cluster # 5193

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Schistosoma mansoni
cluster # 5193 cluster # 5193 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5193#0 length = 414 sequences # 3

consensusID : consensus_5193#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 414
fasta sequence

                              [CAAGCTTCGCACGCTCGGTACCAAAGTCTTGTTTGCAAGTTACACAATAGTGCTGCGAGCCTCCACTGTCTTAGAAAGGAGAACTGGGGAGGTAAAACATCACGAATGG--G---TCGCAGTATTTAAATGGACTTAACTCTATTGTGGGATTATCTGGATCATTTTACTGTGAGTTATGTGAAGTAGAATTCCCATCTCACAAAGCTCTTGGTTCACATCTTAATGGACGTCGACATCGAGAAAATGTTTTTATTTTTGAGTCAACTGGAGATCGTTCTTTGTTGAAGGGTAAACGTCAGGCTCAAGTAAAAGTTACTGCCAAAATACAACCGTTTCTTGATGTGTGTACTCAACCTCTAATAGGACTCAATTATATGATCGAGTATCAGTTACAGGAACTGGATGAATGTCTGTATA]

[+] EMBL SMAA28871            [CAAGCTTCGCACGCTCGGTACCAAAGTCTTGTTTGCAAGTTACACAATAGTGCTGCGAGCCTCCACTGTCTTAGAAAGGAGAACTGGGGAGGTAAAACATCACGAATGG  G   TCGCAGTATTTAAATGGACTTAACTCTATTGTGGGATTATCTGGATC                                                                                                                                                                                                                                                                 ]
[+] EMBL CD115054             [                                                                                        GAGGTAAAACATCACGAATGGTTGAAATCGCAGTATTTAAATGGACTTAACTCTATTGTGGGATTATCTGGATCATTTTACTGTGAGTTATGTGAAGTAGAATTCCCATCTCACAAAGCTCTTGGTTCACATCTTAATGGACGTCGACATCGAGAAAATGTTTTTATTTTTGAGTCAACTGGAGATCGTTCTTTGTTGAAGGGTAAACGTCAGGCTCAAGTAAAAGTTACTGCCAAAATACAACCGTTTCTTGATGTGTGTACTCAACCTCTAATAGGACTCAATTATATGATCGAGTATCAGTTACAGGAACTGGATGAATGTCTGTA  ]
[+] EMBL CD181863             [                                                                                                                                            CTATTGTGGGATTATCTGGATCATTTTACTGTGAGTTATGTGAAGTAGAATTCCCATCTCACAAAGCTCTTGGTTCACATCTTAATGGACGTCGACATCGAGAAAATGTTTTTATTTTTGAGTCAACTGGAGATCGTTCTTTGTTGAAGGGTAAACGTCAGGCTCAAGTAAAAGTTACTGCCAAAATACAACCGTTTCTTGATGTGTGTACTCAACCTCTAATAGGACTCAATTATATGATCGAGTATCAGTTACAGGAACTGGATGAATGTCTGTATA]




>consensus_5193#0
CAAGCTTCGCACGCTCGGTACCAAAGTCTTGTTTGCAAGTTACACAATAGTGCTGCGAGC
CTCCACTGTCTTAGAAAGGAGAACTGGGGAGGTAAAACATCACGAATGGGTCGCAGTATT
TAAATGGACTTAACTCTATTGTGGGATTATCTGGATCATTTTACTGTGAGTTATGTGAAG
TAGAATTCCCATCTCACAAAGCTCTTGGTTCACATCTTAATGGACGTCGACATCGAGAAA
ATGTTTTTATTTTTGAGTCAACTGGAGATCGTTCTTTGTTGAAGGGTAAACGTCAGGCTC
AAGTAAAAGTTACTGCCAAAATACAACCGTTTCTTGATGTGTGTACTCAACCTCTAATAG
GACTCAATTATATGATCGAGTATCAGTTACAGGAACTGGATGAATGTCTGTATA

clustalw multiple alignements is not computed in this case