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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11118#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 1558 fasta sequence
[TTTAATTAAACCATCTATGAGTGCACTGAAGATTTGAGATATCCCTCTAAGTTGCGATTGGTTTATTTCATTAGAAACCCAAGATGGTTTAGCTTGAGGAAAAATTCTTGAAGAACTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATGGGATGGATTCATTGAGAATTGTATGGGTGACGATGAAACAAGTAGATTGAATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA-TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA-CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC-GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT-TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGTTGATGTTTTAGG-TTCCGAGTTACTACTCTGAGAAGTAGAGACGGTACTATTGACCTGTTGTGTCTCCCGTTCTGTCATAGTAATCACGTTGAAATCAGTTATCAAATGAAGCATATGGGCGTTCAAGTGTAGTAAACGGCTTACTTGGGAAAACAAACGTGGATGCCAGTTCGATACTTGAGTCGTTCTCCTCGTAGTTTCAATATTGTGTGATGTGTGACCAATTTCTTCTAATGTGGAAGAGTCCCAG]
[-] EMBL CD189012 [TTTAATTAAACCATCTATGAGTGCACTGAAGATTTGAGATATCCCTCTAAGTTGCGATTGGTTTATTTCATTAGAAACCCAAGATGGTTTAGCTTGAGGAAAAATTCTTGAAGAACTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATGGGATGGATTCATTGAGAATTGTATGGGTGACGATGAAACAAGTAGATTGAATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCCTGAACCGAAGGAAAATGATCCAGGA ]
[-] EMBL CD113062 [ TAGATTGAATGGTAAGGGTCCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTTCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCTTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACATGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACAATTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCATGGTTGGTTGTTTAAAATGCCAGGTTGTACAGTAGC TGCGATTGAGCCGAACGca ]
[-] EMBL CD122317 [ GATCGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTA ]
[-] EMBL CD122328 [ GATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTA ]
[-] EMBL CD128113 [ ATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTAAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTAGTTGGTAGTGAATCA ]
[+] EMBL CD068426 [ TTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTAGTCGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAA ]
[-] EMBL CD127730 [ GGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCnn ]
[+] EMBL CD186087 [ GGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTGGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAATAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAGAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGT ]
[+] EMBL CD115672 [ CTTGCGAACGACCCAAACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTANAAGCAGATCGACTTCNGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGCGGTGGTCCTTGTCGGT TTCAGTTGCCACAA ]
[-] EMBL CD196581 [ gtgctcaAATATTA GATCTGTGTTGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGG ]
[-] EMBL CD157198 [ GTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACGCAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAACAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTT ]
[+] EMBL BG930751 [ tCATAGTTACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTTCGTTTTGAGGTTACTAGCG ]
[+] EMBL CD115713 [ cctggcACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA CGCTATAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGNTGATGTTNTAGGTTTCGGAGTTACTACTCTGAGAAGTAGAGACGGTACTATTGACCTGTTGTGTCTCCCGTTCTGTCATAGTTAT ]
[+] EMBL CD115743 [ ggcACGTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGACTTCT TATATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAG TTCATCACTTGTTGATGTTTTAGG TTCCGAGTTACTACTCTGAGAAGTAGAGACGGTACTATTGACCTGGTGTGTCTCCCGTTCTGGCATAGTAA ]
[+] EMBL CD114494 [ gacagaggGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCATTTGTGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACGGCTGGAATATTTTCCGCTTGAAGGTTACTAGCGCGGTTTACATTATAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGGNCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTC TTTGCAGGATC CCCGTGAGGTCATTTAAAG ATTCGCATCAGTATCCTGTCTTTGAGA TCATTACTTGTCGATGTTTTt ]
[+] EMBL CD114610 [ TGGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGCTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGTCGATGTTNTA ]
[-] EMBL CD114162 [ GGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAGCATNTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCACGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGTTGATGTTTTAG ]
[+] EMBL CD114258 [ GGAAGTAGTTACAGTGCGAGTAGTAGATGGTATTGACACAACACTAGTAGGAACATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGGTAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAAGATCACGCGTGATGTCGATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGTTGATGTTTTA ]
[-] EMBL BG930706 [ GTAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATACCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGCAGTTGTGaa ]
