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Schistosoma mansoni
cluster # 11183 cluster # 11183       Sequences # 38       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11183#0 length = 1606 sequences # 31  
consensus_11183#1 length = 679 sequences # 2  
consensus_11183#2 length = 472 sequences # 2  
consensus_11183#3 length = 461 sequences # 1  
consensus_11183#4 length = 397 sequences # 2  

consensusID : consensus_11183#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 31
consensus length = 1606
fasta sequence
                              [AGGCCAANAATGACTATTCTA-TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT-AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA-TGTACTCGGACAAATCATC-AATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTGGAACTAATGACA-GAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA-TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA-ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC-TTATTAAATCAGTTTTCTCA-TTTTTTTTTTCTTTCTTAATTTTCAATGTTG-A-ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT-GACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTTTCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTCGTATGAACTTTACTTCCTTGAATATTTTGAT-AAAAAAAAAACAATTCCATAAAATAGATATAATACATCCGTACGTACATGCAAATAATGAAT-TTTTTTTTATCCGTCCATTCTTATTTCATTAATCTTCATTTGTTATTGTTGTTTGTTTATTTTAGTTTGTTCGTTTGTTTGTTTGTTTTTCACG-CATTTCATTTATGAAAATTGATCAATAAATCAAAACCAT]

[+] EMBL CD082744             [AGGCCAANAAT TCGGCACGAGGGCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAAGATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGGTGTAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCANGTGAGAANAAATGGGGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067494             [           GACTATTCTA TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGANAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD084200             [     agtatcGACTATTCTA TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067893             [           GACTATTCTA TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACACCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI975535             [                    A TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGGAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGCATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI976424             [                    A TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGGAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTNTAAACATTTATGCATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATG TGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI975002             [                    A TTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGGAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGCATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD132183             [                                                                         ACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAAGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGT AAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD128290             [                                                                                                                                                       AAATTTCAATCCAGAAAATGATTGTGTACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCAGTTCTTGTAAAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTACTGTACTCGGACAAATCATCAAATCGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAATGGTGATACATCTGGAGATTTTAAACATTTATGTAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD076334             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGTACTGATTGAGATTCTA TGTACTCGGACAAATCATC AATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTGGAACTAATGACA GAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD112127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGGTGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAGTCTATGAAAGGAGCTGGAACTAATGACA GAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD112489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACGCTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTGGAACTAATGACG GAGATTTAATTCGTATTATAGTGTCGCGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI447071             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATTTTTGTTTGACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCCTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAATGTGCAAATAACAAAGCATTATATTTTGCTGACAAATT AAAAAATCTATGAAAGGAGCTGGAACTAATGACA GACATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTAT AAAAAAAACAAAAGAGATTATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATT ACTGGATCATATTCATTAC AAATGTTATTC TTATTAAATCAG TTTCTCA ATTTTTTTTTC TTC TAAATTTCAATGTTG A A ATTTTAATTGGTT AAAAAATA TTAGTTACTA GCAT GACTAA C AGAGTGTTGGTTAA TGGTTTG TTTTCGC TACG CACC TTTTTTTC ACC TTC TA TACAATTTAc                                                                                                                                                                                                                                                                           ]
[-] EMBL CD112565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCACATAACAAAGCATTATATTTTGCTGACAAATTAAAAGAATCTATGAAAGGAGCTGGAACTAATGACACGAGATCTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAGTTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGATTACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAATATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI740335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACAAATTAAAAAAATCTATGAAAGGAGCTGGAACTAATGACA GAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL SMAA14099            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGACA GAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD130304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAACTAACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD183958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAAGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTACTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD184034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAAGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTACTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD165258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTCTTTATT AATCAGNTTTCTCATTTTTTTTTTTCTTTTCTAATTTCCATGGNTG ATAT TTTTAATTGGT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD130216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD130265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         tnAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGGCTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCACTTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTTT                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL AI976919             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGATTTACATTTGATTAAGA AGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGNCTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTTTCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTCGTATGAACTTTACTTCCTTGAA                                                                                                                                                                                                               ]
[-] EMBL CD112079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAG ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD075190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI111111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACTTGTTCGTACAA ATTTATAAAAAAAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTNCAATGTTGAA ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTNGTTTAATTGTTTNGTTTTTCGCTTACGTCACCTTTTTTTTCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTCGTATGAACTTTACTTCCTTGAATATTTTGATAAAAAAAAAAACAATTCCATAAAATAGATATAATACATCCGTACGTACATGCAAATAATGAATATTTTTTTTATCCGTCCATTCTTATTTCATTAANCTNCATTTGTTATTGTGGTTNGTTTATTTAAGTTGGTNCGTTTGT                                                        ]
[-] EMBL AI976830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATTGTCTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATCTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTTTCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTCGTATGAACTTTACTTCCTTGAA                                                                                                                                                                                                               ]
[+] EMBL SMAA14128            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AACATTATTTCATAATTAACTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTTCAATGAAG A ANNTTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGC                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BF936176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATTATTTCATAATTACCTGGATCATATTCATTACAAAATGTTATTC TTATTAAATCAGTTTTCTCA TTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTTTCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTCGTATGAACTTTACTTCCTTGAATATTTTGAT AAAAAAAAAACAATTCCATAAAATAGATATAATACATCCGTACGTACATGCAAATAATGAAT TTTTTTTTATCCGTCCATTCTTATTTCATTAATCTTCATTTGTTATTGTTGTTTGTTTATTTTAGTTTGTTCGTTTGTTTGTTTGTTTTTCACGCCATTTCATTTATGAAAATTGATCAATAAATCAAAACCAT]
[+] EMBL SM0332               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTTTTTTTTCTTTCTTAATTTTCAATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATCGATCGA TAATCTGGTTTTTTGTTTAATTG TTTG TTTTCGCTTACGTCACCT                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD075189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AATGTTG A ATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGCAT GACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTTTCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTCGTATGAACTTTACTTCCTTGAATATTTTGAT AAAAAAAAAACAATTCCATAAAATAGATATAATACATCCGTACGTACATGCAAATAATGAAT TTTTTTTTATCCGTCCATTCTTATTTCATTAATCTTCATTTGTTATTGTTGTTTGTTTATTTTAGTTTGTTCGTTTGTTTGTTTGTTTTTCACG AATTTCATTTATGAAAATTGATCAATAAATCATTACCAT]


