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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4506 cluster # 4506       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4506#0 length = 925 sequences # 3  

consensusID : consensus_4506#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 925
fasta sequence
                              [GAGTCATTTGACGTAATGTGTTCCACGTAGCACATAATTGGGATGGTCGTACACAATGAAGGATAACTGATAGTATATGCCCAATGAAAGCTAGGTGAGTTATTTCCAAAAAGCGATTAAATGCAGCAACCCTATTTAACGCTATGTCAGCTTCATCTCCATTAATTGACTGAGCATGTTGCATTTCAAATATGGTATCTTCACAGAAATTAACGAAACATTCCAACTTCTCTTTATCTCCACTTTCACCAACCACAGAATGTAAAAAAGATCTCTTAGATTCTTTAATCTGTGGTGCTTCCCACTGATCAATATGCTGTTGACGTATTTCGAAGTAGACACGTTCAATTCGACCGTTTGAACCGGTAATTTCTATTCTACCTAAATGTGGTTCGAATACGTCTAGTACTCCACGAGCTTTGTCAATTAGTCTTTCCAATCTTGGATCAGATGGTACATGTTCGGATAAATTAGTCAATAATAAAGCTAAGTTGAAGCCAATATCTTCAGCTGGATTGTAGAAACGTTCTGTGAATTCTTTAAAATCAACTTTACCATCTGCATTATTATCAACACATGCAATGATATAGTTAATCCCCTCAGGTGAATAGGTTTTTTGTTGTTCTAAAGCCAGTCGAAATTCTCTATGTGAAATCCAACCATCACCATTCACATCGAAAGCTAAGAATGCTTCAGAAGTAGTGATCACTTTCATTCGAAG-GAAATATCGAANAATCTGAGAATCATCTCGACATTAGCCGAAGATTTCATTAATGTATC-ACCATTTGTTTAGCGATTGGCCCATTGTCAACATTTCCTCCAAGCATAGATAGCAGCATAATTATCGATTCTTTTTGTAAACTAAGAAATTCTCGCCATCCTTTAACTGATCAGGATCACGACTTAATTTATCTTGCATTTGTGC]

[+] EMBL CD129503             [GAGTCATTTGACGTAATGTGTTCCACGTAGCACATAATTGGGATGGTCGTACACAATGAAGGATAACTGATAGTATATGCCCAATGAAAGCTAGGTGAGTTATTTCCAAAAAGCGATTAAATGCAGCAACCCTATTTAACGCTATGTCAGCTTCATCTCCATTAATTGACTGAGCATGTTGCATTTCAAATATGGTATCTTCACAGAAATTAACGAAACATTCCAACTTCTCTTTATCTCCACTTTCACCAACCACAGAATGTAAAAAAGATCTCTTAGATTCTTTAATCTGTGGTGCTTCCCACTGATCAATATGCTGTTGACGTATTTCGAAGTAGACACGTTCAATTCGACCGTTTGAACCGGTAATTTCTATTCTACCTAAATGTGGTTCGAATACGTCTAGTACTCCACGAGCTTTGTCAATTAGTCTTTCCAATCTTGGATCAGATGGTACATGTTCGGATAAATTAGTCAATAATAAAGCTAAGTTGAAGCCAATATCTTCAGCTGGATTG                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD136609             [                                                                                                                                                                                                                                                                                                                                                                                                                          CCACGAGCTTTGTCAATTAGTCTTTCCAATCTTGGATCAGATGGTACATGTTCGGATAAATTAGTCAATAATAAAGCTAAGTTGAAGCCAATATCTTCAGCTGGATTGTAGAAACGTTCTGTGAATTCTTTAAAATCAACTTTACCATCTGCATTATTATCAACACATGCAATGATATAGTTAATCCCCTCAGGTGAATAGGTTTTTTGTTGTTCTAAAGCCAGTCGAAATTCTCTATGTGAAATCCAACCATCACCATTCACATCGAAAGCTAAGAATGCTTCAGAAGTAGTGATCACTTTCATTCGAAG GAAATATCGAANAATCTGAGAATCATCTCGACATTAGCCGAAGATTTCATTAATGTATC ACCATTTGTTTA                                                                                                                                     ]
[-] EMBL CD067671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTATTATCAACACATGCAATGATATAGTTAATCTCCTCAGGTGAATAGGTTTTTTGTTGTTCTAAAGCCAGTCGAATCTCTCTATGTGAAATCCAACCATCACCATTCACATCGAAAGCTAAGAATGCTTCAGAAGTAGTGATCACTTTCATTCGAAGCAAAATATCGAAAAATCTGAGAATCATCTCGACATTAGCCGAAGATTCAATTAATGTATCAACCATTTGTTTAGCGATTGGCCCATTGTCAACATTTCCTCCAAGCATAGATAGCAGCATAATTATCGATTCTTTTTGTAAACTAAGAAATTCTCGCCATCCTTTAACTGATCAGGATCACGACTTAATTTATCTTGCATTTGTGC]


>consensus_4506#0 GAGTCATTTGACGTAATGTGTTCCACGTAGCACATAATTGGGATGGTCGTACACAATGAA GGATAACTGATAGTATATGCCCAATGAAAGCTAGGTGAGTTATTTCCAAAAAGCGATTAA ATGCAGCAACCCTATTTAACGCTATGTCAGCTTCATCTCCATTAATTGACTGAGCATGTT GCATTTCAAATATGGTATCTTCACAGAAATTAACGAAACATTCCAACTTCTCTTTATCTC CACTTTCACCAACCACAGAATGTAAAAAAGATCTCTTAGATTCTTTAATCTGTGGTGCTT CCCACTGATCAATATGCTGTTGACGTATTTCGAAGTAGACACGTTCAATTCGACCGTTTG AACCGGTAATTTCTATTCTACCTAAATGTGGTTCGAATACGTCTAGTACTCCACGAGCTT TGTCAATTAGTCTTTCCAATCTTGGATCAGATGGTACATGTTCGGATAAATTAGTCAATA ATAAAGCTAAGTTGAAGCCAATATCTTCAGCTGGATTGTAGAAACGTTCTGTGAATTCTT TAAAATCAACTTTACCATCTGCATTATTATCAACACATGCAATGATATAGTTAATCCCCT CAGGTGAATAGGTTTTTTGTTGTTCTAAAGCCAGTCGAAATTCTCTATGTGAAATCCAAC CATCACCATTCACATCGAAAGCTAAGAATGCTTCAGAAGTAGTGATCACTTTCATTCGAA GGAAATATCGAANAATCTGAGAATCATCTCGACATTAGCCGAAGATTTCATTAATGTATC ACCATTTGTTTAGCGATTGGCCCATTGTCAACATTTCCTCCAAGCATAGATAGCAGCATA ATTATCGATTCTTTTTGTAAACTAAGAAATTCTCGCCATCCTTTAACTGATCAGGATCAC GACTTAATTTATCTTGCATTTGTGC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)