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Schistosoma mansoni
cluster # 11198 cluster # 11198       Sequences # 38       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11198#0 length = 855 sequences # 29  
consensus_11198#1 length = 781 sequences # 6  
consensus_11198#2 length = 296 sequences # 1  
consensus_11198#3 length = 234 sequences # 1  
consensus_11198#4 length = 207 sequences # 1  

consensusID : consensus_11198#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 29
consensus length = 855
fasta sequence
                              [CGCAACTTATTTATTTAAATCATAGCTTTAAGTAATCGGTTTATATAGGTTTCTCGGTTGCCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG-GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG-TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA-ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC-GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC-TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCTGTAGATTCAAAGACACAAACAGGCGCCAGGCAGAGGTA]

[+] EMBL CD074392             [CGCAACTTATTTATTTAAATCATAGCTTTAAGTAATCGGTTTATATAGGTTTCTCGGTTGCCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTT                                                                                                                                                                                                                                                                       ]
[-] EMBL BG931600             [                                                     TCGGTTGCCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGAa                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD117035             [                                                           GCCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATCCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCTCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATANTAGTCTG                                                                                                                                                                                                                         ]
[+] EMBL CD117124             [                                                           GCCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACACCATGTTTGAAGTTGGCCCCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATCCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD117742             [                                                           GCCAAAATCACCACCTTCAACAAAGTGTTCTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCCTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAA                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD117683             [                                                           GCCAAAATCACCACCTTCAACAAAGTGTTCTCCTTTCTTGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGA                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD194335             [                                                                                                 TGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCTTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGT                                                                                                                                                                                                                  ]
[-] EMBL CD117206             [                                                                                                 TGCGAAAACCGCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGT                                                                                                                                                                                                                        ]
[-] EMBL CD083990             [                                                                                                           GCCACTAGGATTGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACAGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTCCT                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD144414             [                                                                                                                      TGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTANAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATCGCANCAACATCCCGTTGTTGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD144390             [                                                                                                                      TGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTANAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD144436             [                                                                                                                      TGCTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTACATGTACAAGGTCCTCAACGCATATTNAACC AGATGTCCAAGTTTTGTGTTGAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD118284             [                                                                                                                         TCAACTTCAATGTCCATATAAAAGCATCAGCATGTTTAAAGTTTG GTCCAACTGTATATATTTCATGTCCAAGGTCCTCGACGCATATTAATCCAAGATGTCCAAG TGTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTT ACGACACAATTTTTAGAGTAGGATAACCCCAAGCGACGTACGGATCAATTATTAGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCT                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD147311             [                                                                                                                               TGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATCGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD122711             [                                                                                                                                 AATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTG GTCCAACTGTATATATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGCTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTAAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCGATTTTCGTCGTCT                                                                                                                                                                         ]
[+] EMBL CD121438             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTC                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD121447             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTC                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD121444             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTC                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD121487             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGACAT                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD121415             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD121491             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTT                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD121449             [                                                                                                                                                                                    TATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGA ACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD111495             [                                                                                                                                                                                                                                                                                                                                                  AGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGC TCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATT                                                   ]
[-] EMBL CD148768             [                                                                                                                                                                                                                                                                                                                                                   GCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCTGTAGATTCAAAGACACAAACAGGCGCCAGGCAGAGGTA]
[-] EMBL CD111397             [                                                                                                                                                                                                                                                                                                                                                                                               ATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTACTCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAG TTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCT                                      ]
[+] EMBL CD111308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCAC GACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGC                                       ]
[-] EMBL CD111065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGCAC GACAAACGCGAGTTTTGCTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGC TCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCat                                     ]
[-] EMBL CD184109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCATAGCCATTCTGCGGTACTCATGCATGTATTTTCCCGC TCTATGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTATGCGAGATACTGTAATCAATGTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTTTGGCTTCATAGGTCTCTCAGAAGTAGCTGACTGAGCATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCTGTACATTCAAAGACACAAACAGGCGCCAGGCAGAGGTA]
[+] EMBL CD163639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTTTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCTGTAGATTCAAAG                          ]


