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Schistosoma mansoni
cluster # 11366 cluster # 11366       Sequences # 59       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11366#0 length = 619 sequences # 22  
consensus_11366#1 length = 596 sequences # 28  
consensus_11366#2 length = 535 sequences # 2  
consensus_11366#3 length = 353 sequences # 3  
consensus_11366#4 length = 347 sequences # 1  
consensus_11366#5 length = 274 sequences # 2  
consensus_11366#6 length = 237 sequences # 1  

consensusID : consensus_11366#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 22
consensus length = 619
fasta sequence
                              [GAGCCATATTCGGCACGAGGCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG-ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT-GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA-GAAAATGGAGAGTTTAGGTTCCACAAGT-GGAAAGCCGTCCAAG-AAAATTATAATCGA-AGATTGTGGA-GAATGTTAAATATCTT-TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA-T-ATAAAATCGTCGTTGCAGTAAAAAAAAAAAAATAAAAA]

[+] EMBL CD081661             [GAGCCATATTCGGCACGAGGCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCG                             ]
[+] EMBL SMCYC                [                                      TCAAAAATGGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCG                             ]
[+] EMBL CD136795             [                                              GGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTA                                                                       ]
[+] EMBL BF936909             [                                                      AAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCG                             ]
[-] EMBL AW017153             [                                                       AGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCGT                            ]
[+] EMBL BF936461             [                                                                         GGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCG                             ]
[+] EMBL CD180375             [                                                                                          TGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAGCTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGT GTGAA GAAAATGGAG                                                                                                                                                                  ]
[-] EMBL CD140268             [                                                                                                     ATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAG                                                                                                                                                                ]
[-] EMBL CD188272             [                                                                                                     ATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAACCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT G                                                                                                                                              ]
[-] EMBL CD136720             [                                                                                                              CTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTAT                                                                      ]
[-] EMBL CD117800             [                                                                                                                          GTTCCAGATACTACTAGACACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTA                                                                                                                                                            ]
[-] EMBL CD137277             [                                                                                                                                                                                GGTTACAAAGGTTCTGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTAT                                                                      ]
[-] EMBL CD137191             [                                                                                                                                                                                GGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTAT                                                                      ]
[-] EMBL CD116505             [                                                                                                                                                                                                              ATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTA                                                                                                                                                            ]
[-] EMBL CD135979             [                                                                                                                                                                                                                            GTGTCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTA                                                                                                                                                            ]
[-] EMBL BG931761             [                                                                                                                                                                                                                               TCAGGGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAc                                                                                                                                           ]
[-] EMBL CD135076             [                                                                                                                                                                                                                                   GGTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAA                                                                                                                     ]
[-] EMBL CD155877             [                                                                                                                                                                                                                                    GTGGCGATTTCACCAATGGCG ATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGTGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATT                                                                                                                         ]
[+] EMBL SM600                [                                                                                                                                                                                                                                                CCAATGGNGNATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCANAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGNCCCTNGTGCGTGGCTTGACGGCAANCATGTTGGTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAAGGAAAATGGAGAGTTTAGGTTCCACAAGTGGGAAAGCCGTCCAAGAAAAATTATAATCGACGGATTGTGGAGGAATGTTANATATCTTNNATTACATATGTATGTTATAATCTATGAAACTTATTNGGCGTATT TTAAAATCGgc                           ]
[+] EMBL SMAA18480            [                                                                                                                                                                                                                                                                                            ATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA TAATAAATTCGTCGTTGCAG                    ]
[-] EMBL AI740236             [                                                                                                                                                                                                                                                                                                                                                                                                                    CGGCAAACATGTT GTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTT CACAAGT GGAAAGCCGTCCAAG AAAATTATAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTAMGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCGT                            ]
[-] EMBL AI394859             [                                                                                                                                                                                                                                                                                                                                                                                                                                            acacagcCAGTGGCATAGACGTGGTGAA GAAAATGGAGAGTTTAGGTTCCACAAGT GGAAAGCCGTCCAAG AAAATTCTAATCGA AGATTGTGGA GAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTA T ATAAAATCGTCGTTGCAGTAAAAAAAAAAAAATAAAAA]


