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Schistosoma mansoni
cluster # 11170 cluster # 11170       Sequences # 37       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11170#0 length = 1332 sequences # 14  
consensus_11170#1 length = 696 sequences # 11  
consensus_11170#2 length = 585 sequences # 5  
consensus_11170#3 length = 541 sequences # 4  
consensus_11170#4 length = 426 sequences # 2  
consensus_11170#5 length = 386 sequences # 1  

consensusID : consensus_11170#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1332
fasta sequence
                              [TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATGTGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATACACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAATACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAATGTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT-GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT-TCATTGGTGTGTTGA-TGAATGTACATCTCTTTGTGTTTG-TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]

[+] EMBL CD065228             [TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATGTGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATACACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAATACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAATGTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGCTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCACACTTCTATTTAATTGCTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI067151             [                                                                                                                                                                                                                                                                                                       GACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGAGTGTTGATTGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI067277             [                                                                                                                                                                                                                                                                                                       GACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI067701             [                                                                                                                                                                                                                                                                                                       GACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGATTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGGAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTAGTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAAATATAAACTCTTGTCTGATGAGCACATATTTGCATTACATGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD115971             [                                                                                                                                                                                                                                                                                                               AGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD161248             [                                                                                                                                                                                                                                                                                                                                                                                                CACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGA  ATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTTGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATA                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD161415             [                                                                                                                                                                                                                                                                                                                                                                                                CACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGA  ATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAACTTTTTACTCGCATATCATTTCCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD114152             [                                                                                                                                                                                                                                                                                                                                                                                                                      ATAGTTAAAAAGTCCACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTATGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTGTCTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTGTGTTTTTACTAAAGTTGCCTATCTGTATTCTGCCTATTGTAGTAGGACATCATCACCAATAGTTCTCCATGTTTGAGAT                                                                                                                                                                                                                                                                                     ]
[+] EMBL AI740221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        agcgagtATATACCTGGCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTNNTCGTTTCATATCACGATAGTTATGNNATTGGTGTGTTGA TGAATGTACATTTCTTTGTGTTGGNTGTTCTTTTATATAGCCTTTTATACTCTTAGCATTTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD078754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cgaggTAAACAT TCATTGGTGTGTCGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTCTATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGCTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGNTATTATATACACANAGAGTTCTCTCTCA                                                                                                                                                                                                                                      ]
[-] EMBL CD075718             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTTTATGCGCATACCCGAGTTATTATATACACAAAGAGTTTTTTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTTTTTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA                                                                        ]
[-] EMBL AW017136             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTG                                                                   ]
[-] EMBL CD073214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCACATATTTGCTTANCATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATAC                                                                     ]
[-] EMBL AW017177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTAATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATTAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]


>consensus_11170#0 TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATG TGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATAC ACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAAT ACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAAT GTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCC TGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTAT TGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTC TACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCTGCGTGTGTT TGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATA TCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTTTGTGTTTGTGTTCTTA TATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTC ATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTA ATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGA TTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAA TTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGA ATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACG AAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATA GGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTAT ATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGA TATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTAC ATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA TACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTA CCGTACTGCGTA



consensusID : consensus_11170#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 696
fasta sequence
                              [CGAGGACGCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGTCTGTTGACGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA-GGTCCCCTTTCC-AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG-GATATTGAG-TTCAA-TCTATT-G-GGTGATATCTCTGACTTT-AAGTCGAA-ACCTGTCTCAATC-GTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA-AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTGCCCACATGAATATACCTGCGTGTGTTTGTACCTATT]