>consensus_11198#0 CGCAACTTATTTATTTAAATCATAGCTTTAAGTAATCGGTTTATATAGGTTTCTCGGTTG CCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTG CTCAACTTGAATGTCCATAGAAAAGCAACAGCATGTTTGAAGTTTGGTCCAACTGTATAT ATTTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAGTTTGTGTTGAATT AGCTCATTTGTTAAAGGGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATG AGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGA AGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGG CGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGC ACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTA CGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCT CTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGA GCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTC CTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGACATGATCTGT TCACGATGGCACCTAACAGATATTAAACTGTCACGCTGTAGATTCAAAGACACAAACAGG CGCCAGGCAGAGGTA



consensusID : consensus_11198#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 781
fasta sequence
                              [CACTATTTATTTAATCTAGCTTAAGTATCGGTTTAATAGGTTTTCGGTGCCNAAATCACACCCTTCANCAANGTGTTTCCTTTCTGCGAANNCCGCCACTAGATTGCTCACTGAAATGTCCATAGNAAAGCAACAGCATGTTGAAGTTTGGTCCAACTGTATATATNTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAGTTTG-TGTTGAATTAG-CTCATTTG--TTAAAGGGAGTCGTGTA-CCAT-GGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGAGCCCTCGTGCCGAATTTTTGGCCTCGG]

[-] EMBL CD080481             [CACTATTTATTTAATCTAGCTTAAGTATCGGTTTAATAGGTTTTCGGTGCCNAAATCACACCCTTCANCAANGTGTTTCCTTTCTGCGAANNCCGCCACTAGATTGCTCACTGAAATGTCCATAGNAAAGCAACAGCATGTTGAAGTTTGGTCCAACTGTATATATNTCATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAGTTTG TGTTGAATTAG CTCATTTG  TTAAAGGGAGTCGTGTA CCAT GGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACGTCCGAGCCCTCGTGCCGAATTTTTGGCCTCGG]
[-] EMBL CD187051             [                                                                                                                                                                         ATGTACAAGGTCCTCAACGCATATTAAACCAAGATGTCCAAGTTTGTTGTTGAATTAGCCTCATTTGGTTTAAAGGGAGTCGTGTACCCATGGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAA                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD134275             [                                                                                                                                                                                                TTAAACCAAGATGTCCAAGTTTG TGTTGAATTAG CTCATTTG  TTAAAGGGAGTCGTGTA CCAT GGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATCGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGGCTGAGTATCAGTTT                                        ]
[+] EMBL CD165848             [                                                                                                                                                                                                      CAAGATGTCCAAGTTTG TGTTGAATTAG CTCATTTG  TTAAAGGGAGTCGTGTA CCAT GGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGC                                                                                                                                           ]
[-] EMBL CD165595             [                                                                                                                                                                                                                AAGTTTG CGTTGAATTAG CTCATTTG  TTAAAGGGAGTCGTGTA CCAT GGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATA TCTTTTTTGGGCacgcag                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD154996             [                                                                                                                                                                                                                   TTTG TGTTGAATTAG CTCATTTG  TTAAAGGGAGTCGTGTA CCAT GGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGCAT                                                                                                                                                                                                                  ]


