cluster # 4479

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Schistosoma mansoni
cluster # 4479 cluster # 4479 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4479#0 length = 500 sequences # 3

consensusID : consensus_4479#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 500
fasta sequence

                              [CAAACATGTATTTAATTAATAGACAGTAAATTTGTACAATTAACTGTTTTTCTGTAAAAAAATGTTTGCTGGTATAAAGACAGTTTAGTTAACGACCATATGTATATTTAGTTACGTACTTTTTTGCGTAATACGTAAAAGTCTGGACATAAAAATCTCATAACGAACCTTTAAGAAATATTTACACATGAAAAGCAGAAGTTAGTGAACGTAAATAATTGGAAGTTGAGATGCTTTGGAAGACTACTTTATCACGCAAAGAAACTGTTAATGCTTTTGGGCACTTTTAATCCGTTCTAGTCTTCGTTTCAAGTCCATTAACTCAGTGGTGGACATGGTAGGCCTTTGTTCTGTTTCAGGTTGAGTATTTTCATCTGGAGAATCACCATTTGGTTGAACCATATTTCGAAGAGTTGTTTCAAAAGCTGTATTTTGTATTCCAGCTTCATCAGATGACCCAATATTATCATCCATGTTAGTTGTGGATACACCACCAAGAC]

[+] EMBL AI976739             [CAAACATGTATTTAATTAATAGACAGTAAATTTGTACAATTAACTGTTTTTCTGTAAAAAAATGTTTGCTGGTATAAAGACAGTTTAGTTAACGACCATATGTATATTTAGTTACGTACTTTTTTGCGTAATACGTAAAAGTCTGGACATAAAAATCTCATAACGAACCTTTAAGAAATATTTACACATGAAAAGCAGAAGTTAGTGAACGTAAATAATTGGAAGTTGAGATGCTTTGGAAGACTACTTTATCACGCAAAGAAACTGTTAATGCTTTTGGGCACTTTTAATCCGTTCTAGTCTTCGTTTCAAGTCCATTAACTCAGTGGTGGACATGGTAGGCCTTTGTTCTGTTTCAAGTTGAGTATTTTCATCTGGAGAATCACCATTTGGTTGAACCATATTTCGAAGAGTTGTTTCAAAAGCTGTATTTTGTATTCCAGCTTCATCAGATGACCCAATATTATCATCCATGTTAGTTGTGGATACACCA       ]
[+] EMBL CD169703             [                                                                                                                                                                                                        gcTAGTGAACGTAAATAATTGGAAGTTGAGATGCTTTGGAAGACTACTTTATCACGCAAAGAAACTGTTAATGCTTTTGGGCACTTTTAATCCGTTCTAGTCTTCGTTTCAAGTCCATTAACTCAGTGGTGGACATGGTAGGCCTTTGTTCTGTTTCAGGTTGAGTATTTTCATCTGGAGAATCACCATTTGGTTGAACCATATTTCGAAGAGTTGTTTCAAAAGCTGTATTTTGTATTCCAGCTTCATCAGATGACCCNATATTATCATC                             ]
[-] EMBL CD134243             [                                                                                                                                                                                                                                                                                                                   TTCAAGTCCATTAACTCAGTGGTGGACATGGTAGGCCTTTGTTCTGTTTCAGGTTGAGTATTTTCATCTGGAGAATCACCATTTGGTTGAACCATATTTCGAAGAGTTGTTTCAAAAGCTGTATTTTGTATTCCAGCTTCATCAGATGACCCAATATTATCATCCATGTTAGTTGTGGATACACCACCAAGAC]




>consensus_4479#0
CAAACATGTATTTAATTAATAGACAGTAAATTTGTACAATTAACTGTTTTTCTGTAAAAA
AATGTTTGCTGGTATAAAGACAGTTTAGTTAACGACCATATGTATATTTAGTTACGTACT
TTTTTGCGTAATACGTAAAAGTCTGGACATAAAAATCTCATAACGAACCTTTAAGAAATA
TTTACACATGAAAAGCAGAAGTTAGTGAACGTAAATAATTGGAAGTTGAGATGCTTTGGA
AGACTACTTTATCACGCAAAGAAACTGTTAATGCTTTTGGGCACTTTTAATCCGTTCTAG
TCTTCGTTTCAAGTCCATTAACTCAGTGGTGGACATGGTAGGCCTTTGTTCTGTTTCAGG
TTGAGTATTTTCATCTGGAGAATCACCATTTGGTTGAACCATATTTCGAAGAGTTGTTTC
AAAAGCTGTATTTTGTATTCCAGCTTCATCAGATGACCCAATATTATCATCCATGTTAGT
TGTGGATACACCACCAAGAC

clustalw multiple alignements is not computed in this case