These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11115#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1480 fasta sequence [CGCAATGGCTGCTCTTGAAGTTGAATCGTACCCACGTCGGTCGCCAAAATATTTGTCTGGAGAACCCTCCAGGAAAGTCAAACGTGAAGCTGAAAAAGGGACTTTGGATCCTACTCCTCCTCCCACTGATGGGATAAAGAATTATTATATGAATAAGATCGATGAACATCAATTTATATACACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA-TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT-CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTCCCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAAAAAAAAAAAAAAAAAAAA] [+] EMBL AI976129 [CGCAATGGCTGCTCTTGAAGTTGAATCGTACCCACGTCGGTCGCCAAAATATTTGTCTGGAGAACCCTCCAGGAAAGTCAAACGTGAAGCTGAAAAAGGGACTTTGGATCCTACTCCTCCTCCCACTGATGGGATAAAGAATTATTATATGAATAAGATCGATGAACATCAATTTATATACACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTATGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTATATTAGCAGATCAAAGAAATTAAA ] [-] EMBL CD160013 [ AGAATTATTATATGAATAAGATCGATGAACATCAATTTATATACACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAA ] [+] EMBL BG930850 [ tTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAG ] [-] EMBL BG931249 [ TCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGAt ] [-] EMBL BG931448 [ GAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAATTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCTTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCTTAGGAATAGCACAACTTAAAGGCGTGTTATTATATGGAC ] [-] EMBL BG931220 [ GATATAAAGAAAGTCCTGGTCAAAGTACAACCCGAAGGGACATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGAg ] [+] EMBL AI975510 [ TGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCATAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCT ] [-] EMBL BG930177 [ TGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGATCCCC ] [-] EMBL BG931005 [ AAATACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATTAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTTAAGGCGTGTTATTATATGGAC ] [-] EMBL CD180405 [ CATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCA TAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCCTTTTGATGCCCTAGGAATAGCACAACCTAAGGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTC ] [-] EMBL BG930203 [ TAGTTACACGTTGCA TAAAATTTT CCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTT CCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGACCCCCCgt ] [+] EMBL CD128986 [ catgtatAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAGAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGAACGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTC AAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGC ] [+] EMBL CD180149 [ GAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTCCATAATTTTCATGGATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCATAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTCATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGAACTGGCCGAATTGATCGGAA ] [-] EMBL CD130746 [ GTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTC ] [+] EMBL CD128765 [ TCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAG ] [+] EMBL CD083915 [ gGGCACAGGGGGAGATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACT ] [-] EMBL CD115158 [ GATAGTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTGTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGGCATACTTGATTCAGCTCTTCTAAGACGTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCTGTGCAAAAG ] [+] EMBL CD135711 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATC ] [+] EMBL CD151886 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATC ] [+] EMBL CD135702 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGC ] [+] EMBL CD135677 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGC ] [+] EMBL CD135712 [ GTGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAGATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGC ] [-] EMBL CD113690 [ TGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCC ] [-] EMBL CD113629 [ TGAAGTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCC ] [-] EMBL CD061655 [ ACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGAAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAACTAca ] [-] EMBL CD061636 [ ACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGAAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGC AGAAGATTTTGAACTA CAG TGCTA ] [+] EMBL AA629491 [ ACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAATATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCTGGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATCCTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTNAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCANAAGTCNAANGAATGTGTTCGGAAGCCGGTATGTATGCGTTACGAGAACGTCNGGTTCATGTTACNCAAGAANA TTTGAATTAGCA ] [-] EMBL AI395530 [ ACTAGAGATATCGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTCCCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_11115#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 465 fasta sequence [AGCTGCATTACCGGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAACTAGGGTTTTGTTCTAATTATGTAAATTGTAGGTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT] [-] EMBL BF936521 [AGCTGCATTACCGGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATGTATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAACTAGGGTTTTGTTCTAATTATGTAAATTGTAGGTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT] [-] EMBL AA999634 [ ATTAGCAGTTGCTAAGGTGATGCAAAAATTTTCTGAGGAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTGTTTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTTTTCATTCTTTANTTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATGGCTCCCATAAACTGNTTT ] consensusID : consensus_11115#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 450 fasta sequence [GTATTGTTATGGATGGGGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCACATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGA] [+] EMBL BG930562 [GTATTGTTATGGATGGGGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCACATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGA] [+] EMBL BG930553 [ TATTGTGATGGATGGGGGCTCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGTGTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTACTTATGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGA] consensusID : consensus_11115#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 339 fasta sequence [CGCGGCCAGAATTCGGTCCGAGGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTNCATAATTTTCATGGATGAAGTTGATTCGAT] [+] EMBL CD077696 [CGCGGCCAGAATTCGGTCCGAGGAGATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTAAAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATGGACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTACATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAGCTAGGATGGTTCGTGAGTTGTTCGTTATGGCGCGAGAACATGCACCTTNCATAATTTTCATGGATGAAGTTGATTCGAT] consensusID : consensus_11115#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence [TCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGACCCCCCGTCTATCACA] [-] EMBL BG931154 [TCAACGGAACGAGTTAAACGCTAAAGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATATGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGCTCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGACCCCCCGTCTATCACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11115#0 CGCAATGGCTGCTCTTGAAGTTGAATCGTACCCACGTCGGTCGCCAAAATATTTGTCTGG 60 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 AGAACCCTCCAGGAAAGTCAAACGTGAAGCTGAAAAAGGGACTTTGGATCCTACTCCTCC 120 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 TCCCACTGATGGGATAAAGAATTATTATATGAATAAGATCGATGAACATCAATTTATATA 180 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 CACCGAAAAAGTCCTCAACTTAAGGCGACTGGAGGCTCAACGGAACGAGTTAAACGCTAA 240 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 AGTTCGGATGCTTCGAGAAGAGTTGCAGCTGTTACAGGAACAAGGTTCATTTGTTGGAGA 300 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 AGTTATAAAGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGGGAAATA 360 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 TGTTGTGGACATCGACAAAAACATTGAAATGTCTCAGATATCCCCTAATTGCCGTGTGGC 420 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 TCTCCGAAGCGATAGTTACACGTTGCATAAAATTTTGCCAAGCAAAGTTGATCCCCTTGT 480 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 GTCTTTAATGATGGTAGAAAAGGTTCCGGACTCTAC--TT-ATGAGATGATTGGAGGCCT 537 consensus_11115#3 -------------------CGCGGCCAGAATTCGGT--CCGAGGAGATGATTGGAGGCCT 39 consensus_11115#2 -GTATTGTTATGGATGGGGGCTCAACGGAACGAGTT--AAACGCTAAAGTTCGGATGCTT 57 consensus_11115#4 ---------------------TCAACGGAACGAGTT--AAACGCTAAAGTTCGGATGCTT 37 consensus_11115#1 ---------AGCTGCATTACCGGACCTGCGTAAGCTAGCAGAATCAATGCCTGGTGCCAG 51 * * * * ** * consensus_11115#0 AGATAAGCAGATCAAAGAAAT---TAAAGAAGTCAT-TGAGCTTCCTGTAAAACACCCAG 593 consensus_11115#3 AGATAAGCAGATCAAAGAAAT---TAAAGAAGTCAT-TGAGCTTCCTGTAAAACACCCAG 95 consensus_11115#2 