>consensus_11198#1 CACTATTTATTTAATCTAGCTTAAGTATCGGTTTAATAGGTTTTCGGTGCCNAAATCACA CCCTTCANCAANGTGTTTCCTTTCTGCGAANNCCGCCACTAGATTGCTCACTGAAATGTC CATAGNAAAGCAACAGCATGTTGAAGTTTGGTCCAACTGTATATATNTCATGTACAAGGT CCTCAACGCATATTAAACCAAGATGTCCAAGTTTGTGTTGAATTAGCTCATTTGTTAAAG GGAGTCGTGTACCATGGTACTTACAAAATCCGCGTTTATAAATGAGTTGACGAACAATTT TAAGACTAGGATAACCCCAAGCGACGTACGGATCAATTATTCGAAGCATGTTAAGAGTTG CCTTATTTAATAGCACAAACATCCCGTTGTTGATTTGCCGGAGGCGAAACAGTTGCATAG TCTTTCTTGGGCGTGGGTGGACACCGTTAATACCCCGGATTCGCACGACAAACGCGAGTT TTGGTTCAGCTGGAACATAGAAGTCTCCCGTCTTCTTAGCATTACGCTGCAACGTCATTT CCCGCTTTGCCATTCTGCGGTACTCATGCATGTATTTTTCCGCTCTTTGCTTCATGAGAG ACTTTAACTTCATATAAGTCTGTCGGCGTATCACCTTTTTGCGAGCTACTGTAATCAATT TTCGTCGTCTAATCTTTTCCTTCACGCGGAGACCTTCTGGCTTCCTAGGTCTCTTAGGAG TAGCTGACTGAGTATCAGTTTTTTTTACGTCCGAGCCCTCGTGCCGAATTTTTGGCCTCG G



consensusID : consensus_11198#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 296
fasta sequence
                              [TGAATGTCCANAGAAAAACCAACAGCATGTTTGAAGNNNTGGNCCCACTGTATATATTTCATGTACNAGGTCCTCCNACGCATATTAAACCNAGATGTCCAAGTTTGTTGGTGAATTAGCTCATTTGTTAAAAGGGAGTCGTGTACCNTGGTACTTACCCAAATCCGCGTTTATAAATGAGTTGACGANCAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGNTCAATTANTCGAAGCATGTTAAGAGTTGCCTTANTTAATCGCACCAACATCCCGTTGTTGATTTTCCGG]

[-] EMBL SM287                [TGAATGTCCANAGAAAAACCAACAGCATGTTTGAAGNNNTGGNCCCACTGTATATATTTCATGTACNAGGTCCTCCNACGCATATTAAACCNAGATGTCCAAGTTTGTTGGTGAATTAGCTCATTTGTTAAAAGGGAGTCGTGTACCNTGGTACTTACCCAAATCCGCGTTTATAAATGAGTTGACGANCAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGNTCAATTANTCGAAGCATGTTAAGAGTTGCCTTANTTAATCGCACCAACATCCCGTTGTTGATTTTCCGG]


>consensus_11198#2 TGAATGTCCANAGAAAAACCAACAGCATGTTTGAAGNNNTGGNCCCACTGTATATATTTC ATGTACNAGGTCCTCCNACGCATATTAAACCNAGATGTCCAAGTTTGTTGGTGAATTAGC TCATTTGTTAAAAGGGAGTCGTGTACCNTGGTACTTACCCAAATCCGCGTTTATAAATGA GTTGACGANCAATTTTAAGACTAGGATAACCCCAAGCGACGTACGGNTCAATTANTCGAA GCATGTTAAGAGTTGCCTTANTTAATCGCACCAACATCCCGTTGTTGATTTTCCGG



consensusID : consensus_11198#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 234
fasta sequence
                              [CTTATTTATTTATCTCTATAGCTTTTAGAATCGGTTTATATAGGTTTCTCGTTGCCAAAATCACCACCTTCAACAAAGTGGTTTCCCTTTTTGCGAAAACCGCCACTAGGATTGCTCAACTTGTATGTCCATAGAATAGCAACAGCATGTTTTTAAGTTTGGTCCAACTGTATATTTTTTTTGTACAAGGTCCTCAACGCATATTATCCCAAGATGTCCAAGTTTGTTTTGAAT]

[+] EMBL SMAA40600            [CTTATTTATTTATCTCTATAGCTTTTAGAATCGGTTTATATAGGTTTCTCGTTGCCAAAATCACCACCTTCAACAAAGTGGTTTCCCTTTTTGCGAAAACCGCCACTAGGATTGCTCAACTTGTATGTCCATAGAATAGCAACAGCATGTTTTTAAGTTTGGTCCAACTGTATATTTTTTTTGTACAAGGTCCTCAACGCATATTATCCCAAGATGTCCAAGTTTGTTTTGAAT]