[+] EMBL CD082103             [CGAGGACGCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGTCTGTTGACGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA GGTCCCCTTTCC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAG TTCAA TCTATT G GGTGATATCTCTGACTTT AAGTCGAA ACCTGTCTCAATC GTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTGCCCACATGAATATACCTGCGTGTGTTTGTACCTATT]
[+] EMBL CD162394             [                                                           gtGCGACTTANAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAGAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA GGTCCCCTTTGC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCA GATATTGAG TTCAA TCTATT G GGTGATACCTCTGACTTT AAGTCGca                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD068595             [                                                                                                                             CATGAATCTAGAC AAGAAGA GAGAG TTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCC TGGCACGTTTAA GGTCCCCTTTCC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAG TTCAA TCTATT G GGTGATATCTCTGACTTT AAGTCGAA ACCTGTCTCAAT                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL SM624                [                                                                                                                                                  CGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA GGTCCCNTTTCC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAG TTCAA TCTATTGG GGTGATATCTCTGACTTT AAGTCGAA ACCTGTCTCAATCGGTTGAAGGNTGCAGTTACCG                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD196594             [                                                                                                                                                                             ACTATTAGGTCCAGCCCTTGGCACGTATAATGGTCCCCTTTCCTAGAAAGATCTGCAGATGTTGTGTGCGAGAAGTACTGTATTCTCGTTGACGGGCAACCGAGATATTGAGATTCAAGTCTATT GCGGTGATATCTCTGACTTTGAAGTCGAATACCTGTCTCAGTC ATTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACAATGTACAAAGAGATATTGTGTGTGGGCTACGTTATATAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGATATGTCCGTTATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTGTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGG                                                                                                   ]
[-] EMBL CD184285             [                                                                                                                                                                                                                                                                                                                                                             cGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACAT                                                                                                                                                                                                     ]
[-] EMBL CD187172             [                                                                                                                                                                                                                                                                                                                                                                            ATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTCTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACAT                                                      ]
[-] EMBL CD186867             [                                                                                                                                                                                                                                                                                                                                                                            ATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACAT                                                      ]
[-] EMBL CD186969             [                                                                                                                                                                                                                                                                                                                                                                            ATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAGTGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGACGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACAT                                                      ]
[+] EMBL BG932032             [                                                                                                                                                                                                                                                                                                                                                                                                                  gGGACTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAG AGCCCC                                                                                                                                                                                  ]
[+] EMBL BG932027             [                                                                                                                                                                                                                                                                                                                                                                                                                  gGGACTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAG AGCCCC                                                                                                                                                                                  ]


>consensus_11170#1 CGAGGACGCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGTCTGTTGACGAA GGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAA GAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTA GGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTC GAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGAT ATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAA GTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGT AAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGT CACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGC TCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAG TGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTG CCCACATGAATATACCTGCGTGTGTTTGTACCTATT



consensusID : consensus_11170#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 585
fasta sequence
                              [GCTATTATAACACATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC-TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACA]

[+] EMBL CD193891             [GCTATTATAACACATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGANAGATCTGCAAATGTTGTNGTCGAGAAGTTCT                                                                                                                                                                                                                                                        ]
[+] EMBL SMW723               [       tgcatgATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCACGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAGGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAGGGGATATCGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAANGGCCCTATTCTAG                                                              ]
[-] EMBL CD148189             [                   TCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATT                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD116021             [                                        CTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCT                                                                ]
[+] EMBL CD190338             [                                                                                                                             GGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCGTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACA]


>consensus_11170#2 GCTATTATAACACATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCC TTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCG AGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATAC AAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGT TTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTT CCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATC GTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGT GGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTA ATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACA



consensusID : consensus_11170#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 541
fasta sequence
                              [AGGCCAGAATTCGGCACGAGGATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANNN]

[+] EMBL CD082818             [AGGCCAGAATTCGGCACGAGGATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANNN]
[-] EMBL SMT14650             [                                                                             AAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACA TCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA                       ]
[-] EMBL SMT14598             [                                                                                                                                                                                                                                                                                                                     AGANTCTATGCGCATACCCGAGNTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGNATAGATATGTATGTGTTTGGAGTGANTTTTCCGTATGACAGTCTGCAGGGAAAATCGTNAGTTACATTCGCTCTCNTCTTTACTATCAGGAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA                       ]
[-] EMBL SM623                [                                                                                                                                                                                                                                                                                                                                                                                                TGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATAC                    ]


