Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4965 cluster # 4965       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4965#0 length = 895 sequences # 3  
consensusID : consensus_4965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 895
fasta sequence 
                              [CGTCACGATGCATTACAATTAATTATGACGAGAGGAGGCGAAGACTCGTCACCTGGAGAATCTACAACTCCGGAACAACGCCAAGCTATAGCTGCTGCAAAGTCGATCGAATACTGCCGAGAAGAAGATGGTATTCGCGCGAAAAATCGTCGCCCTTTCCATCGACATCGTAGTATGAATAATTTAAATTGTAGCAAGGATTGCGATGAAGACGAAGGTGATGAAAATGCTGGTGAATTATGGCAACAGGTTATTTTATTTGCAGCGGATAAGCCTGCTTTCATATGTGCATTACTACAAAATGCAGGCTGTGAAGGTCTCGATTCACGTCTGCTACTACGTAAAATATCACCAGACATGACTATACCTGGACTTCGTGATGCAATTGTCAAGCTTATGCATGACTACAAGATTCAACTTGAACTGCAGCAAAGCTGTTCACGCATTTTGTCATCAGACATGCATCAGTTATTCTTACGTGTTATCAAAATGCAAATGAAAGGAATTCGTGTGAATCCAAGTGCTTGGTCCTCTATTGGATGTGCAGTGTGTCTGCAACCTATACTGAACAATAACGGGCAATCATGGGCGAAGTGCANATCAATCAAAATGTGATGTAAATAGTCAAAACAACGGAGAAAATCATCGGTCATGGGCAATTTTTCATTGTAATCATATTTGTCATGGAGACTGTTTATTTAATGAAGAAACGAAATGCCCTTTGTGCTCAAAATCACGTATAATATAATCCGCACTGACAATTAACAAAAGCTGTAAACCTTGTGATTTATTTTATCATTTTAATTCACAAAGGGAAAATATTCAGCAGACTATTTTTTTTAAAAGTTTGATCATTATTTTTTTCTTTCTTTTTGATATAAAAAAAAACAAATTT]

[+] EMBL CD082766             [CGTCACGATGCATTACAATTAATTATGACGAGAGGAGGCGAAGACTCGTCACCTGGAGAATCTACAACTCCGGAACAACGCCAAGCTATAGCTGCTGCAAAGTCGATCGAATACTGCCGAGAAGAAGATGGTATTCGCGCGAAAAATCGTCGCCCTTTCCATCGACATCGTAGTATGAATAATTTAAATTGTAGCAAGGATTGCGATGAAGACGAAGGTGATGAAAATGCTGGTGAATTATGGCAACAGGTTATTTTATTTGCAGCGGATAAGCCTGCTTTCATATGTGCATTACTACAAAATGCAGGCTGTGAAGGTCTCGATTCACGTCTGCTACTACGTAAAATATCACCAGACATGACTATACCTGGACTTCGTGATGCAATTGTCAAGCTTATGCATGACTACAAGATTCAACTTGAACTGCAGCAAAGCTGTTCACGCATTTTGTCATCAGACATGCATCAGTTATTCTTACGTGTTATCAAAATGCAAATGAAAGGAATTCGTGTGAATCCAAGTGCTTGGTCCTCTATTGGATGTGCAGTGTGTCTGCAACCTATACTGAACAATAACGGGCAATCATGGGCGAAGTGCANATCAATCAAAATGTGATGTAAATAG                                                                                                                                                                                                                                                                               ]
[+] EMBL CD192126             [                                                                                                                                                                                  ATAATTTAAATTGTAGCAAGGATTGCGATGAAGACGAAGGTGATGAAAATGCTGGTGAATTATGGCAACAGGTTATTTTATTTGCAGCGGATAAGCCTGCTTTCATATGTGCATTACTACAAAATGCAGGCTGTGAAGGTCTCGATTCACGTCTGCTACTACGTAAAATATCACCAGACATGACTATACCTGGACTTCGTGATGCAATTGTCAAGCTTATGCATGACTACAAGATTCAACTTGAACTGCAGCAAAGCTGTTCACGCATTTTGTCATCAGTCATGCATCAGTTATTCTTACGTGTTATCAAAATGCAAATGAAAGGAATTCGTGTGAATCCAAGTGCTTGG                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD076357             [                                                                                                                                                                                                                                                                                                                                          CTGCTACTACGTAAAATATCACCAGACATGACTATACCTGGACTTCGTGATGCAATTGTCAAGCTTATGCATGACTACAAGATTCAACTTGAACTGCAGCAAAGCTGTTCACGCATTTTGTCATCAGACATGCATCAGTTATTTTTACGTGTTATCAAAATGCAAATGAAAGGAATTCGTGTGAATCCAAGTGCTTGGTCCTCTATTGGATGTGCAGTGTGTTTGCAACCTATACTGAACAATAACGGGCAATCAT GGCGAAGTGCAAATCAATCAAAATGTGATGTAAATAGTCAAAACAACGGAGAAAATCATCGGTCATGGGCAATTTTTCATTGTAATCATATTTGTCATGGAGACTGTTTATTTAATGAAGAAACGAAATGCCCTTTGTGCTCAAAATCACGTATAATATAATCCGCACTGACAATTAACAAAAGCTGTAAACCTTGTGATTTATTTTATCATTTTAATTCACAAAGGGAAAATATTCAGCAGACTATTTTTTTTAAAAGTTTGATCATTATTTTTTTCTTTCTTTTTGATATAAAAAAAAACAAATTT]




>consensus_4965#0
CGTCACGATGCATTACAATTAATTATGACGAGAGGAGGCGAAGACTCGTCACCTGGAGAA
TCTACAACTCCGGAACAACGCCAAGCTATAGCTGCTGCAAAGTCGATCGAATACTGCCGA
GAAGAAGATGGTATTCGCGCGAAAAATCGTCGCCCTTTCCATCGACATCGTAGTATGAAT
AATTTAAATTGTAGCAAGGATTGCGATGAAGACGAAGGTGATGAAAATGCTGGTGAATTA
TGGCAACAGGTTATTTTATTTGCAGCGGATAAGCCTGCTTTCATATGTGCATTACTACAA
AATGCAGGCTGTGAAGGTCTCGATTCACGTCTGCTACTACGTAAAATATCACCAGACATG
ACTATACCTGGACTTCGTGATGCAATTGTCAAGCTTATGCATGACTACAAGATTCAACTT
GAACTGCAGCAAAGCTGTTCACGCATTTTGTCATCAGACATGCATCAGTTATTCTTACGT
GTTATCAAAATGCAAATGAAAGGAATTCGTGTGAATCCAAGTGCTTGGTCCTCTATTGGA
TGTGCAGTGTGTCTGCAACCTATACTGAACAATAACGGGCAATCATGGGCGAAGTGCANA
TCAATCAAAATGTGATGTAAATAGTCAAAACAACGGAGAAAATCATCGGTCATGGGCAAT
TTTTCATTGTAATCATATTTGTCATGGAGACTGTTTATTTAATGAAGAAACGAAATGCCC
TTTGTGCTCAAAATCACGTATAATATAATCCGCACTGACAATTAACAAAAGCTGTAAACC
TTGTGATTTATTTTATCATTTTAATTCACAAAGGGAAAATATTCAGCAGACTATTTTTTT
TAAAAGTTTGATCATTATTTTTTTCTTTCTTTTTGATATAAAAAAAAACAAATTT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)