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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4978 cluster # 4978       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4978#0 length = 828 sequences # 3  

consensusID : consensus_4978#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 828
fasta sequence
                              [TATTAAAATATACTTCAATATTGAGAAGAACTCTTTGAAATTTATTCCAGCGTATGCTCGTAGACAAATCTGACACTCTTCATGCCATCCAGGAATAGAAGATACGTCTTTAGTTGACGCTTCAACAGCTTTTAATTGATCTTGCAAATGATCCCAAACATGACTTACATTTGTAGCATTGAACCAATTATGGTTTATAGATATACAATTGGTCATATTTACAACCTGATGATACCATCCAGAAGGTACGAAAACTGCTTGCCCAGAATATTGGTCGAATACATAATACTTCACATCTTTCCTGTCTTTTATAACGGAGCGTATATCACAAGGAATTTGTCCATTAGGTAATAAGAGCTTTCTTTCTTCACCAGGAGGAAAAATCCACCAACGCTTGTGGCCAAGTATATTGGCAGACCAACTGAAAGAACGGTACACATCAGCGTGAAAAGGTGTCCACGTTCCATGACTCCCTAGATATAAAAATTTGAAGTCATCAGAGAGATCATTTCGTAGG-TCAATGGTCTCATTTAACCAATCAGAAGAAAAATATTCAAGCAACGAGAACCAACTGTTTTCTGAACTTTTCTTAAAGTAATGCCAATCTTTCAAATATAGAATGCGATCATCTTTTCCTTGAGCTTTATTATTCCAATACGAAATAAATTCTTCAACAGTGACTTCATGAACTGGATGTGTGTTGAATTCGATTACAGAACAATCAGAAACACATAATTTCTCACCTGAAAATATCACACCGATTATGATCTACCTGAAACATTTTTGAATACTTTTTTTACATCAATGAGCCCATCAGGGGATTGCCAT]

[+] EMBL CD147945             [TATTAAAATATACTTCAATATTGAGAAGAACTCTTTGAAATTTATTCCAGCGTATGCTCGTAGACAAATCTGACACTCTTCATGCCATCCAGGAATAGAAGATACGTCTTTAGTTGACGCTTCAACAGCTTTTAATTGATCTTGCAAATGATCCCAAACATGACTTACATTTGTAGCATTGAACCAATTATGGTTTATAGATATACAATTGGTCATATTTACAACCTGATGATACCATCCAGAAGGTACGAAAACTGCTTGCCCAGAATATTGGTCGAATACATAATACTTCACATCTTTCCTGTCTTTTATAACGGAGCGTATATCACAAGGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD167442             [                                                                                                                         TCAACAGCTTTTAATTGATCTTGCAAATGATCCCAAACATGACTTACATTTGTAGCATTGAACCAATTATGGTTTATAGATATACAATTGGTCATATTTACAACCTGATGATACCATCCAGAAGGTACGAAAACTGCTTGCCCAGAATATTGGTCGATTACATAATACTTCACATCTTTCCTGTCTTTTATAACGGAGCGTATATCAAAAGGAATTTGTCCATTAGGTAATAAGAGCTTTCTTTCTTCACCAGGAGGAAAAATCCACCAACGCTTGTGGCCAAGTATATTGGCAGACCAACTGAAAGAACGGTACACATCAGCGTGAAAAGGTGTCCACGTTCCATGACTCCCTAGATATAAAAATTTGAAGTCATCAGAGAGATCATTTCGTAGG TCAATGGTC                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD140568             [                                                                                                                                                                                                                                                                                                                                                                                      GAGGAAAAATCCACCAACGCTTGTGGCCAAGTATATTGGCAGACCAACTGAAAGAACGGTACACATCAGCGTGAAAAGGTGTCCACGTTCCATGACTCCCTAGATATAAAAATTTGAAGTCATCAGAGAGATCATTTCGTAGGCTCCA AAACTCATTTAACCAATCAGAAGAAAAATATTCAAGCAACGAGAACCAACTGTTTTCTGAACTTTTCTTAAAGTAATGCCAATCTTTCAAATATAGAATGCGATCATCTTTTCCTTGAGCTTTATTATTCCAATACGAAATAAATTCTTCAACAGTGACTTCATGAACTGGATGTGTGTTGAATTCGATTACAGAACAATCAGAAACACATAATTTCTCACCTGAAAATATCACACCGATTATGATCTACCTGAAACATTTTTGAATACTTTTTTTACATCAATGAGCCCATCAGGGGATTGCCAT]


>consensus_4978#0 TATTAAAATATACTTCAATATTGAGAAGAACTCTTTGAAATTTATTCCAGCGTATGCTCG TAGACAAATCTGACACTCTTCATGCCATCCAGGAATAGAAGATACGTCTTTAGTTGACGC TTCAACAGCTTTTAATTGATCTTGCAAATGATCCCAAACATGACTTACATTTGTAGCATT GAACCAATTATGGTTTATAGATATACAATTGGTCATATTTACAACCTGATGATACCATCC AGAAGGTACGAAAACTGCTTGCCCAGAATATTGGTCGAATACATAATACTTCACATCTTT CCTGTCTTTTATAACGGAGCGTATATCACAAGGAATTTGTCCATTAGGTAATAAGAGCTT TCTTTCTTCACCAGGAGGAAAAATCCACCAACGCTTGTGGCCAAGTATATTGGCAGACCA ACTGAAAGAACGGTACACATCAGCGTGAAAAGGTGTCCACGTTCCATGACTCCCTAGATA TAAAAATTTGAAGTCATCAGAGAGATCATTTCGTAGGTCAATGGTCTCATTTAACCAATC AGAAGAAAAATATTCAAGCAACGAGAACCAACTGTTTTCTGAACTTTTCTTAAAGTAATG CCAATCTTTCAAATATAGAATGCGATCATCTTTTCCTTGAGCTTTATTATTCCAATACGA AATAAATTCTTCAACAGTGACTTCATGAACTGGATGTGTGTTGAATTCGATTACAGAACA ATCAGAAACACATAATTTCTCACCTGAAAATATCACACCGATTATGATCTACCTGAAACA TTTTTGAATACTTTTTTTACATCAATGAGCCCATCAGGGGATTGCCAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)