[-] EMBL BG930715 [ TAGTAGATGGTATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATACCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGCAGTTGTG ]
[+] EMBL CD093650 [ CATTTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTG ]
[-] EMBL BG930688 [ TTGTTGCAGTTATTGGAGATGAAAGTGA TGCTAGAAATGGAGCAGCTGGGAGACTAAATGTGTTTCAGGATATTATTGGAATGTCAAACCGATGGATAATACCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGAATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGTATGCGTGAAGTTGTGaa ]
[-] EMBL BG931344 [ GAGCAGCTGGGAGACTATATGTCTTTCCGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTGATATTCGTAGTCATCGCAGGGTTAGAT TATCCGGATGAACTTGTAACAGCTGGAATATTTTCCGTTAGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCcc ]
[+] EMBL CD125306 [ acacGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTG ]
[+] EMBL CD158551 [ AATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTT ]
[-] EMBL CD120683 [ ATGTGTTTACGGATATTATTGGAATGTCAAACCGATGGATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGGTGTA CCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCC ]
[+] EMBL CD114614 [ AGAATGTTCGGATCTAATAATGC GTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCT TAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAAATTCATCACTTGTCGATGTTTTA ]
[-] EMBL BG932190 [ CGCACGTATCCGACGTCTATCAGTGTCCG AACGCTATAAAACCCGTTGAGAACATTGTTTGACTTGAGGACCTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGTTGATGTTTTAGG TTCCGAGTTACTACTCTGAGAAGTAGAGACGGTACTATTGACCTGTTGTGTCTCCCGTTCTGTCATAGTAATCACGTTGAAATCAGTTATCAAATGAAGCATATGGGCGTTCAAGTGTAGTAAACGGCTTACTTGGGAAAACAAACGTGGATGCCAGTTCGATACTTGAGTCGT ]
[-] EMBL CD149220 [ CATCAGTATCCTGTCTNTGAGATTCATCACTTGTTGATGTTTTAGG TTCCGAGTTACTACTCTGAGAAGTAGAGACGGTACTATTGACCTGTTGTGTCTCCCGTTCTGTCATAGTAATCACGTTGAAATCAGATATCAAATGAAGCATATGGGCGTTCAAGTGTAGTAAACGGCTTACTTGGGAAAACAAACGTGGATGCCAGTTCGATACTTGAGTTGTTCTCCTCGTAGTTTCAATATTGTGTGATGTGTGACCAATTTCTTCTAATGTGGAAGAGTCCCAG]
consensusID : consensus_11118#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 626 fasta sequence
[AAGATGGTTTAGCTTGAGGAAAAATTCTTGAAGAACTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATGGGATGGATTCATTGAGAATTGTATGGGTGACGATGAAACAAGTAGATTGAATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCANACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGTGATCCTTCTGGC]
[+] EMBL CD137824 [AAGATGGTTTAGCTTGAGGAAAAATTCTTGAAGAACTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATGGGATGGATTCATTGAGAATTGTATGGGTGACGATGAAACAAGTAGATTGAATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTGGTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCANACGACTAATATTAACGCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTATGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAAGGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGTGATCCTTCTGGC]
[-] EMBL CD154932 [ TTGAGGAAAAATTCTTGAAGAGCTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATGGGATGGATTCATTGACAATTGTATGGGTGACCATGAAACAAGTAGATTGAATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGCCAGATTGATTCTTGAACCGAAGGAAAATGATCCAGCAGGTATAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAAC ]
[-] EMBL CD154988 [ TTGAGGAAAAATTCTTGAAGAACTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGTTAAATTTGTCACAGGATGGGATGGATTCATTGAGAATTGTATGGGTGACGATGAAACAAGTAGATTGAATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAAC ]
[-] EMBL CD154969 [ TTGAGGAAAAATTCTTGAAGAACTATGCGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATGGGATGGATTCATCGAGAATTGTATGGGTGACGATGAAACAAGTAGATTGGATGGTGAGGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGATACAAGAGATAGAAGGTGTTGTGGCAGATTGATTCCTGAACCGAAGGAAAATGATCCAGGAGGTCTAGTACCTGCGGATCCAGTGTTTACTGTAGGTGGATTACCTGGGACACTTGGTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAAC ]
consensusID : consensus_11118#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 363 fasta sequence
[ACCCTCATAGGTTCGCAGGGTTAGGTGTACCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGCGTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCTTAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGCG]
[-] EMBL CD060708 [ACCCTCATAGGTTCGCAGGGTTAGGTGTACCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAATGCGTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATCAGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCTTAAAACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11118#0 TTTAATTAAACCATCTATGAGTGCACTGAAGATTTGAGATATCCCTCTAAGTTGCGATTG 60
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 GTTTATTTCATTAGAAACCCAAGATGGTTTAGCTTGAGGAAAAATTCTTGAAGAACTATG 120
consensus_11118#1 --------------------AAGATGGTTTAGCTTGAGGAAAAATTCTTGAAGAACTATG 40