>consensus_11183#0 AGGCCAANAATGACTATTCTATTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTT TAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTC AAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACG ATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGG TCATCGTTCCGCAGATCAGCGTGCAGTTCTTGTAAAAAAATTTAAATCACTGTTTGGAAA AGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGC ATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGC TGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAA GCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGG TGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGA ATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGG TGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCC TGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGA TGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTG TGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTGG AACTAATGACAGAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTT GATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGTGA TACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAAATTTATAAAAAAA AACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATTAA CTGGATCATATTCATTACAAAATGTTATTCTTATTAAATCAGTTTTCTCATTTTTTTTTT CTTTCTTAATTTTCAATGTTGAATATTTTAATTGGTTAAAAAAATATTTAGTTACTATGC ATGACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTTTC TACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACTTC GTATGAACTTTACTTCCTTGAATATTTTGATAAAAAAAAAACAATTCCATAAAATAGATA TAATACATCCGTACGTACATGCAAATAATGAATTTTTTTTTATCCGTCCATTCTTATTTC ATTAATCTTCATTTGTTATTGTTGTTTGTTTATTTTAGTTTGTTCGTTTGTTTGTTTGTT TTTCACGCATTTCATTTATGAAAATTGATCAATAAATCAAAACCAT



consensusID : consensus_11183#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 679
fasta sequence
                              [CAGGCCAGAATTAGGCACGAGGTCTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTGGAACTAATGACAGAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTT]

