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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11286#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 744 fasta sequence
[GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTTACTTGTTTCAATATACT]
[+] EMBL CD111076 [GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATACGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGG ]
[+] EMBL CD098449 [GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGG ]
[+] EMBL CD111563 [nGCACTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGACGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATNATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGG ]
[-] EMBL CD111249 [ GCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGATTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGT ]
[-] EMBL CD111234 [ GCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGT ]
[+] EMBL CD079116 [ TGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTNCTCCTCCACCTCCACCGNCTCCTGGATATCGTTGAGATGCCATCTGATTCATGGTATCTATCCTAGAT ACCACTTATCATCTCTGAGAAGTTNTGTAAAAGCATTTACTTGNNTCAATATAC ]
[+] EMBL AW017454 [ TTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCATCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGCGCGACTGCGACGAGTTTCGCCAGGTCAAAAACATGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGGTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTACATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTCAAGCCATTGACTGGGATTGCTGGCCGACGCGGGATGCCCCTTGCAACCCCAGCAGCAACAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTAGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTACTGGCATGCCACCTGCACCTTCTACCACGA ]
[-] EMBL CD170757 [ GTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTG ]
[+] EMBL CD180626 [ CAACTATGCCTGTTAATAACAATGCACAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTGTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCC ]
[-] EMBL CD073844 [ TAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTAACTTGTTTCAATATACT]
[-] EMBL CD073568 [ GAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCNTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTTTGATGCAACCACGAGCACTTTNTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTTACTTGTTTCAATATACT]
[-] EMBL CD076899 [ ccaACTTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCTTCTTGGATATCGTTGAGATGCAATGTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTTACTTGTTTCAATATACT]
consensusID : consensus_11286#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 721 fasta sequence
[AGGCCAANAATTTGGCACGAGGTTCGGTTTAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT-CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTNTGTAAAAGCATTTACTTGTTTCATATAC]
[+] EMBL CD079582 [AGGCCAANAATTTGGCACGAGGTTCGGTTTAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTNTGTAAAAGCATTTACTTGTTTCATATAC]
[-] EMBL CD180602 [ AACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGAGGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGT ]
[+] EMBL CD159321 [ ATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAGACAAGGCAGCAAAGCAGGA ]
[+] EMBL CD126626 [ CCAGCATGT ATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGGCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGC ]
[-] EMBL CD126657 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACT GA TTAAGC TGAAT GTA TGCTGT ]
[-] EMBL CD126639 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC GACGC GTATGCCCCGT CAACTCCAca ]
[-] EMBL CD126631 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATATAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC GACGCGta ]
[-] EMBL CD126628 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGG ]
[-] EMBL CD166386 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTCCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTTTTTTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCCCCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCG ]
[-] EMBL CD126659 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCACCCTACAGCAGGCGCTTGGTCAACTGGAGCTAAGCCATTGACTGGTATTGCTGTCGGACGCG ]
[-] EMBL CD126600 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC GACGCG ]
[-] EMBL CD063906 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCGGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACT GTA TGCTGTCGGACGCGG ]
[+] EMBL CD178056 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTCCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCCGCT CCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC ]
[+] EMBL CD178050 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATG AT TAAT TGGCGCGGCGGCNACGAG TTCCCCGGGTC AAAACAGGGCACCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ]
[+] EMBL CD126645 [ CATG TAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTG ]
[+] EMBL CD178006 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ]
[+] EMBL CD178026 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ]
[+] EMBL CD178003 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGACGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ]
[-] EMBL CD177984 [ ATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGC ]
[+] EMBL CD144588 [ AATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGGATGCCACCTCCACCTCCTCCCCCGACA GTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGTTATCCT ]
[+] EMBL AW017284 [ AACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTTCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGACTCCTGGATATCGNTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTT ]
[+] EMBL AI976852 [ AACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTGCTGGCATGCCACCTCCACCTCCTCCCACGAGAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCAC ]
[-] EMBL CD182514 [ TCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTCCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGC ]
[+] EMBL CD178031 [ GATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCT ]
[+] EMBL CD129261 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTCGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTAC ]
[+] EMBL CD167974 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTCGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTGATTCACATCTTGCGACTGCT ]
[+] EMBL CD129270 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCATCAGCACCGGGTCTGATGCAAC ]
[+] EMBL CD129373 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGT ]
[-] EMBL CD129509 [ CAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACC ]
[-] EMBL CD129589 [ CAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTA ]
[-] EMBL CD129426 [ CAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACG ]
[-] EMBL CD191126 [ TGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCACCca ]
[-] EMBL CD185874 [ GCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCNTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACC ]
[+] EMBL CD144638 [ GAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTCCGAGGGTAACCTCCTCCTCCACCTCCACC ]
consensusID : consensus_11286#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 308 fasta sequence
[CAAGGAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCAGGGTACCGAGGTCG]
[-] EMBL CD168194 [CAAGGAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCAGGGTACCGAGGTCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11286#0 GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCC 60
consensus_11286#1 --------------------AGGCCAANAATTTGGCACGAGGTTCGGTTT-AACTATGCC 39
consensus_11286#2 ------------------------------------------------------------
consensus_11286#0 TGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCA 120
consensus_11286#1 TGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCA 99
consensus_11286#2 ------------------------------------------------------------
consensus_11286#0 AGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATT 180
consensus_11286#1 AGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATT 159
consensus_11286#2 ------------------------------------------------------------
consensus_11286#0 GTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCG 240
consensus_11286#1 GTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCG 219
consensus_11286#2 ------------------------------------------------------------
consensus_11286#0 GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAA 300
consensus_11286#1 GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAA 279
consensus_11286#2 -CAAGGAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAA 59
**** ******************************************************
consensus_11286#0 TGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGC 360
consensus_11286#1 TGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGC 339
consensus_11286#2 TGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGC 119
************************************************************
consensus_11286#0 TTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGC 420
consensus_11286#1 TTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGC 399
consensus_11286#2 TTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGC 179
************************************************************
consensus_11286#0 AACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGG 480
consensus_11286#1 AACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGG 459
consensus_11286#2 AACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGG 239
************************************************************
consensus_11286#0 AGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCC 540
consensus_11286#1 AGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCC 519
consensus_11286#2 AGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCAGGGTA 299
*******************************************************
consensus_11286#0 ACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTAC 600
consensus_11286#1 ACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTAC 579
consensus_11286#2 CCGAGGTCG--------------------------------------------------- 308
* **
consensus_11286#0 CGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGC 660
consensus_11286#1 CGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGC 639
consensus_11286#2 ------------------------------------------------------------
consensus_11286#0 AATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAA 720
consensus_11286#1 AATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTNTGTAAA 699
consensus_11286#2 ------------------------------------------------------------
consensus_11286#0 AGCATTTACTTGTTTCAATATACT 744
consensus_11286#1 AGCATTTACTTGTTTCA-TATAC- 721
consensus_11286#2 ------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||