These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1029 fasta sequence [CCTGGCACGTTCATTCACCTGTGCCTTTTAGAATTCCGACTCCTAATACTTCGTTATCCAACCTTAATGTTTATGATAATTTATCTTCACAAAATAAATCATCGCCTTCTGTTATAGCTGTAGCCGCGGCGGCAGCGGCAGCAGCTGCCCTCAGTCAATCACCGTCGTCGACATCCGCTACAGCGGCAGCTGCATTTCATTCAGAGTTAATAAAAGCAGCAAATTTATATAAAATTAATAATAATTCAAATCAACAATTTTCGTCAAATCCGAATCCATGTCATCATTCCCTTAGTCATGATAATTTATTATCACTATGCACTAATAGTAGTAATCAATCATCATCCAGTACTTTACCATTGAATATTGATAATTCAATGAATATCTATAACACCGCTTCTGATAATATGACTATCGGTGGTAGTGTACATCCCTCCAACAAATCAACATCGACAAACTTACCTTCACGTTTATGTCCATTAACTGGTTCGAAATTAGATCAGTATAATTCATCAATTAATCTTCAACTAAAAACTGATAAATGACATTNTACAGACAAACACTGTACAGAATNNTCAAGTTTAGATAATGGCANNGT-AT-AATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTGGGTGAACNAAG-TGCTTCATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGGTAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAACGTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAAGTTTAGCAGTGGCTGCGGCAGTTCACTCATCAGCGTCATCATCATCATCTCCGACTCCTGCTCCTCAATTATCTTCGTTACATAATAGTAGTAGTTTATCACCAATACTATCCCGTAATAATTCAGTCGATTCAAACTTACAACATTCCATTTCATCACATCTTGATATTGTACAATCATCTTCAGTAT] [+] EMBL CD115890 [CCTGGCACGTTCATTCACCTGTGCCTTTTAGAATTCCGACTCCTAATACTTCGTTATCCAACCTTAATGTTTATGATAATTTATCTTCACAAAATAAATCATCGCCTTCTGTTATAGCTGTAGCCGCGGCGGCAGCGGCAGCAGCTGCCCTCAGTCAATCACCGTCGTCGACATCCGCTACAGCGGCAGCTGCATTTCATTCAGAGTTAATAAAAGCAGCAAATTTATATAAAATTAATAATAATTCAAATCAACAATTTTCGTCAAATCCGAATCCATGTCATCATTCCCTTAGTCATGATAATTTATTATCACTATGCACTAATAGTAGTAATCAATCATCATCCAGTACTTTACCATTGAATATTGATAATTCAATGAATATCTATAACACCGCTTCTGATAATATGACTATCGGTGGTAGTGTACATCCCTCCAACAAATCAACATCGACAAACTTACCTTCACGTTTATGTCCATTAACTGGTTCGAAATTAGATCAGTATAATTCATCAATTAATCTTCAACTAAAAACTGATAAATGACATTNTACAGACAAACACTGTACAGAATNNTCAAGTTTAGATAATGGCANNGT AT AATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTGGGTGAACNAAG TGCTTCATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGGT AAATCAGATTCAGAAGAATATCAG TAAACCGTAG TTATTCACT ] [-] EMBL CD133816 [ ATT TACAGACAAACACTTTACAGAATTTTCAAGTTTAGATAATGGCA GTAATAAATCAATTCATAGCGAACGACTTGTTATTCCATCGAATTCTTTTGGTGAAC AAGTTGCTTCATATGATTCACAAAGAAGACTAGGATCGTCTACATCAACACGGACTACTGACTTGTCGGTAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAACGTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAAGTTTAGCAGTGGCTGCGGCAGTTCACTCATCAGCGTCATCATCATCATCTCCGACTCCTGCTCCTCAATTATCTTCGTTACATAATAGTAGTAGTTTATCACCAATACTATCCCGTAATAATTCAGTCGATTCAAACTTACAACATTCCATTTCATCACATCTTGATATTGTACAATCATCTTCAGTAT] [+] EMBL CD125574 [ CTACTGACTTGTCGGTAAAATCAGATTCAGAAGAAAATCAGTTAAACCGTAGTTTATTCACTGATTGTTCTCAACGTGCTACAGCAGCGGCTGCTGCGGCGGCGGCTGCAGCAGCTCATGTCCATTTTCTTTCAAGTTT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||