[+] EMBL CD081357             [CAGGCCAGAATTAGGCACGAGGTCTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTGGAACTAATGACAGAGATTTAATTCGTATTATAGTGTCACGTTGTGAAATTGATTTACATTT]
[+] EMBL CD190906             [                                                              TACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGCATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACAT                                                                                                                                                                                                                                                                                                                                         ]


>consensus_11183#1 CAGGCCAGAATTAGGCACGAGGTCTGATTGAAAATTTTAAATCTGAACTTAGTGGACACT TTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTAC ACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTC GGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATC TTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGT TACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTG AAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAA TTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGA GTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTC TTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAA AATCTATGAAAGGAGCTGGAACTAATGACAGAGATTTAATTCGTATTATAGTGTCACGTT GTGAAATTGATTTACATTT



consensusID : consensus_11183#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 472
fasta sequence
                              [GCATTGAATTCTGATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTCA]

[+] EMBL CD112218             [GCATTGAATTCTGATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTCA]
[+] EMBL CD112107             [GCATTGAATTCTGATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGCTATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAA                      ]


>consensus_11183#2 GCATTGAATTCTGATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATT ACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATGTAC TCGGACAAATCATCAATTGAAGCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAA TCTTGAAAGTGATGTAAGTGGTGATACATCTGGAGATTTTAAACATTTATGTATTGCATT GTTACAAGCAAGCAGAGATGAATCTACACATGTTGATCTACAACTTGCACATAAAGATGC TGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCA AATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGT GAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTCA



consensusID : consensus_11183#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 461
fasta sequence
                              [AAATTTGGGAGTATTCGACTATTCTATTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCGGTTCTTGTAAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATG]

[+] EMBL CD180937             [AAATTTGGGAGTATTCGACTATTCTATTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGCAGATCAGCGTGCGGTTCTTGTAAAAAAATTTAAATCACTGTTTGGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATG]


>consensus_11183#3 AAATTTGGGAGTATTCGACTATTCTATTCTTGATATATTGATCTAATCGTAAAAGAAGTT TACTTTAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGT GGTTCAAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGT GAACGATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATA ATGGGTCATCGTTCCGCAGATCAGCGTGCGGTTCTTGTAAAAAAATTTAAATCACTGTTT GGAAAAGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATG GAAGCATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAA GGAGCTGGTACAAATGAATCTGTACTGATTGAGATTCTATG



consensusID : consensus_11183#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 397
fasta sequence
                              [TTTCGGGCGAGGAAAAATTCTAACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAATCTATGAAAGGAGCTGGAACTAATGACAGAGATTTAATTCG-A-TA-AGT---AC---GTGGAATGA-TACATTGAT--AGAGGGAATTTACGATCTAGCTGGTGATTC]

[+] EMBL SMAA25577            [TTTCGGGCGAGGAAAAATTCTAACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAATCTATGAAAGGAGCTGGAACTAATGACAGAGATTTAATTCG A TA AGT   AC   GTGGAATGA TACATTGAT  AGAGG                         ]
[+] EMBL SMAA28920            [  TCGGGCGAGG GANATTCT ACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGTGTGC AATAACAAAGCATTATA TTTGCTGACAAATTAAAAAATCTATGAAA GAGCTGGAACTAATGACAGAGATTT ATTCGTATTATAGTGTCACGTTGTGAAATGATTACATTGATTAAGAGAGAATTTACGATCTAGCTGGTGATTC]


