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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5113 cluster # 5113       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5113#0 length = 1029 sequences # 3  

consensusID : consensus_5113#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1029
fasta sequence
                              [CCTGGCACGTTCATTCACCTGTGCCTTTTAGAATTCCGACTCCTAATACTTCGTTATCCAACCTTAATGTTTATGATAATTTATCTTCACAAAATAAATCATCGCCTTCTGTTATAGCTGTAGCCGCGGCGGCAGCGGCAGCAGCTGCCCTCAGTCAATCACCGTCGTCGACATCCGCTACAGCGGCAGCTGCATTTCATTCAGAGTTAATAAAAGCAGCAAATTTATATAAAATTAATAATAATTCAAATCAACAATTTTCGTCAAATCCGAATCCATGTCATCATTCCCTTAGTCATGATAATTTATTATCACTATGCACTAATAGTAGTAATCAATCATCATCCAGTACTTTACCATTGAATATTGATAATTCAATGAATATCTATAACACCGCTTCTGATAATATGACTATCGGTGGTAGTGTACATCCCTCCAACAAATCAACATCGACAAACTTACCTTCACGTTTATGTCCATTAACTGGTTCGAAATTAGATCAGTATAATTCATCAATTAATCTTCAACTAAAAACTGATAAATGACATTNTACAGACAAACACTGTACAGAATNNTCAAGTTTAGATAATGGCANNGT-AT-AATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTGGGTGAACNAAG-TGCTTCATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGGTAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAACGTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAAGTTTAGCAGTGGCTGCGGCAGTTCACTCATCAGCGTCATCATCATCATCTCCGACTCCTGCTCCTCAATTATCTTCGTTACATAATAGTAGTAGTTTATCACCAATACTATCCCGTAATAATTCAGTCGATTCAAACTTACAACATTCCATTTCATCACATCTTGATATTGTACAATCATCTTCAGTAT]

[+] EMBL CD115890             [CCTGGCACGTTCATTCACCTGTGCCTTTTAGAATTCCGACTCCTAATACTTCGTTATCCAACCTTAATGTTTATGATAATTTATCTTCACAAAATAAATCATCGCCTTCTGTTATAGCTGTAGCCGCGGCGGCAGCGGCAGCAGCTGCCCTCAGTCAATCACCGTCGTCGACATCCGCTACAGCGGCAGCTGCATTTCATTCAGAGTTAATAAAAGCAGCAAATTTATATAAAATTAATAATAATTCAAATCAACAATTTTCGTCAAATCCGAATCCATGTCATCATTCCCTTAGTCATGATAATTTATTATCACTATGCACTAATAGTAGTAATCAATCATCATCCAGTACTTTACCATTGAATATTGATAATTCAATGAATATCTATAACACCGCTTCTGATAATATGACTATCGGTGGTAGTGTACATCCCTCCAACAAATCAACATCGACAAACTTACCTTCACGTTTATGTCCATTAACTGGTTCGAAATTAGATCAGTATAATTCATCAATTAATCTTCAACTAAAAACTGATAAATGACATTNTACAGACAAACACTGTACAGAATNNTCAAGTTTAGATAATGGCANNGT AT AATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTGGGTGAACNAAG TGCTTCATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGGT AAATCAGATTCAGAAGAATATCAG TAAACCGTAG TTATTCACT                                                                                                                                                                                                                                                                      ]
[-] EMBL CD133816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATT TACAGACAAACACTTTACAGAATTTTCAAGTTTAGATAATGGCA  GTAATAAATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTTGGTGAAC AAGTTGCTTCATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGGTAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAACGTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAAGTTTAGCAGTGGCTGCGGCAGTTCACTCATCAGCGTCATCATCATCATCTCCGACTCCTGCTCCTCAATTATCTTCGTTACATAATAGTAGTAGTTTATCACCAATACTATCCCGTAATAATTCAGTCGATTCAAACTTACAACATTCCATTTCATCACATCTTGATATTGTACAATCATCTTCAGTAT]
[+] EMBL CD125574             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTACTGACTTGTCGGTAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAACGTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAAGTTT                                                                                                                                                                                         ]


>consensus_5113#0 CCTGGCACGTTCATTCACCTGTGCCTTTTAGAATTCCGACTCCTAATACTTCGTTATCCA ACCTTAATGTTTATGATAATTTATCTTCACAAAATAAATCATCGCCTTCTGTTATAGCTG TAGCCGCGGCGGCAGCGGCAGCAGCTGCCCTCAGTCAATCACCGTCGTCGACATCCGCTA CAGCGGCAGCTGCATTTCATTCAGAGTTAATAAAAGCAGCAAATTTATATAAAATTAATA ATAATTCAAATCAACAATTTTCGTCAAATCCGAATCCATGTCATCATTCCCTTAGTCATG ATAATTTATTATCACTATGCACTAATAGTAGTAATCAATCATCATCCAGTACTTTACCAT TGAATATTGATAATTCAATGAATATCTATAACACCGCTTCTGATAATATGACTATCGGTG GTAGTGTACATCCCTCCAACAAATCAACATCGACAAACTTACCTTCACGTTTATGTCCAT TAACTGGTTCGAAATTAGATCAGTATAATTCATCAATTAATCTTCAACTAAAAACTGATA AATGACATTNTACAGACAAACACTGTACAGAATNNTCAAGTTTAGATAATGGCANNGTAT AATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTGGGTGAACNAAGTGCTT CATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGG TAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAAC GTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAA GTTTAGCAGTGGCTGCGGCAGTTCACTCATCAGCGTCATCATCATCATCTCCGACTCCTG CTCCTCAATTATCTTCGTTACATAATAGTAGTAGTTTATCACCAATACTATCCCGTAATA ATTCAGTCGATTCAAACTTACAACATTCCATTTCATCACATCTTGATATTGTACAATCAT CTTCAGTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)