>consensus_11366#0 GAGCCATATTCGGCACGAGGCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGT TTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATG ATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTT ACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCA CCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACT TCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATG GTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTT TCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCACAA GTGGAAAGCCGTCCAAGAAAATTATAATCGAAGATTGTGGAGAATGTTAAATATCTTTAT TACATATGTATGTTATAATCTATGAAACTTATTTGGCGTATATAAAATCGTCGTTGCAGT AAAAAAAAAAAAATAAAAA



consensusID : consensus_11366#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 28
consensus length = 596
fasta sequence
                              [CACTGTTTGCATGTTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA-TTAAGGCCGGTG-ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG-TTTT-CCACCGAATAATTCCAGG-CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG-ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGCCAGTGGNATAGACGTGGTGAAAGAAAATGGAGAGTTTAGGTNCCACAAGTGGAAAGCCGCCCCANGAAAAATTNTTCTCGAAGATTGTGGAGCAATTGTNAANTNTCTTNATTACATATGTNNTGTNATTAATCTTATGAANACTTTATTGGGGN]

[-] EMBL CD187212             [CACTGTTTGCATGTTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGG                                                                                                                                                                    ]
[-] EMBL CD187496             [         CATGTTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGG                                                                                                                                                                    ]
[+] EMBL CD190842             [         CATGTTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCAC                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD188604             [          ATGTTCAGCTAAATTGACTGGCGGTGACCATACATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTGTTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAAT                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD126557             [             TTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGGTGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAAC                                                                                                                                                                                 ]
[+] EMBL SMAA18458            [                              GTGGTGACCATCCATTTCAAAAATGGCTGCGAAANCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGACAGGGTGGCGATTTCACCAATGG                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AA958321             [                                   GACCATCCATTTC AAAATGGCTGCGAAA CGTTTTCCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCA                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD202701             [                                     CCATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCC                                                                                                                                                                                                        ]
[+] EMBL CD126467             [                                       ATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAAAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACTGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACCCCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAAC                                                                                                                                                                                 ]
[+] EMBL CD126546             [                                       ATCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAAC                                                                                                                                                                                 ]
[-] EMBL CD126528             [                                        TCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACA                                                                                                                                                                                ]
[-] EMBL CD126492             [                                        TCCATTTCAAAAATGACTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG GTGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACA                                                                                                                                                                                ]
[-] EMBL CD126497             [                                        TCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGGAAAAGTATATACGGAAATAAATTCAAAGATGAGATCTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACA                                                                                                                                                                                ]
[-] EMBL CD063718             [                                        TCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTC TTATTACTACTGTCCCTTGTTCGTGGC TGACGGCAAACATGTTGTTTT                                                                                                                                                                       ]
[-] EMBL CD142873             [                                                         TGCGAAAGCGTTTTTCGATA TTAAGGCCGGTG ATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATT                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD142852             [                                                                  GTTTTCTGATATTTAAGGCCGTTG AAAACCGATTGGGGAGGATTATATTGAAGCTATTCAATGAAGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTT CCACCGAATAATTCCAGGCCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAG                                                                                                                                                               ]
[+] EMBL AA559682             [                                                                                       GTGTATGAACGATTGGGGAGGATTATATCTGANCTATTCAATGATGTTCCANATACTACTAGAANCTTNCGCGAGTTATGCACTCACAAAAATAATTTTGGTTACAAAGGTNCCG TTTN CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCNATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACNCGAAGCGTTCTCACTTTCAATGGCCAATGCGGGAACCTA                                                                                                                                                                                                                                             ]
[-] EMBL CD121851             [                                                                                                    TGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTCCTAAGGTCCCCTGc                                                                                                                                                                                                    ]
[+] EMBL CD180348             [                                                                                                    TGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGT                                                                                                                                                              ]
[+] EMBL CD126891             [                                                                                                     GGGGAGGATTGTATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGCTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGC                                                                                                                                                                                                                                                                              ]
[+] EMBL CD166900             [                                                                                                     GGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTGAATCACAAACACGAAGC                                                                                                                                                                                                                                                                              ]
[+] EMBL CD180389             [                                                                                                        GAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCGCTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCGAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTT                                                                                                                                                                         ]
[+] EMBL CD113479             [                                                                                                              TATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCG                                                                                                                                                                     ]
[+] EMBL CD130841             [                                                                                                              TATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCAC                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD131760             [                                                                                                               ATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCG TTTT CCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTT                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD142834             [                                                                                                                       GCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGG TCCG TTTTNCCACCGAATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAG                                                                                                                                                               ]
[-] EMBL CD142779             [                                                                                                                                                                                                                       ATAATTCCAGG CTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCTCAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAG                                                                                                                                                               ]
[+] EMBL SM261                [                                                                                                                                                                                                                                                                                                 GAAATAAATTCAAAGATGAGAACTTCANTCACAAACACGACGCGTTCTCACTTTCAATGGCCAATGCGGG ACCTAACACCANTGGTNCGCAATTCTTTATTACTACTGCCCCTNGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGCCAGTGGNATAGACGTGGTGAAAGAAAATGGAGAGTTTAGGTNCCACAAGTGGAAAGCCGCCCCANGAAAAATTNTTCTCGAAGATTGTGGAGCAATTGTNAANTNTCTTNATTACATATGTNNTGTNATTAATCTTATGAANACTTTATTGGGGN]