>consensus_11183#4 TTTCGGGCGAGGAAAAATTCTAACACATGTTGATCTACAACTTGCACATAAAGATGCTGA AGCCCTATATCAAGCAGGTGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAAT TTTTGTTTCACGATCTCCTGAACACTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAG TAAGAAAACTTTAGAAGATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCT TTTGGCCATTGTTCAGTGTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAA TCTATGAAAGGAGCTGGAACTAATGACAGAGATTTAATTCGATAAGTACGTGGAATGATA CATTGATAGAGGGAATTTACGATCTAGCTGGTGATTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      AGGCCAANAATGACTATTCTATTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTT 60
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TAGTTGAATTCAACGAAATATGGCTGGAAATTTAGGATTTAATGTTGGGTCATGTGGTTC 120
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      AAATGTACATCCAACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACG 180
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      ATTAAGAAATGCTATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGG 240
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      -----------------------------------------CAGGCCAGAATTAGGCACG 19
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TCATCGTTCCGCAGATCAGCGTGCAGTTCTTGTAAAAAAATTTAAATCACTGTTTGGAAA 300
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      AGGTCTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGC 79
consensus_11183#2      ---------------------------------------GCATTGAATTCTGATGGAAGC 21
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      AGATTTGATTGAAAATTTTAAATCTGAACTTAGTGGACACTTTTACGACACTATGGAAGC 360
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGC 139
consensus_11183#2      ATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGC 81
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      ATTGTGTTTAAGTCCATCAGAATTCGATGCCCGTGAATTACACAGAGCTATGAAAGGAGC 420
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      TGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAA 199
consensus_11183#2      TGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAA 141
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TGGTACAAATGAATCTGTACTGATTGAGATTCTATGTACTCGGACAAATCATCAATTGAA 480
consensus_11183#3      -------------------------------------AAATTTGGGAGTATTCGACTATT 23
                                                                                   

consensus_11183#1      GCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGG 259
consensus_11183#2      GCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGG 201
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      GCAGATAAAAGAAGCTTATAAACTATTCACTGGACGTAATCTTGAAAGTGATGTAAGTGG 540
consensus_11183#3      CTATTCTTGATATATTGATCTAATCGTAAAAGAAGTTTACTTT---AGTTGAATTCAACG 80
                                                                                   

consensus_11183#1      TGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGA 319
consensus_11183#2      TGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGA 261
consensus_11183#4      ----------------------------------------TTTCGGGCGAGGAAAAAT-- 18
consensus_11183#0      TGATACATCTGGAGATTTTAAACATTTATGTATTGCATTGTTACAAGCAAGCAGAGATGA 600
consensus_11183#3      AAATATGGCTGGAAATTTAGGA---TTTAATGTTGGGTCATGTGGTTCAAATGTACATCC 137
                                                               *      * *    * **  

consensus_11183#1      ATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGG 379
consensus_11183#2      ATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGG 321
consensus_11183#4      TCTAACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGG 78
consensus_11183#0      ATCTACACATGTTGATCTACAACTTGCACATAAAGATGCTGAAGCCCTATATCAAGCAGG 660
consensus_11183#3      AACTCTGTTCCCTGCATCAAATTTCAATCCAGAAAATGATTGTGAACGATTAAGAAATGC 197
                                   **    * *  *    *   ** *** *   *  * **    *   * 

consensus_11183#1      TGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCC 439
consensus_11183#2      TGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCC 381
consensus_11183#4      TGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCC 138
consensus_11183#0      TGAGAAAAAATGGGGAACTGATGAATCAAAATTTATTCAAATTTTTGTTTCACGATCTCC 720
consensus_11183#3      TATGGCAGGATTAGGGACAAATGAACAAGATTTAATTGATATAATGGGTCATCGTTCCGC 257
                       *  *  *  **  ** **  *****  * * ** *** * **  * * *   ** **  *

consensus_11183#1      TGAACA-CTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAG 498
consensus_11183#2      TGAACA-CTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAG 440
consensus_11183#4      TGAACA-CTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAG 197
consensus_11183#0      TGAACA-CTTAAAAGCCGTATGTCGAGAATACAGTAATGTGAGTAAGAAAACTTTAGAAG 779
consensus_11183#3      AGATCAGCGTGCGGTTCTTGTAAAAAAATTTAAATCAC-TGTTTGGAAAAGATTTGATTG 316
                        ** ** * *      * * *    * * *  * * *  **  *   ***  ***    *