>consensus_11170#3 AGGCCAGAATTCGGCACGAGGATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGA TTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATT TTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAAT TCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTT TACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTT CCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCA CGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATT TTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATC AGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANN N



consensusID : consensus_11170#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 426
fasta sequence
                              [TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTCCAGATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATG-TTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGTACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCATATGCTAATATCCATACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG]

[+] EMBL CD195597             [TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTCCAGATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATG TTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGTACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCATATGCTAATATCCATACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG]
[-] EMBL CD064141             [                                                        TACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTANACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGATTACAGATGAATACTAAGCACat                                                                                                                                                                                                             ]


>consensus_11170#4 TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTCCAGATAGTCTCGCTTACT GCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGG CTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAG GCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAG AGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGTACTATTAG GTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCATATGCTAATATCCAT ACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGG CAACCG



consensusID : consensus_11170#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 386
fasta sequence
                              [AATGTNNGNACCTATTANTNTNGTTACTNNATCTNCANNCTNCTATTNATTTGTTGNCGTTTCATATCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTNTGTGNTGGTNTTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCCACAGAANACTATCACTTATTGTCATNGTCATATCCTGGGGTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTNCGGCTNTGAATTATAANCNCTNGCNTGATGAGCACATATANGCTGAACATGTNTGATTGGTTGNGGCGATNTACGGTATNATANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTGGTAGGAACGGGAANTGTGTACATGAN]

[+] EMBL SM696                [AATGTNNGNACCTATTANTNTNGTTACTNNATCTNCANNCTNCTATTNATTTGTTGNCGTTTCATATCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTNTGTGNTGGTNTTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCCACAGAANACTATCACTTATTGTCATNGTCATATCCTGGGGTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTNCGGCTNTGAATTATAANCNCTNGCNTGATGAGCACATATANGCTGAACATGTNTGATTGGTTGNGGCGATNTACGGTATNATANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTGGTAGGAACGGGAANTGTGTACATGAN]


>consensus_11170#5 AATGTNNGNACCTATTANTNTNGTTACTNNATCTNCANNCTNCTATTNATTTGTTGNCGT TTCATATCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTNTGTGNTGGTN TTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCCACAGAANACTATCACTTATTG TCATNGTCATATCCTGGGGTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTN CGGCTNTGAATTATAANCNCTNGCNTGATGAGCACATATANGCTGAACATGTNTGATTGG TTGNGGCGATNTACGGTATNATANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTG GTAGGAACGGGAANTGTGTACATGAN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATG 60
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATAC 120
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      ACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAAT 180
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      ACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAAT 240
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      GTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCC 300
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTAT 360
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTC 420
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCTGCGTGTGTT 480
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATA 540
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTTTGTGTTTGTGTTCTTA 600
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTC 660
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      ATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTA 720
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      --------------------------------------------GCTATTATAACACATA 16
consensus_11170#4      -----------TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTC-CAGATA 48
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      ATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGA 780
consensus_11170#3      ---------------------AGGCCAGAATT-CGGCACGAGGATGATTGTTTGTGTCGA 38
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      GTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGA 76
consensus_11170#4      GTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGA 108
consensus_11170#1      ------------------------------------------------------------
consensus_11170#0      TTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAA 840
consensus_11170#3      TTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAA 98
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGT 136
consensus_11170#4      ATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGT 168
consensus_11170#1      ------CGAGGAC-----GCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGT 49
consensus_11170#0      TTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGA 900
consensus_11170#3      TTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGA 158
consensus_11170#5      ----------AATGTNNGNACCTATTAN-----TNTNGTTACTNNATCTNCANNCTNCTA 45
                                                 *      *    **        *           

consensus_11170#2      CTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAAC 196
consensus_11170#4      CTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAAC 228
consensus_11170#1      CTGTTGACGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAAC 109
consensus_11170#0      ATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAA-GTATGAACAAC 959
consensus_11170#3      ATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAA-GTATGAACAAC 217
consensus_11170#5      TTNATT--TGTTGNCGTTTCATATCACG-ATAGATATTCATTG-GTGT-GT-TGATGAAT 99
                        *               **           *  *     * *          ***  ** 