>consensus_11366#1 CACTGTTTGCATGTTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGC GAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCT ATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAA TTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGG CGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGA TGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAA CACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACA TGTTGTTTTCGGTAAAGTCGCCAGTGGNATAGACGTGGTGAAAGAAAATGGAGAGTTTAG GTNCCACAAGTGGAAAGCCGCCCCANGAAAAATTNTTCTCGAAGATTGTGGAGCAATTGT NAANTNTCTTNATTACATATGTNNTGTNATTAATCTTATGAANACTTTATTGGGGN



consensusID : consensus_11366#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 535
fasta sequence
                              [TCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGGTAAAGTCGTCAGTGGNCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCACAAGTGGAAAGCCGTCCAAGAAATTATATCGAGATGTGAGATGTAATACTTATACTAGAGTNANCAGACTATGGCGNNNAAAACBCGCG]

[+] EMBL BF440129             [TCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGGTAAAGTCGTCAGTGGNCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCACAAGTGGAAAGCCGTCCAAGAAATTATATCGAGATGTGAGATGTAATACTTATACTAGAGTNANCAGACTATGGCGNNNAAAACBCGCG]
[-] EMBL CD126331             [                                                                                                                                                 accCAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAACTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACA                                                                                                                                                            ]


>consensus_11366#2 TCCATTTCAAAAATGGCTGCGAAAGCGTTTTTCGATATTAAGGCCGGTGATGAACGATTG GGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCAGT TATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAG GCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGATGGCACGGGTGGAAAAAGTATAT ACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAA TGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTT CGTGGCTTGACGGCAAACATGTTGTTTTCGGGTAAAGTCGTCAGTGGNCATAGACGTGGT GAAGAAAATGGAGAGTTTAGGTTCCACAAGTGGAAAGCCGTCCAAGAAATTATATCGAGA TGTGAGATGTAATACTTATACTAGAGTNANCAGACTATGGCGNNNAAAACBCGCG



consensusID : consensus_11366#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 353
fasta sequence
                              [CCTCCAGGCCAAAAATTCGGCACGAGGAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTC-TTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCACAAGTGGAAAGCCGTCCAAGAAAATTATAATCGAAGATTGTGGAGAATGTTAAATATCTTTATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTATATAAAATCG]

[+] EMBL CD080223             [CCTCCAGGCCAAAAATTCGGCACGAGGAAAGTATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTC TTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCACAAGTGGAAAGCCGTCCAAGAAAATTATAATCGAAGATTGTGGAGAATGTTAAATATCTTTATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTATATAAAATCG]
[+] EMBL CD069029             [                                ATATACGGAAATAAATTCAAAGATGAGAACTTCAATCACAAACACTTGTAGTTATCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAATTC TTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGTCAGTGGCTTATACGTGGT                                                                                                                                           ]
[+] EMBL AI764842             [                                                                               AGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATGGTTCGCAAATCTTTTATTACTACTGTCCCCTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCCGTAAAGTCGTCAGTGGCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCACAAGTGGAAAGCCGTCCNAGAAAATTATAATCGAAGATTGTGGA                                                                     ]


