGGGAAGGACAATGTC 1181
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AATTTTGGTCCGGGGTTCCAATAAACTTATGTTGGACGAAGCTGAACGTTCATTGCATGA 1241
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      TGCCCTTTGTGTTATTCGGTGTTTAGTAAAAAAGAGAGCTATGATCTCAGGTGGTGGTGC 1301
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      ACCAGAAATCGAAATTGCCCAAAAGTTAGCTGCATTCGCTAACACTACACCTGGTCTTGA 1361
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      TCAGTATTGTTTCCGTGCTTTTGCTGATGCATTTGAAGTTATTCCGTATACATTAGCAGA 1421
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AAATGCTGGTTCGAGTCCTGTACAAACTGTCACTGAACTACGAGCTTTACATGCTAAAGG 1481
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AGAGAAAAATGCTGGCATCAATGTTCGAACGGGCGCTGTCGAGATATTTTGGCACAAAAC 1541
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GTGATTCAACCTATGTTGGTCAGTTACAGCGCTGTTACTTTAGCTACGGAGACTGTACGT 1601
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AGTATCCTCAAGATAGATGATGTGATCAATGCAATCAGGAACTAAGCAAGTTTGCATGGC 1661
consensus_11112#4      ------------------------------------------------------------
consensus_11112#3      ------------------------------------------------------------
consensus_11112#1      ------------------------------------------------------------
consensus_11112#2      ------------------------------------------------------------
                                                                                   

consensus_11112#0      TCCTATACTAAAAATGTGAAACTTGTTATTGCTTTCATGAAATATAACGTTT 1713
consensus_11112#4      ----------------------------------------------------
consensus_11112#3      ----------------------------------------------------
consensus_11112#1      ----------------------------------------------------
consensus_11112#2      ----------------------------------------------------
                                                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)