Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4763 cluster # 4763       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4763#0 length = 609 sequences # 3  

consensusID : consensus_4763#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 609
fasta sequence
                              [AACTTTTGAATTTTTGTAAATGTCGAACTCAGACTTATCAGGTCGCCATGGTG-GTGGGCTTTCAGGTGCAGCAAGCCCTGATCCAGAGGAACCCGCTTTTGAGGACGAATCCGCCGCCATACTGGGTGATGATAATCTTGATGAAGAAGAAGAATCTGGAGAGAATTTATTCGGTGACGATATGGAACGTGACTATCGTCCTATCCCGGAGCTCGATGTCTATGAGGCGGAAGGTCTTGCGGACCCCGATGAAGACCTAGAGGAATTATCACCGAATACTCGTGCTGAAGCTGAACGTGAAATGAGACGACGGGACCGTGAGCGTCTGCTTGCTACTGGTGGACTTAGACGTGATCTTATAGCCGATTTATACGGTGAGGAAGAGGAGGAAGAAATAATTCCTGCGCGCCGCAGGCGTATTGCGGAGAGAGTCGCTGCAGGTGATGAAGGTGATTTAGAACATGAGGGTGTCCTGGAAAGCATTGAGAACTTGGAGGATATGAAGGGGATGTCTGTAGTTGAATGGGTTCAACAACCTGTCACTCGTCAAGAAATCAAAAACCGTTTTAAAGCATTTCTCAGAACGTTTTTGGACGAAAACGATCGGGA]

[+] EMBL CD198122             [AACTTTTGAATTTTTGTAAATGTCGAACTCAGACTTATCAGGTCGCCATGGTG GTGGGCTTTCAGGTGCAGCAAGCCCTGATCCAGAGGAACCCGCTTTTGAGGACGAATCCGCCGCCATACTGGGTGATGATAATCTTGATGAAGAAGAAGAATCTGGAGAGAATTTATTCGGTGACGATATGGAACGTGACTATCGTCCTATCCCGGAGCTCGATGTCTATGAGGCGGAAGGTCTTGCGGACCCCGATAAAGACCTAGAGGAATTATCACCGAATACTCGTGCTGAAGCTGAACGTGAAATGAGACGACGGGACCGTGAGCGTCTGCTTGCTACTGGTGGACTTAGACGTGATCTTATAGCCGATTTATACGGTGAGGAAGAGGAGGAAGAAA                                                                                                                                                                                                                      ]
[+] EMBL CD163554             [                             CAGACTTATCAGGTCG CATGGTGTGTGGGCTTTCAGGTGCAGCAAGCCCTGATCCAGAGGAACCCGCTTTTGAGGACGAATCCGCCGCCATACTGGGTGATGATAATCTTGATGAAGAAGAAGAATCTGGAGAGAATTTATTCGGTGACGGTATGGAACGTGACTATCGTCCTATCCCGGAGCTCGATGTCTATGAGGCGGAAGGTCTTGCGGACCCCGATGAAGACCTAGAGGAATTATCACCGAATACTCGTGCTGAAGCTGAACGTGAAATGAGACGACGGGACCGTGAGCGTCTGCTTGCTACTGGTGGACTTAGACGTGATCTTATAGCCGATTTATACGGTGAGGAAGAGGAGGAAGAAATAATTCCTGCGCGCCG                                                                                                                                                                                                      ]
[+] EMBL CD149051             [                                                                                                                                                                                                                        ATGTCTATGAGGCGGAAGGTCTTGCGGACCCCGATGAAGACCTAGAGGAATTATCACCGAATACTCGTGCTGAAGCTGAACGTGAAATGAGACGACGGGACCGTGAGCGTCTGCTTGCTACTGGTGGACTTAGACGTGATTTTATAGCCGATTTATACGGTGAGGAAGAGGAGGAAGAAATAATTCCTGCGCGCCGCAGGCGTATTGCGGAGAGAGTCGCTGCAGGTGATGAAGGTGATTTAGAACATGAGGGTGTCCTGGAAAGCATTGAGAACTTGGAGGATATGAAGGGGATGTCTGTAGTTGAATGGGTTCAACAACCTGTCACTCGTCAAGAAATCAAAAACCGTTTTAAAGCATTTCTCAGAACGTTTTTGGACGAAAACGATCGGGA]


>consensus_4763#0 AACTTTTGAATTTTTGTAAATGTCGAACTCAGACTTATCAGGTCGCCATGGTGGTGGGCT TTCAGGTGCAGCAAGCCCTGATCCAGAGGAACCCGCTTTTGAGGACGAATCCGCCGCCAT ACTGGGTGATGATAATCTTGATGAAGAAGAAGAATCTGGAGAGAATTTATTCGGTGACGA TATGGAACGTGACTATCGTCCTATCCCGGAGCTCGATGTCTATGAGGCGGAAGGTCTTGC GGACCCCGATGAAGACCTAGAGGAATTATCACCGAATACTCGTGCTGAAGCTGAACGTGA AATGAGACGACGGGACCGTGAGCGTCTGCTTGCTACTGGTGGACTTAGACGTGATCTTAT AGCCGATTTATACGGTGAGGAAGAGGAGGAAGAAATAATTCCTGCGCGCCGCAGGCGTAT TGCGGAGAGAGTCGCTGCAGGTGATGAAGGTGATTTAGAACATGAGGGTGTCCTGGAAAG CATTGAGAACTTGGAGGATATGAAGGGGATGTCTGTAGTTGAATGGGTTCAACAACCTGT CACTCGTCAAGAAATCAAAAACCGTTTTAAAGCATTTCTCAGAACGTTTTTGGACGAAAA CGATCGGGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)