>consensus_11366#3 CCTCCAGGCCAAAAATTCGGCACGAGGAAAGTATATACGGAAATAAATTCAAAGATGAGA ACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCA ATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTG TTTTCGGTAAAGTCGTCAGTGGCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCA CAAGTGGAAAGCCGTCCAAGAAAATTATAATCGAAGATTGTGGAGAATGTTAAATATCTT TATTACATATGTATGTTATAATCTATGAAACTTATTTGGCGTATATAAAATCG



consensusID : consensus_11366#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 347
fasta sequence
                              [AAAAAAAACGTCGAGACTAGTTCACGGTGGTAACATCCATTTCAAAAATCGGCTAGCGAAACGGTTATTTCGATATTAAGGCCGCTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTCGGTTACAAAGGTTCCGTTTGCCACCGAATGAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGGATGACACTGGGTAGAAAAAGTATATACGGAAATAAATTCACAGATGAGACTCCACTCGATAAAAAGGAAGCGTTCTCACTCGAATGGCAA]

[+] EMBL AW053295             [AAAAAAAACGTCGAGACTAGTTCACGGTGGTAACATCCATTTCAAAAATCGGCTAGCGAAACGGTTATTTCGATATTAAGGCCGCTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTCGGTTACAAAGGTTCCGTTTGCCACCGAATGAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCACCAATGGCGGATGACACTGGGTAGAAAAAGTATATACGGAAATAAATTCACAGATGAGACTCCACTCGATAAAAAGGAAGCGTTCTCACTCGAATGGCAA]


>consensus_11366#4 AAAAAAAACGTCGAGACTAGTTCACGGTGGTAACATCCATTTCAAAAATCGGCTAGCGAA ACGGTTATTTCGATATTAAGGCCGCTGATGAACGATTGGGGAGGATTATATTTGAGCTAT TCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATT TCGGTTACAAAGGTTCCGTTTGCCACCGAATGAATTCCAGGCTTCATGTGTCAGGGTGGC GATTTCACCAATGGCGGATGACACTGGGTAGAAAAAGTATATACGGAAATAAATTCACAG ATGAGACTCCACTCGATAAAAAGGAAGCGTTCTCACTCGAATGGCAA



consensusID : consensus_11366#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 274
fasta sequence
                              [ACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAACGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCT]

[+] EMBL CD089870             [ACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAACGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGTCGTCAGTGGCATAGACGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCT]
[-] EMBL CD148210             [                                                                                                                                                                 ATTTGAGCTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTACAAAGGTTCCGTTTTCCACCGAATAA         ]


>consensus_11366#5 ACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAACGGTTCGCAATT CTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAAGT CGTCAGTGGCATAGACGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATGAT GTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTTAC AAAGGTTCCGTTTTCCACCGAATAATTCCAGGCT



consensusID : consensus_11366#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 237
fasta sequence
                              [CAACTCACTTTCAATGGCCAATGCGGGACTAACACCAATGGTTCGCAATTCTTATTACTACTGNCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAGTCTCAGTGGCATANACTGGTGAANAAAATGGAGATTTAGGTTCACAAGTGGAAACCGTCCAAGAAAATTATATCGAAGATGTGGAGATGTTAAATATCTTATTACATATGTTGTCATAATCTATGGAAACT]

[+] EMBL AW466236             [CAACTCACTTTCAATGGCCAATGCGGGACTAACACCAATGGTTCGCAATTCTTATTACTACTGNCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAGTCTCAGTGGCATANACTGGTGAANAAAATGGAGATTTAGGTTCACAAGTGGAAACCGTCCAAGAAAATTATATCGAAGATGTGGAGATGTTAAATATCTTATTACATATGTTGTCATAATCTATGGAAACT]