consensus_11170#2      GCAC-TCTGGAAGAGATCATGAATCTAGACAAAGAAG--ACGAGAGTTTGCGAAAATACA 253
consensus_11170#4      GCAC-TCTGGAAGAGATCATGAATCTAGACAAAGAAG--ACGAGAGTTTGCGAAAATACA 285
consensus_11170#1      GCAC-TCTGGAAGAGATCATGAATCTAGACAAAGAAG--ACGAGAGTTTGCGAAAATACA 166
consensus_11170#0      GAAGACTCAGATGTGTT--TGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTA 1017
consensus_11170#3      GAAGACTCAGATGTGTT--TGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTA 275
consensus_11170#5      GTACATCTCTNTGTGNTGGTNTTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCC 159
                       * *         * * *  *     **   *        *       *      *     

consensus_11170#2      AAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCT--------------- 298
consensus_11170#4      AAGAAGTACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCA 345
consensus_11170#1      AAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCT--------------- 211
consensus_11170#0      ATAGGACATCATCACCAATAGTTTTC--CATTTTTGAGATTCTATGC------------- 1062
consensus_11170#3      ATAGGACATCATCACCAATAGTTTTC--CATTTTTGAGATTCTATGC------------- 320
consensus_11170#5      ACAGAANACTATCACTTATTGT------CATNGTC-ATATCCTGGG-------------- 198
                       *      *  ** *      *       **   *  *  * *                  

consensus_11170#2      -------------------TTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGT 339
consensus_11170#4      TATGCTAATATCCATACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGT 405
consensus_11170#1      -------------------TTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGT 252
consensus_11170#0      -GCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAA 1121
consensus_11170#3      -GCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAA 379
consensus_11170#5      -GTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTNCGGCTNTGAATTAT-AA 256
                                           *  *  *     *     *            ** *     

consensus_11170#2      ATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTT 399
consensus_11170#4      ATTCTCGTTGAGGGGCAACCG--------------------------------------- 426
consensus_11170#1      ATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTT 312
consensus_11170#0      TAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGT-ATGACAGTCTG 1180
consensus_11170#3      TAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGT-ATGACAGTCTG 438
consensus_11170#5      NCNCTNGCNTGA---TGAGCACATATANGCTGAACATGTNTGATTGGTTGNGGCGATNTA 313
                           * *                                                     

consensus_11170#2      AAGTCGAAAC---CTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTAC 456
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      AAGTCGAAAC---CTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTAC 369
consensus_11170#0      CAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTA 1240
consensus_11170#3      CAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTA 498
consensus_11170#5      CGGTATNA-----TANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTGGTA----- 363
                                                                                   

consensus_11170#2      TATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCT 516
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      TATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCT 429
consensus_11170#0      TTTTCTTTTGCAATAAAACATACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAA 1300
consensus_11170#3      TTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANNN----------------- 541
consensus_11170#5      ---------GGAACGGGAANTG----TGTACATGAN------------------------ 386
                                                                                   

consensus_11170#2      ATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACAT 576
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACAT 489
consensus_11170#0      CATGCCATGCAGCTGCATTACCGTACTGCGTA---------------------------- 1332
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ATCTGGACA--------------------------------------------------- 585
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAA 549
consensus_11170#0      ------------------------------------------------------------
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      ATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATT 609
consensus_11170#0      ------------------------------------------------------------
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ------------------------------------------------------------
consensus_11170#4      ------------------------------------------------------------
consensus_11170#1      AATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTGCCCACATGA 669
consensus_11170#0      ------------------------------------------------------------
consensus_11170#3      ------------------------------------------------------------
consensus_11170#5      ------------------------------------------------------------
                                                                                   

consensus_11170#2      ---------------------------
consensus_11170#4      ---------------------------
consensus_11170#1      ATATACCTGCGTGTGTTTGTACCTATT 696
consensus_11170#0      ---------------------------
consensus_11170#3      ---------------------------
consensus_11170#5      ---------------------------
                                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)