consensus_11183#1      ATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGT 558
consensus_11183#2      ATGCTTTAAAATCTGAAATGTCAGGAAATTCA---------------------------- 472
consensus_11183#4      ATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGT 257
consensus_11183#0      ATGCTTTAAAATCTGAAATGTCAGGAAATTTACTACAGGCTCTTTTGGCCATTGTTCAGT 839
consensus_11183#3      AAAATTTTAAATCTGAACTTAGTGGACACTT-TTACGACACTATGGAAGCATTGT----- 370
                       *   *** ********* *    *** * *                              

consensus_11183#1      GTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTG 618
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      GTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAA-TCTATGAAAGGAGCTG 316
consensus_11183#0      GTGCAAATAACAAAGCATTATATTTTGCTGACAAATTAAAAAAATCTATGAAAGGAGCTG 899
consensus_11183#3      GTTTAAGTCCATCAGAATTCGAT---GCCCGTGAATTACACAGAGCTATGAAAGGAGCTG 427
                                                                                   

consensus_11183#1      GAACTAATGACAGAGATTTAATTCGTATTATA-GTGTCACGTTGTGAAATTGATTTACAT 677
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      GAACTAATGACAGAGATTTAATTCGATAAGTACGTGGAATGATACATTGATAGAGGGAAT 376
consensus_11183#0      GAACTAATGACAGAGATTTAATTCGTATTATA-GTGTCACGTTGTGAAATTGATTTACAT 958
consensus_11183#3      GTACAAATGAATCTGTACTGATTGAGATTCTATG-------------------------- 461
                                                                                   

consensus_11183#1      TT---------------------------------------------------------- 679
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      TTACGATCTAGCTGGTGATTC--------------------------------------- 397
consensus_11183#0      TTGATTAAGAGAGAATTTTACGATCTAGCTGGTGATTCTTTAGAATCTTGGATTGAAGGT 1018
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      GATACCAGTGGAGATTATCGTAGTTTGTTATTAGCACTTGTTCGTACAAATTTATAAAAA 1078
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      AAAACAAAAGAGAATATTGACTAGAATGAACGTATTGAATATTAACATTATTTCATAATT 1138
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      AACTGGATCATATTCATTACAAAATGTTATTCTTATTAAATCAGTTTTCTCATTTTTTTT 1198
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TTCTTTCTTAATTTTCAATGTTGAATATTTTAATTGGTTAAAAAAATATTTAGTTACTAT 1258
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      GCATGACTAATCTGGTTTTTTGTTTAATTGTTTTGTTTTTCGCTTACGTCACCTTTTTTT 1318
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TCTACCTTTCTTATTACTATTTATCACTATTATTGTTATCAGTATTACACTAAAGAAACT 1378
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TCGTATGAACTTTACTTCCTTGAATATTTTGATAAAAAAAAAACAATTCCATAAAATAGA 1438
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TATAATACATCCGTACGTACATGCAAATAATGAATTTTTTTTTATCCGTCCATTCTTATT 1498
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
consensus_11183#4      ------------------------------------------------------------
consensus_11183#0      TCATTAATCTTCATTTGTTATTGTTGTTTGTTTATTTTAGTTTGTTCGTTTGTTTGTTTG 1558
consensus_11183#3      ------------------------------------------------------------
                                                                                   

consensus_11183#1      ------------------------------------------------
consensus_11183#2      ------------------------------------------------
consensus_11183#4      ------------------------------------------------
consensus_11183#0      TTTTTCACGCATTTCATTTATGAAAATTGATCAATAAATCAAAACCAT 1606
consensus_11183#3      ------------------------------------------------
                                                                       




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)