cluster # 5345

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Schistosoma mansoni
cluster # 5345 cluster # 5345 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5345#0 length = 476 sequences # 3

consensusID : consensus_5345#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 476
fasta sequence

                              [GAATTCGACGTTATGGCGGGATAGTCAACGTAAACGTTTGTAACATTAGCAACACGGTAATATAGGGACGACCTTTAACTTGAAGTTGTTGATTAATTAATCAGCCGGTTCAATACGTTTAATTGGACAGTTTCAGTTAGTTAGAAGCTAATCGAACTGAGAATATACACGTATCTCATCGCGGGATTTATTTCAACGGCAATTCCAGCCAACTGATTGAGTTGTTCACTACACGTTTCTTTGAAGACAATGACTGATAGCAGTGAGAAACTTAAACAAATGGAGGAGGAAATGGATAGATTCGAGGCTGAGATTGCTCATCAGTCATCAGGTC-AGACACC-AAATAATATTCCAATCTCTGGCGGATTTACTTTCCCTCCTGTTACTAGCTTTATGCCTCCCCAGTTGCGTGTGCATCAAAACCCGACCAACGTCGTGCAGCCAGTTTATTCGGGGATCCTCTAGAGCAGACCATC]

[+] EMBL CD111384             [GAATTCGACGTTATGGCGGGATAGTCAACGTAAACGTTTGTAACATTAGCAACACGGTAATATAGGGACGACCTTTAACTTGAAGTTGTTGATTAATTAATCAGCCGGTTCAATACGTTTAATTGGACAGTTTCAGTTAGTTAGAAGCTAATCGAACTGAGAATATACACGTATCTCATCGCGGGATTTATTTCAACGGCAATTCCAGCCAACTGATTGAGTTGTTCACTACACGTTTCTTTGAAGACAATGACTGATAGCAGTGAGAAACTTAAACAAATGGAGGAGGAAATGGATAGATTCGAGGCTGAGATTGCTCATCAGTCATCAGGTC AGACACC AAATAATATTCCAATCTCTGGCGGATTTACTTTCCCTCCTGTTACTAGC                                                                                      ]
[-] EMBL CD111197             [  ATTCGACGTTATGGCGGGATAGTCAACGTAAACGTTTGTAACATNAGCAACACGGTAATATAGGGACGACCTTTAACTTGAAGTTGTTGATTAATTAATCAGCCGGTTCAATACGTTTAATTGGACAGTTTCAGTTAGTTAGAAGCTAATCGAACTGAGAATATACACGTATCTCATCGCGGGATTTATTTCAACGGCAATTCCAGCCAACTGATTGAGTTGTTCACTACACGTTTCTTTGAAGACAATGACTGATAGCAGTGAGAAACTTAAACAAATGGAGGAGGAAATGGATAGATTCGAGGCTGAGATTGCTCATCAGTCATCAGGTC AGACACC AAATAATATTCCAATCTCTGGCGGATTTACTTTCCCTCCTGTTACTAGCTT                                                                                    ]
[-] EMBL CD061879             [                                                                                                                                                                                                                                                                                                                                       ctAGGTCTAGACACCAAAATAATATTCCAATCTCTGGCGGATTTACTTTCCCTCCTGTTACTAGCTTTATGCCTCCCCAGTTGCGTGTGCATCAAAACCCGACCAACGTCGTGCAGCCAGTTTATTCGGGGATCCTCTAGAGCAGACCATC]




>consensus_5345#0
GAATTCGACGTTATGGCGGGATAGTCAACGTAAACGTTTGTAACATTAGCAACACGGTAA
TATAGGGACGACCTTTAACTTGAAGTTGTTGATTAATTAATCAGCCGGTTCAATACGTTT
AATTGGACAGTTTCAGTTAGTTAGAAGCTAATCGAACTGAGAATATACACGTATCTCATC
GCGGGATTTATTTCAACGGCAATTCCAGCCAACTGATTGAGTTGTTCACTACACGTTTCT
TTGAAGACAATGACTGATAGCAGTGAGAAACTTAAACAAATGGAGGAGGAAATGGATAGA
TTCGAGGCTGAGATTGCTCATCAGTCATCAGGTCAGACACCAAATAATATTCCAATCTCT
GGCGGATTTACTTTCCCTCCTGTTACTAGCTTTATGCCTCCCCAGTTGCGTGTGCATCAA
AACCCGACCAACGTCGTGCAGCCAGTTTATTCGGGGATCCTCTAGAGCAGACCATC

clustalw multiple alignements is not computed in this case