CGAGAAG--AGTTGCAGCTGT---TACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAA 112 consensus_11115#4 CGAGAAG--AGTTGCAGCTGT---TACAGGAACAAGGTTCATTTGTTGGAGAAGTTATAA 92 consensus_11115#1 CGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGG-TATGTATGCGTTACGAGAACGTC 110 * * ** * ** * * * * * * consensus_11115#0 AGCTTTTTGAT---------GCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATG 644 consensus_11115#3 AGCTTTTTGAT---------GCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATATG 146 consensus_11115#2 AGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGG-GAAATATGTTGTG 171 consensus_11115#4 AGGCTATGGATAAAAAGAAAGTGCTGGTCAAAGTACAACCCGAAGG-GAAATATGTTGTG 151 consensus_11115#1 GGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCTAAGG-----TGATGCAAAA 165 * * * * * * * ** * * * * ** consensus_11115#0 GACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTA 704 consensus_11115#3 GACCCCCAGGTACAGGAAAAACCTTGTTAGCTCGTGCCGTTGCCCACCATACTGAATGTA 206 consensus_11115#2 GACATC-------GACAAAAACATTGAAATGTCTCACATATCCCC----TAATTGCCGTG 220 consensus_11115#4 GACATC-------GACAAAAACATTGAAATGTCTCAGATATCCCC----TAATTGCCGTG 200 consensus_11115#1 AGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGCTTTAAATTTACTTG 225 * * * * * * * * * consensus_11115#0 CATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAG-CTAGG 763 consensus_11115#3 CATTTATTCGTGTCAGTGGTTCTGAACTTGTTCAAAAATTCATCGGCGAAGGAG-CTAGG 265 consensus_11115#2 TGGCTCTCCGAAGCGATAGTTACACG-TTGCATAAAATTTTGCCA-------AG-CAAAG 271 consensus_11115#4 TGGCTCTCCGAAGCGATAGTTACACG-TTGCATAAAATTTTGCCA-------AG-CAAAG 251 consensus_11115#1 T-TTTATATAACTAAACAGTACCATTTTCTTTTGTAAAAACGTTACGGGTATATTCTGTT 284 * * ** * ** * * consensus_11115#0 ATGGTTCGTGAGTTGTTCGTT-ATGGC-GCGAGAACATGCACCTTCCA-TAATTTTCATG 820 consensus_11115#3 ATGGTTCGTGAGTTGTTCGTT-ATGGC-GCGAGAACATGCACCTTNCA-TAATTTTCATG 322 consensus_11115#2 TTGATCCCCTTGT-GTCTTTA-ATGAT-GGTAGAAAAGGTTCCGGACT-CTACTTATGAG 327 consensus_11115#4 TTGACCCCCC----GTCTATC-ACA----------------------------------- 271 consensus_11115#1 TTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCCAGTTATTTAGATC 344 * * * * consensus_11115#0 GATGAAGTTGATTCGATTGGATCCACCAGATTAGAAAGTGGCACAGGGGGAGATAGTGAA 880 consensus_11115#3 GATGAAGTTGATTCGAT------------------------------------------- 339 consensus_11115#2 ATGATTGGAGGCCTAGATAAGCAGATCAAAGAAATTAAAGAAGTCATTGAGCTTCCTGTA 387 consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 GCTCCCATAAACTGCTTTATTTTTAGTAACTAGGGTTTTGTTCTAATTATGTAAATTGTA 404 consensus_11115#0 GTTCAACGAACCATGTTGGAGCTGCTTAATCAGTTGGACGGGTTTGAACCCAAACAAAAT 940 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 AAACACCCAGAGCTTTTTGATGCCCTAGGAATAGCACAACCTAAAGGCGTGTTATTATAT 447 consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 GGTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCG 464 consensus_11115#0 ATAAAAGTTATCATGGCGACAAATCGTATTGACATACTTGATTCAGCTCTTCTAAGACCT 1000 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 GGA--------------------------------------------------------- 450 consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 T----------------------------------------------------------- 465 consensus_11115#0 GGCCGAATTGATCGGAAAATCGAATTTCCTGCTCCAAATGAGGAGGCTCGATTAGATATC 1060 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 CTGAAAATACATTCTCGAAAGATGAACTTGACTAGAGATATCGACCTGCGTAAGCTAGCA 1120 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 GAATCAATGCCTGGTGCCAGCGGTGCAGAAGTCAAAGGAGTGTGTACGGAAGCCGGTATG 1180 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 TATGCGTTACGAGAACGTCGGGTTCATGTTACGCAAGAAGATTTTGAATTAGCAGTTGCT 1240 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 AAGGTGATGCAAAAAGATTCTGAGAAAAATGTATCCATCAAAAAACTGTGGAAATAAGGC 1300 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 TTTAAATTTACTTGTTTTATATAACTAAACAGTCCCATTTTCTTTTGTAAAAACGTTACG 1360 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 GGTATATTCTGTTTTCATTCTTTATCTACCTGTTCACAGCTAAGTGAACACATTTTTTCC 1420 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ consensus_11115#0 AGTTATTTAGATCGCTCCCATAAACTGCTTTATTTTTAGTAAAAAAAAAAAAAAAAAAAA 1480 consensus_11115#3 ------------------------------------------------------------ consensus_11115#2 ------------------------------------------------------------ consensus_11115#4 ------------------------------------------------------------ consensus_11115#1 ------------------------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||