>consensus_11366#6 CAACTCACTTTCAATGGCCAATGCGGGACTAACACCAATGGTTCGCAATTCTTATTACTA CTGNCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTTTCGGTAAGTCTCAGTGGCATAN ACTGGTGAANAAAATGGAGATTTAGGTTCACAAGTGGAAACCGTCCAAGAAAATTATATC GAAGATGTGGAGATGTTAAATATCTTATTACATATGTTGTCATAATCTATGGAAACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      ------------------------------------------------------------
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      GAGCCATATTCGGCACGAGGCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGT 60
consensus_11366#2      ---------------------------------TCCATTTCAAAAATGGCTGCGAAAGCG 27
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      ------------------------------------------------------------
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      TTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAATG 120
consensus_11366#2      TTTTTCGATATTAAGGCCGGTGATGAACGATTGGGGAGGATTATATTTGAGCTATTCAAT 87
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      ------------------------------------------------------------
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAATAATTTTGGTT 180
consensus_11366#2      GATGTTCCAGATACTACTAGAAACTTTCGCAGTTATGCACTCACAAGAATAATTTTGGTT 147
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      ------------------------------------------------------------
consensus_11366#3      ---------------------------------------------------------CCT 3
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCA 240
consensus_11366#2      ACAAAGGTTCCGTTTTCCACCGAATAATTCCAGGCTTCATGTGTCAGGGTGGCGATTTCA 207
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      ------------------------------------------------------------
consensus_11366#3      CCAGGCCAAAAATTCGGCACGAGGAAAGTATATACGGAAATAAATTCAAAGATGAGAACT 63
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      CCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACT 300
consensus_11366#2      CCAATGGCGATGGCACGGGTGGAAAAAGTATATACGGAAATAAATTCAAAGATGAGAACT 267
                                                                                   

consensus_11366#4      --------------------------------------------------AAAAAAAACG 10
consensus_11366#5      ----------ACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAACG 50
consensus_11366#1      -----------------------------------------------CACTGTTTGCATG 13
consensus_11366#3      TCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATG 123
consensus_11366#6      -------------------CAACTCACTTTCAATGGCCAATGCGGGAC-TAACACCAATG 40
consensus_11366#0      TCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATG 360
consensus_11366#2      TCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGACCTAACACCAATG 327
                                                                                * *

consensus_11366#4      -TCGAGACTAGTTCACGGTGGTAACATCCATTTCAAAAATCGGCTAGCGAAACGGTTATT 69
consensus_11366#5      GTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTT 110
consensus_11366#1      TTCAGCTAAATTGACCGGTGGTGACCATCCATTTCAAAAATGGCTGCGAAAGCGTT--TT 71
consensus_11366#3      GTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTT 183
consensus_11366#6      GTTCGCAATTCTT-ATTACTACTGNCC-TTGTTCGTGGCTTGACGGCAAACATGTTGTTT 98
consensus_11366#0      GTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTT 420
consensus_11366#2      GTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGCAAACATGTTGTTT 387
                        *         *                   **        * *     *   * *  **

consensus_11366#4      TCGA-TA------TTAAGGCC-GC-----TGATGAACGATTGGGGAGGATTATATTTGAG 116
consensus_11366#5      TCGG-TAAAGTCGTCAGTGGC-ATAGACGTGATGAACGATTGGGGAGGATTATATTTGAG 168
consensus_11366#1      TCGA-TA------TTAAGGCC-GG-----TGATGAACGATTGGGGAGGATTATATTTGAG 118
consensus_11366#3      TCGG-TAAAGTCGTCAGTGGC-ATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCAC 241
consensus_11366#6      TCGG-TAA-GTC-TCAGTGGC-ATANAC-TGGTGAANAAAATGGAGA-TTTAGGTTC-AC 151
consensus_11366#0      TCGG-TAAAGTCGTCAGTGGC-ATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCAC 478
consensus_11366#2      TCGGGTAAAGTCGTCAGTGGNCATAGACGTGGTGAAGAAAATGGAGAGTTTAGGTTCCAC 447
                       ***  **      * *  *          ** ****  *   **     ***  **  * 

