Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 1517 cluster # 1517       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1517#0 length = 670 sequences # 2  

consensusID : consensus_1517#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 670
fasta sequence
                              [TAAACTTTACTTATTTTATTTCTCTATTTTACAATAGAATTTAAATGGAATCAAATGCATTGAAGATATGAGTTACTTTACCACTTGAATATGTCTATGACTCATTAACAAAAGAGAAGTGGATTAAATAATTAAGCCTGTTTATCTTTGATCAAAATGTGAAATGTAAATAATGATGAAAAATTCTTAATGTGACGAAACAAAAAGAAAAATAATAACATAATACCATAGAGAATATTGACATATAACATGGATAGGGAAATGAGCTACGAATAATAGGATTAATCAAATAGTATTACTCTTCTTCAATAGAATATTTATTTTATTTCAAATGAAAAATTATTATTCATATAAAAATAAATATCTTCTATCAAAAATAGTTTTTAGTAGACAATGAATTCTCTTGATGGATTTACATTACAGTAAAGTACACTCTTTGGGATTAGTTACTCTGCAGTTTTTTCTTGAAAAAAATGTGAAGTATGTAATTAGAATTTTTGGAACAGAAAAAGGTGAAGTTTTAATTGAAACTAAGTTTACTAGTCTAAAAAGGATTTAAATAGGAATCGAAATTTCTCAACACAGAGACGACAGTACACTCACTGAGAAACCAGTATCAACTCCTCTTAAAATCAGTGTTGACTGAACTTGTCACCTTATTACTATTGAT]

[-] EMBL CD185299             [TAAACTTTACTTATTTTATTTCTCTATTTTACAATAGAATTTAAATGGAATCAAATGCATTGAAGATATGAGTTACTTTACCACTTGAATATGTCTATGACTCATTAACAAAAGAGAAGTGGATTAAATAATTAAGCCTGTTTATCTTTGATCAAAATGTGAAATGTAAATAATGATGAAAAATTCTTAATGTGACGAAACAAAAAGAAAAATAATAACATAATACCATAGAGAATATTGACATATAACATGGATAGGGAAATGAGCTACGAATAATAGGATTAATCAAATAGTATTACTCTTCTTCAATAGAATATTTATTTTATTTCAAATGAAAAATTATTATTCATATAAAAATAAATATCTTCTATCAAAAATAGTTTTTAGTAGACAATGAATTCTCTTGATGGATTTACATTACAGTAAAGTACACTCTTTGGGATTAGTTACTCTGCAGT                                                                                                                                                                                                                    ]
[+] EMBL CD077261             [                                                                                                                                      AGCCTGTTTATCTTTGATCAAAATGTGAAATGTAAATAATGATGAAAAATTCTTAATGTGACGAAACAAAAAGAAAAATAATAACATAATACCATAGAGAATATTGACATATAACATGGATAGGGAAATGTGCTACGAATAATAGGATTAATCAAATAGTATTACTCTTCTTCAATAGAATATTTATTTTATTTCAAATGAAAAATTATTATTCATATAAAAATAAATATCTTCTATCAAAAATAGTTTTTAGTAGACAATGAATTCTCTTGATGGATTTACATTACAGTAAAGTACACTCTTTGGGATTAGTTACTCTGCAGTTTTTTCTTGAAAAAAATGTGAAGTATGTAATTAGAATTTTTGGAACAGAAAAAGGTGAAGTTTTAATTGAAACTAAGTTTACTAGTCTAAAAAGGATTTAAATAGGAATCGAAATTTCTCAACACAGAGACGACAGTACACTCACTGAGAAACCAGTATCAACTCCTCTTAAAATCAGTGTTGACTGAACTTGTCACCTTATTACTATTGAT]


>consensus_1517#0 TAAACTTTACTTATTTTATTTCTCTATTTTACAATAGAATTTAAATGGAATCAAATGCAT TGAAGATATGAGTTACTTTACCACTTGAATATGTCTATGACTCATTAACAAAAGAGAAGT GGATTAAATAATTAAGCCTGTTTATCTTTGATCAAAATGTGAAATGTAAATAATGATGAA AAATTCTTAATGTGACGAAACAAAAAGAAAAATAATAACATAATACCATAGAGAATATTG ACATATAACATGGATAGGGAAATGAGCTACGAATAATAGGATTAATCAAATAGTATTACT CTTCTTCAATAGAATATTTATTTTATTTCAAATGAAAAATTATTATTCATATAAAAATAA ATATCTTCTATCAAAAATAGTTTTTAGTAGACAATGAATTCTCTTGATGGATTTACATTA CAGTAAAGTACACTCTTTGGGATTAGTTACTCTGCAGTTTTTTCTTGAAAAAAATGTGAA GTATGTAATTAGAATTTTTGGAACAGAAAAAGGTGAAGTTTTAATTGAAACTAAGTTTAC TAGTCTAAAAAGGATTTAAATAGGAATCGAAATTTCTCAACACAGAGACGACAGTACACT CACTGAGAAACCAGTATCAACTCCTCTTAAAATCAGTGTTGACTGAACTTGTCACCTTAT TACTATTGAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)