>consensus_11198#3 CTTATTTATTTATCTCTATAGCTTTTAGAATCGGTTTATATAGGTTTCTCGTTGCCAAAA TCACCACCTTCAACAAAGTGGTTTCCCTTTTTGCGAAAACCGCCACTAGGATTGCTCAAC TTGTATGTCCATAGAATAGCAACAGCATGTTTTTAAGTTTGGTCCAACTGTATATTTTTT TTGTACAAGGTCCTCAACGCATATTATCCCAAGATGTCCAAGTTTGTTTTGAAT



consensusID : consensus_11198#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence
                              [TNNTTCAAACTTGAATGTCCCATAGNAAAGNCGANCAGNCATGTTTGANNAAAAATCCAACCTGTATATATTTTCATGTACAAGGTTCCTCNACGCATATTAAAACCAAGATGTNCCAAGTTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTNGTGTAGCCATGGTACTTACAAAATGCCGCGTTTATAAATGAGTTGACGAACA]

[-] EMBL AA559364             [TNNTTCAAACTTGAATGTCCCATAGNAAAGNCGANCAGNCATGTTTGANNAAAAATCCAACCTGTATATATTTTCATGTACAAGGTTCCTCNACGCATATTAAAACCAAGATGTNCCAAGTTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTNGTGTAGCCATGGTACTTACAAAATGCCGCGTTTATAAATGAGTTGACGAACA]


>consensus_11198#4 TNNTTCAAACTTGAATGTCCCATAGNAAAGNCGANCAGNCATGTTTGANNAAAAATCCAA CCTGTATATATTTTCATGTACAAGGTTCCTCNACGCATATTAAAACCAAGATGTNCCAAG TTTGTGTTGAATTAGCTCATTTGTTAAAGGGAGTNGTGTAGCCATGGTACTTACAAAATG CCGCGTTTATAAATGAGTTGACGAACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      ---------------CACTATTTATTTAATCTAGCTTAAGTATCGGTTTAATAGGTTTTC 45
consensus_11198#0      CGCAACTTATTTATTTAAATCATAGCTTTAAGTAATCGGTTTATATAGGTTTCTCGGTTG 60
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      --------------------------------------------------------TNNT 4
consensus_11198#1      GGTGCCNAAATCACACCCTTCANCAANGTGTTTCCTTTCTGCGAANNCCGCCACTAGATT 105
consensus_11198#0      CCAAAATCACCACCTTCAACAAAGTGTTTTCCTTTCTTGCGAAAACCGCCACTAGGATTG 120
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      -------TGAATGTCC-ANAGAAAAACCAAC--AGCATGTTTGAAGNNNTGGNCCCACTG 50
consensus_11198#4      TCAAACTTGAATGTCCCATAGNAAAGNCGANCAGNCATGTTTGANNAAAAATCCAACCTG 64
consensus_11198#1      GCTCACTGAAATGTCC-ATAGNAAAGC-AAC--AGCATGTT--GAAGTTTGGTCCAACTG 159
consensus_11198#0      CTCAACTTGAATGTCC-ATAGAAAAGC-AAC--AGCATGTTTGAAGTTTGGTCCAA-CTG 175
consensus_11198#3      -----CTTATTTATTTATCTCTATAGCTTTTAGAATCGGTTT-ATATAGGTTTCTCGTTG 54
                                  * *        * *             ***            *    **

consensus_11198#2      TATATATTT-CATGTACNAGGTCCTCCNACGCATATTAAA-CCNAGATGTCCAAGTTTGT 108
consensus_11198#4      TATATATTTTCATGTACAAGGTTCCTCNACGCATATTAAAACCAAGATGTNCCAAGTTTG 124
consensus_11198#1      TATATATNT-CATGTACAAGGT-CCTCAACGCATATTAAA-CCAAGATGTCC-AAGTTTG 215
consensus_11198#0      TATATATTT-CATGTACAAGGT-CCTCAACGCATATTAAA-CCAAGATGTCC-AAGTTTG 231
consensus_11198#3      CCAAAATCACCACCTTCAACAAAGTGGTTTCCCTTTTTG--CGAAAACCGCCACTAGGAT 112
                          * **   **  * * *            * * **    *  * *    *        