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 CGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATG 180
consensus_11118#1 CGTCGTTGATCCACTAGTTGTTGTTGAAGTTGCACTTCCTGCTAAATTTGTCACAGGATG 100
consensus_11118#2 --------ACCCTCATAGGTTCGCAGGGTTAGGTGTACCGGATGAACTTGTTACAGC-TG 51
* ** * * * * * * * ** * * ** **** **** **
consensus_11118#0 GGATGGATTCA--TTGAGAATTGTATGGGTGACG-ATGAAACAAGTAGATTGAATGGTGA 237
consensus_11118#1 GGATGGATTCA--TTGAGAATTGTATGGGTGACG-ATGAAACAAGTAGATTGAATGGTGA 157
consensus_11118#2 GAATATTTTCCGTTTGAAGGTTACTAGCGCGGTTTACATTAGAAGCAGATCGACT--TCG 109
* ** *** **** ** * * * * * *** **** ** * *
consensus_11118#0 GGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGA 297
consensus_11118#1 GGGACCGGGAGTGAAATTATCAGTACTCACAGCAGAAATTGCGGCATTAGTGGCTGCGGA 217
consensus_11118#2 GATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGAATGTTCGGATCTAATAA-TGCG-- 166
* * * *** ***** * * ***** * *** ** * ****
consensus_11118#0 TACAAGAGATAGAAGGTGTT-GTGGCAGATTGATTCCTGAACCGAAGGA--AAATGATCC 354
consensus_11118#1 TACAAGAGATAGAAGGTGTT-GTGGCAGATTGATTCCTGAACCGAAGGA--AAATGATCC 274
consensus_11118#2 ---------TGGTTCCTGTCCGTCTCCAGTTG---CCACAATCGTAAGATCAGGTGGTTC 214
* * *** ** * *** ** ** ** * ** * ** * *
consensus_11118#0 AGGAGGTCTAGTACCTGCGGATCCAGTGTTTACT-GTAGGTGGATTACCTGGGACACTTG 413
consensus_11118#1 AGGAGGTCTAGTACCTGCGGATCCAGTGTTTACT-GTAGGTGGATTACCTGGGACACTTG 333
consensus_11118#2 AAC-GCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCTTAAAACCCGTT 273
* * * * ** **** ** ** ** * * * * ** * *
consensus_11118#0 GTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTG-- 471
consensus_11118#1 GTGGTACACATTCTGCAAACGAAGAAGGAACTTGAGACGGTAAACCGGATCTTGCTTG-- 391
consensus_11118#2 G-AGTACATTGTTTG-ACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACGCGTGAG 331
* ***** * ** * ** *** *** * * * ***** ** **
consensus_11118#0 GTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCAAACGACTAATATTAAC 531
consensus_11118#1 GTTGTTTAAACTGGCAGGTTCTACAGTTGCTTGCGAACGACCCANACGACTAATATTAAC 451
consensus_11118#2 GTCAATTAAA---GTATTCGCATCAGTATCCTGCG------------------------- 363
** ***** * * * **** * ****
consensus_11118#0 GCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTA 591
consensus_11118#1 GCCATGTGTGGTGATGACATCATTAATTGGTGTAAGTGGTGGTGGTTCTGGCAAACTGTA 511
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 TGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAA 651
consensus_11118#1 TGAAGTAGAAACTCTATGACCAACTTCACGTGAAAAGTGACGAGAATTACATGCCAAAAA 571
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 GGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGACGAGGGACCATAGTTAC 711
consensus_11118#1 GGGGTCAACTGAGTCGATTACCGTAAGTGGGGGGAGTGATGGT-----GATCCTTCTGGC 626
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 GTTAGTATGAGTAGTTGGTAGTGAATCACTGGAAGTAGTTACAGTGCGAGTAGTAGATGG 771
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 TATTGACACAACACTAGTAGGAGCATTTGTTGCAGTTATTGGAGATGAAAGTGATGCTAG 831
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 AAATGGAGCAGCTGGGAGACTAAATGTGTTTACGGATATTATTGGAATGTCAAACCGATG 891
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 GATAATAGCGGTGCGTCCATTGCCCAGAGAAGTTGTCGTCGTAGTCATCGCAGGGTTAGG 951
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 TGTACCGGATGAACTTGTTACAGCTGGAATATTTTCCGTTTGAAGGTTACTAGCGCGGTT 1011
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 TACATTAGAAGCAGATCGACTTCGGATGCGTGAAGTTGTGGAGCCAGTATTGGAAACAGA 1071
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 ATGTTCGGATCTAATAATGCGTGGTTCCTGTCCGTCTCCAGTTGCCACAATCGTAAGATC 1131
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 AGGTGGTTCAACGCTAATCCGCGCACGTATCCGACGTCTATCAGTGTCCGAAACGCTTAA 1191
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 AACCCGTTGAGTACATTGTTTGACTTGAGGAACTGGCTTTTGTTCTTTTGCAGGATCACG 1251
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 CGTGAGGTCAATTAAAGTATTCGCATCAGTATCCTGTCTTTGAGATTCATCACTTGTTGA 1311
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 TGTTTTAGGTTCCGAGTTACTACTCTGAGAAGTAGAGACGGTACTATTGACCTGTTGTGT 1371
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 CTCCCGTTCTGTCATAGTAATCACGTTGAAATCAGTTATCAAATGAAGCATATGGGCGTT 1431
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 CAAGTGTAGTAAACGGCTTACTTGGGAAAACAAACGTGGATGCCAGTTCGATACTTGAGT 1491
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 CGTTCTCCTCGTAGTTTCAATATTGTGTGATGTGTGACCAATTTCTTCTAATGTGGAAGA 1551
consensus_11118#1 ------------------------------------------------------------
consensus_11118#2 ------------------------------------------------------------
consensus_11118#0 GTCCCAG 1558
consensus_11118#1 -------
consensus_11118#2 -------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||