cluster # 4963

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Schistosoma mansoni
cluster # 4963 cluster # 4963 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4963#0 length = 562 sequences # 3

consensusID : consensus_4963#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 562
fasta sequence

                              [GATCCAACATTTGGTACACAGGTTTTCATTTATCGAATAAGAGATCACTTATTGGAAAAATTCTGTGAAATAAAGAAATTAGATAAAGATCTAGTGAAAAAAAGTCATCGAGCTATGTCTAAACTGGCTTTAGAGGCCTCAAACGTGCTTACCAAACTTAGTGCAAATTCCGAAATATTCGCCCAGGTGGAAAATTTGTTTAATGGAG----AAGATCTTAAAGTTAAAATTACTCGTGCT--G-AGATGGAAACATTTTGCTCTGATCTGTTCGAGAGAGTTAGACGACCATTTTCCGATATCATGGTCGATTTTCCAATGGAGTCATTACAACAAGTTATTTTAATGGGTGGAGGTACAAGAATCCCAAAAATTCAATCTATTCTAATCGAGCATAGTCAAAAGTCAGAATTACACAGAGGTGTTAATAGTGATGATGCTGCCGCATTGGGTGCCGTGTATCAAGCTGCATTTCATACTCCTGAGTTTCGTGTTACTCGTTTTATTGTTAAAGACTANTATCTTTATCCTATTGCTGTTGATTTTATGCGTGCTCCACCGTTACCAG]

[+] EMBL CD191699             [GATCCAACATTTGGTACACAGGTTTTCATTTATCGAATAAGAGATCACTTATTGGAAAAATTCTGTGAAATAAAGAAATTAGATAAAGATCTAGTGAAAAAAAGTCATCGAGCTATGTCTAAACTGGCTTTAGAGGCCTCAAACGTGCTTACCAAACTTAGTGCAAATTCCGAAATATTCGCCCAGGTGGAAAATTTGTTTAATGGAG    AAGATCTTAAAGTTAAAATTACTCGTGCT  G AGATGGAAACATTTTGCTCTGATCTGTTCGAGAGAGTTAGACGACCATTTTCCGATATCATGGTCGATTTTCCAATGGAGTCATTACAACAAGTTATTTTAATGGGTGGAGGTACAAGAATCCCAAAAATTCAATCTATTCTAATCGAGCATAGTCAAAAGTCAGAATTACACAGAGGTGTTAATAGTGATGATGCTGCCGCATTGGGTGCCGTGTATCAAGCTGCATTTCATACTCCTGAGTTTCGTGTTACTCGTTTTATTGTTAAAGACTANTATCTTTATCCTATTGCTGTTGATTTTATGCGTGCTCCACCGTTACCAG]
[-] EMBL CD190270             [                                                                                       GATCTAGTGAAAAANAGTCATCGAGCTATGTCTAAACTGGCTTTAGAGGCCTCAAACGTGCTTACCAAACTTAGTGCAAATTCCGAAATATTCGCCCAGGTGGAAAATTTGTTTAATGGAG    AAGATCTTAAAGTTAAAATTACTCGTGCT  G AGATGGAAACATTTTGCTCTGATCTGTTCGAGAGAGTTAGACGACCATTTTCCGATATCATGGTCGATTTTCCAATGGAGTCATTACAACAAGTTATTTTAATGGGTGGAGGTACAAGAATCCCAAAAATTCAATCTATTCTAATCGAGCATAGTCAAAAGTCAGAATTACACAGAGGTGTTAATAGTGATGATGCTGCCGCATTGGGTGCCGTGTATCAAGCTGCATTTCATACTCCTGGGTTTCGTGTTACTCGTTTTATTGTTAAAGACTATAATCTTTATCCTATTGCTGTTGATTTTATGCGTGCT             ]
[+] EMBL CD188587             [                                                                                                       aTCATCGAGCTATGTCTAAACTGGCTTTAGAGGCCTCAAACGTGCTTACCAAACTTAGTGCAAATTCCGAAATATTCGCCCAGG GG AAATTTGTTATGTAGAGANAAAATATCTTAAAGTTAAAATTACTCG GCTCGGAAGAGGAAAACATTCTGCTCTGATCTGTACGAGAGAG TAGACGACCATTTTCCGATATCATGGTCGATTTTCCAATGGAGTCATTACAACAAGTTATTTTAATGGGTGGAGGTACAAGAATCCCAAAAATTCAATCTATTCTAATCGAGCATAGTC                                                                                                                                                                        ]




>consensus_4963#0
GATCCAACATTTGGTACACAGGTTTTCATTTATCGAATAAGAGATCACTTATTGGAAAAA
TTCTGTGAAATAAAGAAATTAGATAAAGATCTAGTGAAAAAAAGTCATCGAGCTATGTCT
AAACTGGCTTTAGAGGCCTCAAACGTGCTTACCAAACTTAGTGCAAATTCCGAAATATTC
GCCCAGGTGGAAAATTTGTTTAATGGAGAAGATCTTAAAGTTAAAATTACTCGTGCTGAG
ATGGAAACATTTTGCTCTGATCTGTTCGAGAGAGTTAGACGACCATTTTCCGATATCATG
GTCGATTTTCCAATGGAGTCATTACAACAAGTTATTTTAATGGGTGGAGGTACAAGAATC
CCAAAAATTCAATCTATTCTAATCGAGCATAGTCAAAAGTCAGAATTACACAGAGGTGTT
AATAGTGATGATGCTGCCGCATTGGGTGCCGTGTATCAAGCTGCATTTCATACTCCTGAG
TTTCGTGTTACTCGTTTTATTGTTAAAGACTANTATCTTTATCCTATTGCTGTTGATTTT
ATGCGTGCTCCACCGTTACCAG

clustalw multiple alignements is not computed in this case