consensus_11198#2      TGGTGAATTAGCTCATTTGTTAAAAGGGAGTCGTGTA-CCNTGGTACTTACCCAAATCCG 167
consensus_11198#4      TGTTGAATTAGCTCATTTGTTAAA-GGGAGTNGTGTAGCCATGGTACTTACAAAATGCCG 183
consensus_11198#1      TGTTGAATTAGCTCATTTGTTAAA-GGGAGTCGTGTA-CCATGGTACTTACAAAAT-CCG 272
consensus_11198#0      TGTTGAATTAGCTCATTTGTTAAA-GGGAGTCGTGTA-CCATGGTACTTACAAAAT-CCG 288
consensus_11198#3      TGCTCAACTTGTATGTCCATAGAATAGCAACAGCATGTTTTTAAGTTTGGTCCAACTGTA 172
                       ** * ** * *    *   *  **  * *   *  *     *     *     **     

consensus_11198#2      CGTTTAT---AAATGAGTTGACGANCAATTTTAAGACTAGGATAACCCCAAGCGACGTAC 224
consensus_11198#4      CGTTTAT---AAATGAGTTGACGAACA--------------------------------- 207
consensus_11198#1      CGTTTAT---AAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTAC 329
consensus_11198#0      CGTTTAT---AAATGAGTTGACGAACAATTTTAAGACTAGGATAACCCCAAGCGACGTAC 345
consensus_11198#3      TATTTTTTTTGTACAAGGTCCTCAACGCATATTATCCCAAGATGTCCAAGTTTGTTTTGA 232
                         *** *     *  ** *    * *                                  

consensus_11198#2      GGNTCAATTANTCGAAGCATGTTAAGAGTTGCCTTANTTAATCGCACCAACATCCCGTTG 284
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      GGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTG 389
consensus_11198#0      GGATCAATTATTCGAAGCATGTTAAGAGTTGCCTTATTTAATAGCACAAACATCCCGTTG 405
consensus_11198#3      AT---------------------------------------------------------- 234
                                                                                   

consensus_11198#2      TTGATTTTCCGG------------------------------------------------ 296
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      TTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTA 449
consensus_11198#0      TTGATTTGCCGGAGGCGAAACAGTTGCATAGTCTTTCTTGGGCGTGGGTGGACACCGTTA 465
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      ATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCC 509
consensus_11198#0      ATACCCCGGATTCGCACGACAAACGCGAGTTTTGGTTCAGCTGGAACATAGAAGTCTCCC 525
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      GTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGC 569
consensus_11198#0      GTCTTCTTAGCATTACGCTGCAACGTCATTTCCCGCTTTGCCATTCTGCGGTACTCATGC 585
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      ATGTATTTTTCCGCTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGT 629
consensus_11198#0      ATGTATTTTTCCGCTCTTTGCTTCATGAGAGACTTTAACTTCATATAAGTCTGTCGGCGT 645
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      ATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGG 689
consensus_11198#0      ATCACCTTTTTGCGAGCTACTGTAATCAATTTTCGTCGTCTAATCTTTTCCTTCACGCGG 705
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      AGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACG 749
consensus_11198#0      AGACCTTCTGGCTTCCTAGGTCTCTTAGGAGTAGCTGACTGAGTATCAGTTTTTTTTACG 765
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------------------------------------
consensus_11198#4      ------------------------------------------------------------
consensus_11198#1      TCCGAGCCCTCGTGCCGAATTTTTGGCCTCGG---------------------------- 781
consensus_11198#0      TCCGACATGATCTGTTCACGATGGCACCTAACAGATATTAAACTGTCACGCTGTAGATTC 825
consensus_11198#3      ------------------------------------------------------------
                                                                                   

consensus_11198#2      ------------------------------
consensus_11198#4      ------------------------------
consensus_11198#1      ------------------------------
consensus_11198#0      AAAGACACAAACAGGCGCCAGGCAGAGGTA 855
consensus_11198#3      ------------------------------
                                                     




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)