consensus_11366#4      CTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAAT 176
consensus_11366#5      CTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAAT 228
consensus_11366#1      CTATTCAATGATGTTCCAGATACTACTAGAAACTTTCGCGAGTTATGCACTCACAAGAAT 178
consensus_11366#3      AAGTGGAAAGCCGTCCAAGAAAATTATAA------TCGAAGATTGTGGAGAATGTTAAAT 295
consensus_11366#6      AAGTGGAAA-CCGTCCAAGAAAATTATA-------TCGAAGAT-GTGGAGA-TGTTAAAT 201
consensus_11366#0      AAGTGGAAAGCCGTCCAAGAAAATTATAA------TCGAAGATTGTGGAGAATGTTAAAT 532
consensus_11366#2      AAGTGGAAAGCCGTCCAAGAAA-TTATA-------TCGA-GAT-GTG-AGA-TGT--AAT 493
                          *  **    ** * *** * *  **       ***    *  ** *        ***

consensus_11366#4      AATTTCGGTTACAAAGGTTCCGTTTGCCACCGAATGAATTCCAGGCTTCATGTGTCAGGG 236
consensus_11366#5      AATTTTGGTTACAAAGGTTCCGTTTTCCACCGAAT-AATTCCAGGCT------------- 274
consensus_11366#1      AATTTTGGTTACAAAGGTTCCGTTTTCCACCGAAT-AATTCCAGGCTTCATGTGTCAGGG 237
consensus_11366#3      A-TCTTTATTACA-TATGTATGTTATAATCTATGAAACTTATTTGGCGTATATAAAATCG 353
consensus_11366#6      A-TCTT-ATTACA-TATGT-TGTCATAATCTATGGAAACT-------------------- 237
consensus_11366#0      A-TCTTTATTACA-TATGTATGTTATAATCTATGAAACTTATTTGGCGTATATAAAATCG 590
consensus_11366#2      A-CTTATACTAGAGTNANCAGACTATGGCGNNNAAAACBCGCG----------------- 535
                       *   *    ** *                       *                       

consensus_11366#4      TGGCGATTTCACCAATGGCGGATGACACTGGGTAGAAAAAGTATATACGGAAATAAATTC 296
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      TGGCGATTTCACCAATGGCGATGGCA--CGGGTGGAAAAAGTATATACGGAAATAAATTC 295
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      TCGTTGCAGTAAAAAAAAAAAAATAAAAA------------------------------- 619
consensus_11366#2      ------------------------------------------------------------
                                                                                   

consensus_11366#4      ACAGATGAGACTCCACTCGATAAAAAGGAAGCGTTCTCACTCGAATGGCAA--------- 347
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      AAAGATGAGAACTTCAATCACAAACACGAAGCGTTCTCACTTTCAATGGCCAATGCGGGA 355
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ------------------------------------------------------------
consensus_11366#2      ------------------------------------------------------------
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      CCTAACACCAATGGTTCGCAATTCTTTATTACTACTGTCCCTTGTTCGTGGCTTGACGGC 415
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ------------------------------------------------------------
consensus_11366#2      ------------------------------------------------------------
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      AAACATGTTGTTTTCGGTAAAGTCGCCAGTGGNATAGACGTGGTGAAAGAAAATGGAGAG 475
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ------------------------------------------------------------
consensus_11366#2      ------------------------------------------------------------
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      TTTAGGTNCCACAAGTGGAAAGCCGCCCCANGAAAAATTNTTCTCGAAGATTGTGGAGCA 535
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ------------------------------------------------------------
consensus_11366#2      ------------------------------------------------------------
                                                                                   

consensus_11366#4      ------------------------------------------------------------
consensus_11366#5      ------------------------------------------------------------
consensus_11366#1      ATTGTNAANTNTCTTNATTACATATGTNNTGTNATTAATCTTATGAANACTTTATTGGGG 595
consensus_11366#3      ------------------------------------------------------------
consensus_11366#6      ------------------------------------------------------------
consensus_11366#0      ------------------------------------------------------------
consensus_11366#2      ------------------------------------------------------------
                                                                                   

consensus_11366#4      -
consensus_11366#5      -
consensus_11366#1      N 596
consensus_11366#3      -
consensus_11366#6      -
consensus_11366#0      -
consensus_11366#2      -
                        




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)